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Items: 3

1.

Super cChIP-seq, a robust and universal epigenetic profiling method using 10 cells

(Submitter supplied) ChIP-seq is the standard technique to characterize the genome-wide epigenomic modifications, which requires millions of cells as starting material. Although some methods have recently reported to be suitable for epigenomic profiling with a small number of cells, there are still no methods capable of profiling both histone modifications and DNA methylation with extremely low input. Here, we developed a new method by supplementing carrier materials of chemically modified epigenetic markers and dUPT-containing DNA fragments during ChIP procedures. more...
Organism:
Mus musculus; Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL13112 GPL11154
32 Samples
Download data: BW
Series
Accession:
GSE136578
ID:
200136578
2.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
3.

K562_H3K4me3_1K_cells_super_cChIP-seq_Rep1

Organism:
Homo sapiens
Source name:
K562
Platform:
GPL11154
Series:
GSE136578
Download data: BW
Sample
Accession:
GSM4051759
ID:
304051759
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db=gds|term=GSM4051759[Accession]|query=1|qty=3|blobid=MCID_666ebde86e9d376f235e7942|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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