Similar studies for GEO DataSets (Select 200091675) - GEO DataSets

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Items: 20

Select item 2000916751.

(Submitter supplied) eCLIP control experiment on HepG2 against DDX59 For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Other

Platform:: GPL20301
1 Sample

Download data: BIGWIG, TXT

Series

Accession:: GSE91675

ID:: 200091675

PubMed Full text in PMC Similar studies ENCODE Analyze with GEO2R

Select item 2001012702.

ChIP-seq from GM12878 (ENCSR751CJG)

(Submitter supplied) For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL16791
2 Samples

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE101270

ID:: 200101270

PubMed Full text in PMC Similar studies ENCODE

Select item 2000786283.

total RNA-seq from NCI-H460 (ENCSR164OCT)

(Submitter supplied) The libraries contained in this experiment come from independent growths of cell line NCI-H460, a male large cell lung carcinoma. They are stranded PE101 Illumina Hi-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL11154
2 Samples

Download data: BIGWIG, TSV, TXT

Series

Accession:: GSE78628

ID:: 200078628

PubMed Full text in PMC Similar studies ENCODE Analyze with GEO2R

Select item 2000881024.

RAMPAGE from esophagus squamous epithelium (ENCSR201ARN)

(Submitter supplied) The library contained in this experiment come from human esophagus mucosa tissue. They are stranded PE101 Illumina Hi-Seq RAMPAGE libraries from rRNA-depleted Total RNA > 200 nucleotides in size. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL16791
1 Sample

Download data: BED, BIGBED, BIGWIG, GFF, TSV, TXT

Series

Accession:: GSE88102

ID:: 200088102

PubMed Full text in PMC Similar studies ENCODE Analyze with GEO2R

Select item 2000916145.

ChIP-seq from K562 (ENCSR263DFP)

(Submitter supplied) eGFP-PBX2 ChIP-seq on human K562 For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL11154
2 Samples

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE91614

ID:: 200091614

PubMed Full text in PMC Similar studies ENCODE

Select item 2000918646.

ChIP-seq from MCF-7 (ENCSR551ZDZ)

(Submitter supplied) MTA2 ChIP-seq on human MCF-7 For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL11154
2 Samples

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE91864

ID:: 200091864

PubMed Full text in PMC Similar studies ENCODE

Select item 2000919657.

eCLIP from K562 (ENCSR661ICQ)

(Submitter supplied) eCLIP experiment on K562 against PUM2 For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Other

Platform:: GPL16791
2 Samples

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE91965

ID:: 200091965

PubMed Full text in PMC Similar studies ENCODE Analyze with GEO2R

Select item 2000928218.

ChIP-seq from A549 (ENCSR666BEY)

(Submitter supplied) JunB ChIP-seq on A549 cell line treated with 100 nM dexamethasone for 7 hours. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL16791
3 Samples

Download data: BED, BIGWIG, TXT

Series

Accession:: GSE92821

ID:: 200092821

PubMed Full text in PMC Similar studies

Select item 2000964079.

ChIP-seq from ACC112 (ENCSR836XKP)

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL16791
3 Samples

Download data: TXT

Series

Accession:: GSE96407

ID:: 200096407

PubMed Full text in PMC Similar studies ENCODE

Select item 20009641510.

ChIP-seq from liver (ENCSR847DIT)

(Submitter supplied) Chip-Seq on MAX-human For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL11154
2 Samples

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE96415

ID:: 200096415

PubMed Full text in PMC Similar studies ENCODE

Select item 20025800011.

Control ChIP-seq from whole organism (ENCSR709XYX)

(Submitter supplied) This is the ChIP-seq control of transgenic worms expressing SWSN-7-eGFP fusion proteins. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Caenorhabditis elegans

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL18245
1 Sample

Download data: BIGWIG, TXT

Series

Accession:: GSE258000

ID:: 200258000

PubMed Full text in PMC Similar studies modENCODE

Select item 20010532012.

ChIP-seq from K562 (ENCSR143CEO)

(Submitter supplied) ZC3H8 ChIP-seq on human K562 For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL11154
2 Samples

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE105320

ID:: 200105320

PubMed Full text in PMC Similar studies ENCODE

Select item 20012710913.

CRISPRi RNA-seq from K562 (ENCSR299HUJ)

(Submitter supplied) RNA-seq on K562 cells treated by CRISPR interference targeting NRF1. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL20301
3 Samples

Download data: BIGWIG, TSV, TXT

Series

Accession:: GSE127109

ID:: 200127109

PubMed Full text in PMC Similar studies ENCODE Analyze with GEO2R

Select item 20017030414.

ATAC-seq from gastrocnemius medialis (ENCSR308HPZ)

(Submitter supplied) ATAC-seq on human gastrocnemius medialis For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL11154
1 Sample

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE170304

ID:: 200170304

PubMed Full text in PMC Similar studies ENCODE

Select item 20017736815.

shRNA RNA-seq from K562 (ENCSR473KFO)

(Submitter supplied) RNA-seq on K562 cells treated with an shRNA knockdown against UTP3. (UTP3-BGKLV38-D) For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL16791
2 Samples

Download data: BIGWIG, TSV, TXT

Series

Accession:: GSE177368

ID:: 200177368

PubMed Full text in PMC Similar studies ENCODE Analyze with GEO2R

Select item 20017784516.

Mint-ChIP-seq from CD14-positive monocyte (ENCSR821CPA)

(Submitter supplied) H3K27ac Mint-ChIP-seq on human CD14-positive monocyte For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL16791
2 Samples

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE177845

ID:: 200177845

PubMed Full text in PMC Similar studies ENCODE

Select item 20018742417.

Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCSR395IUF)

(Submitter supplied) H3K9me3 Mint-ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (42 years) For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL18573
2 Samples

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE187424

ID:: 200187424

PubMed Full text in PMC Similar studies ENCODE

Select item 20020901018.

TF ChIP-seq from middle frontal area 46 (ENCSR757DFT)

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL18573
2 Samples

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE209010

ID:: 200209010

PubMed Full text in PMC Similar studies ENCODE

Select item 20023108919.

TF ChIP-seq from HepG2 (ENCSR853BYT)

(Submitter supplied) ChIP-Seq on HepG2 For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL24676
2 Samples

Download data: BED, BIGBED, BIGWIG, TXT

Series

Accession:: GSE231089

ID:: 200231089

PubMed Full text in PMC Similar studies ENCODE

Select item 20025670420.

Histone ChIP-seq from BLaER1 (ENCSR197KBA)

(Submitter supplied) H3K27me3 ChIP-Seq on BLaER1 cell line after 72 h treatment with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf