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Items: 1 to 20 of 33

1.

Regional Centromere Configuration in the Fungal Pathogens of Pneumocystis Genus

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Pneumocystis carinii; Pneumocystis murina
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
4 related Platforms
35 Samples
Download data: BED, BEDGRAPH, BROADPEAK, BW, NARROWPEAK
Series
Accession:
GSE255275
ID:
200255275

PubMed Full text in PMC Similar studies

2.

DNA methylation analysis in Pneumocystis carinii using bisulfite sequencing

(Submitter supplied) Pneumocystis carinii bisulfite_seq
Organism:
Pneumocystis carinii
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL34166
1 Sample
Download data: BEDGRAPH
Series
Accession:
GSE255176
ID:
200255176

3.

Characterizing Pneumocystis carinii centromeres with ChIP-seq (pc_210506)

(Submitter supplied) Pneumocystis is a relevant genetic system to study centromere formation in relation with host adaptation. How centromeres are formed and maintained in strongly host adapted fungal pathogens is poorly investigated. Centromeres are genomic regions that coordinate accurate chromosomal segregation during mitosis and meiosis. Yet, despite their essential function, centromeres evolve rapidly across eukaryotes. more...
Organism:
Pneumocystis carinii
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL33206
4 Samples
Download data: BW, NARROWPEAK
Series
Accession:
GSE232357
ID:
200232357

4.

Characterizing Pneumocystis carinii centromeres with ChIP-seq (pc_210927)

(Submitter supplied) Pneumocystis is a relevant genetic system to study centromere formation in relation with host adaptation. How centromeres are formed and maintained in strongly host adapted fungal pathogens is poorly investigated. Centromeres are genomic regions that coordinate accurate chromosomal segregation during mitosis and meiosis. Yet, despite their essential function, centromeres evolve rapidly across eukaryotes. more...
Organism:
Pneumocystis carinii
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL33206
8 Samples
Download data: BW, NARROWPEAK
Series
Accession:
GSE232355
ID:
200232355

5.

Characterizing Pneumocystis carinii centromeres with ChIP-seq III

(Submitter supplied) Pneumocystis is a relevant genetic system to study centromere formation in relation with host adaptation. How centromeres are formed and maintained in strongly host adapted fungal pathogens is poorly investigated. Centromeres are genomic regions that coordinate accurate chromosomal segregation during mitosis and meiosis. Yet, despite their essential function, centromeres evolve rapidly across eukaryotes. more...
Organism:
Pneumocystis carinii
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL33206
3 Samples
Download data: BW, NARROWPEAK
Series
Accession:
GSE232225
ID:
200232225

6.

Characterizing Pneumocystis carinii centromeres with ChIP-seq II

(Submitter supplied) Pneumocystis is a relevant genetic system to study centromere formation in relation with host adaptation. How centromeres are formed and maintained in strongly host adapted fungal pathogens is poorly investigated. Centromeres are genomic regions that coordinate accurate chromosomal segregation during mitosis and meiosis. Yet, despite their essential function, centromeres evolve rapidly across eukaryotes. more...
Organism:
Pneumocystis carinii
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL33206
4 Samples
Download data: BW, NARROWPEAK
Series
Accession:
GSE230598
ID:
200230598

PubMed Full text in PMC Similar studies

7.

Characterizing Pneumocystis carinii centromeres with ChIP-seq

(Submitter supplied) Pneumocystis is a relevant genetic system to study centromere formation in relation with host adaptation. How centromeres are formed and maintained in strongly host adapted fungal pathogens is poorly investigated. Centromeres are genomic regions that coordinate accurate chromosomal segregation during mitosis and meiosis. Yet, despite their essential function, centromeres evolve rapidly across eukaryotes. more...
Organism:
Pneumocystis carinii
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL33206
4 Samples
Download data: BED, NARROWPEAK
Series
Accession:
GSE226536
ID:
200226536

PubMed Full text in PMC Similar studies

8.

Illumina HiSeq 2500 (Pneumocystis carinii)

Organism:
Pneumocystis carinii
2 Series
1 Sample
Download data
Platform
Accession:
GPL34166
ID:
100034166

9.

HiSeq X Ten (Pneumocystis carinii)

Organism:
Pneumocystis carinii
6 Series
23 Samples
Download data
Platform
Accession:
GPL33206
ID:
100033206

10.

B5M

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL34166
Series:
GSE255176 GSE255275
Download data: BEDGRAPH
Sample
Accession:
GSM8065411
ID:
308065411

SRA Run Selector

11.

PC1, 210506, PcN (Input)

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL33206
Series:
GSE232357 GSE255275
Download data: BW
Sample
Accession:
GSM7329373
ID:
307329373

SRA Run Selector

12.

PC1, 210506, PcC

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL33206
Series:
GSE232357 GSE255275
Download data: BW, NARROWPEAK
Sample
Accession:
GSM7329372
ID:
307329372

SRA Run Selector

13.

PC1, 210506, PcH

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL33206
Series:
GSE232357 GSE255275
Download data: BW, NARROWPEAK
Sample
Accession:
GSM7329371
ID:
307329371

SRA Run Selector

14.

PC1, 210506, PcA

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL33206
Series:
GSE232357 GSE255275
Download data: BW, NARROWPEAK
Sample
Accession:
GSM7329370
ID:
307329370

SRA Run Selector

15.

PC2, 210927, Pc_H3K4me2

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL33206
Series:
GSE232355 GSE255275
Download data: BW, NARROWPEAK
Sample
Accession:
GSM7329365
ID:
307329365

SRA Run Selector

16.

PC2, 210927, Pc_H3K9me3

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL33206
Series:
GSE232355 GSE255275
Download data: BW, NARROWPEAK
Sample
Accession:
GSM7329364
ID:
307329364

SRA Run Selector

17.

PC2, 210927, Pc_H3K9me2

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL33206
Series:
GSE232355 GSE255275
Download data: BW, NARROWPEAK
Sample
Accession:
GSM7329362
ID:
307329362

SRA Run Selector

18.

PC2, 210927, Pc_Input

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL33206
Series:
GSE232355 GSE255275
Download data: BW
Sample
Accession:
GSM7329361
ID:
307329361

SRA Run Selector

19.

PC2, 210927, Pc_H4

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL33206
Series:
GSE232355 GSE255275
Download data: BW, NARROWPEAK
Sample
Accession:
GSM7329360
ID:
307329360

SRA Run Selector

20.

PC2, 210927, Pc_H3

Organism:
Pneumocystis carinii
Source name:
lungs
Platform:
GPL33206
Series:
GSE232355 GSE255275
Download data: BW, NARROWPEAK
Sample
Accession:
GSM7329359
ID:
307329359

SRA Run Selector

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db=gds|term=txid4754[Organism:exp]|query=1|qty=3|blobid=MCID_666a88e74f49d52cd2817347|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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