GSM3111197[Accession] - GEO DataSets - NCBI

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Items: 4

Select item 2000815531.

TSA-Seq Mapping of Nuclear Genome Organization [seq]

(Submitter supplied) We describe TSA-Seq, a new mapping method able to estimate mean chromosomal distances from nuclear speckles genome-wide and predict several Mbp chromosome trajectories between nuclear compartments without sophisticated computational modeling. Ensemble-averaged results reveal a clear nuclear lamina to speckle axis correlated with a striking spatial gradient in genome activity. This gradient represents a convolution of multiple, spatially separated nuclear domains, including two types of transcription ?hot-zones?. more...

Organism:: Homo sapiens

Type:: Other

Platforms:: GPL11154 GPL20301 GPL16791
43 Samples

Download data: BB, BED, BW

Series

Accession:: GSE81553

ID:: 200081553

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000660192.

TSA-Seq Mapping of Nuclear Genome Organization

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Other; Genome binding/occupancy profiling by genome tiling array

4 related Platforms
45 Samples

Download data: PAIR

Series

Accession:: GSE66019

ID:: 200066019

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000203013.

Illumina HiSeq 4000 (Homo sapiens)

Organism:: Homo sapiens

8146 Series
187027 Samples

Platform

Accession:: GPL20301

ID:: 100020301

Select item 3031111974.

input for "RNA Pol II TSA-Seq Condition 1 (TSA only)"

Organism:: Homo sapiens

Source name:: bone marrow

Platform:: GPL20301
Series:: GSE66019 GSE81553

Sample

Accession:: GSM3111197

ID:: 303111197

SRA Run Selector

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GSM3111197[Accession] (4)
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