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Links from GEO DataSets

Items: 20

1.
Full record GDS2914

Caffeine effect: time course and dose response

Analysis of cells treated with a low dose of caffeine at 2 mM or a high one at 20 mM for 5 , 15, or 90 minutes. Caffeine is a natural purine analogue that elicits pleiotropic effects leading to cell death. Results provide insight into the mechanism of action of caffeine.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, log ratio, 3 agent, 2 dose, 3 time sets
Platform:
GPL3250
Series:
GSE4049
36 Samples
Download data
DataSet
Accession:
GDS2914
ID:
2914
2.

Time-course studies of three cell wall interfering drugs on gene expression in yeast

(Submitter supplied) Caffeine is a natural purine analog that elicits pleiotropic effects, which ultimately lead to cell death by a mechanism that is still largely uncharacterized. This drug can activate the PKC1-MAPK cell integrity pathway, as shown by phosphorylation of Mpk1 kinase. However, and contrary to expectation, the caffeine-induced hyperphosphorylation of Mpk1 was accompanied by a negligible activation of its downstream targets Rlm1 and SBF transcription factors, which suggested that the fortification of the cell wall induced by caffeine was independent on the MAP kinase activation. more...
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Dataset:
GDS2914
Platform:
GPL3250
36 Samples
Download data
Series
Accession:
GSE4049
ID:
200004049
3.

Characterization of sensor-specific stress response by transcriptional profiling of wsc1 and mid2 deletion strains and chimeric sensors in Saccharomyces cerevisiae

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
32 Samples
Download data: GPR
Series
Accession:
GSE22458
ID:
200022458
4.

mid2 mutant 4 hour exposure to Congo Red

(Submitter supplied) We did transcription profiling on the effect of mid2 deletion, gene involved in cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
2 Samples
Download data: GPR
Series
Accession:
GSE22425
ID:
200022425
5.

Wsc1 mutant 4 hour exposure to Congo Red

(Submitter supplied) We did transcription profiling on the effect of wsc1 deletion, gene involved in cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
4 Samples
Download data: GPR
Series
Accession:
GSE22424
ID:
200022424
6.

WSC1extMID2cyt strain 2 hour exposure to caspofungin

(Submitter supplied) We did transcription profiling on the effect of wsc1 deletion, gene involved in cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
3 Samples
Download data: GPR
Series
Accession:
GSE22422
ID:
200022422
7.

MID2extWSC1cyt strain 2 hour exposure to caspofungin

(Submitter supplied) We did transcription profiling on the effect of wsc1 deletion, gene involved in cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
3 Samples
Download data: GPR
Series
Accession:
GSE22419
ID:
200022419
8.

mid2 mutant 2 hour exposure to caspofungin

(Submitter supplied) We did transcription profiling on the effect of wsc1 deletion, gene involved in cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
4 Samples
Download data: GPR
Series
Accession:
GSE22414
ID:
200022414
9.

Wsc1 mutant 2 hour exposure to caspofungin

(Submitter supplied) We did transcription profiling on the effect of wsc1 deletion, gene involved in cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
2 Samples
Download data: GPR
Series
Accession:
GSE22413
ID:
200022413
10.

Wild type 2 hour exposure to caspofungin

(Submitter supplied) We did transcription profiling on the effect of wsc1 deletion, gene involved in cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
4 Samples
Download data: GPR
Series
Accession:
GSE22412
ID:
200022412
11.

sho1 mutant 3 hour exposure to zymolyase

(Submitter supplied) We did transcription profiling on the effect of sho1 deletion, gene involved in cell osmotic stress and cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
2 Samples
Download data: GPR
Series
Accession:
GSE22408
ID:
200022408
12.

mid2 mutant 3 hour exposure to zymolyase

(Submitter supplied) We did transcription profiling on the effect of mid2 deletion, gene involved in cell osmotic stress and cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
4 Samples
Download data: GPR
Series
Accession:
GSE22407
ID:
200022407
13.

wsc1 mutant 3 hour exposure to zymolyase

(Submitter supplied) We did transcription profiling on the effect of wsc1 deletion, gene involved in cell osmotic stress and cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
4 Samples
Download data: GPR
Series
Accession:
GSE22403
ID:
200022403
14.

hog1, slt2, rlm1, and msn2/4 mutants exposed to zymolyase

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
18 Samples
Download data: GPR
Series
Accession:
GSE12684
ID:
200012684
15.

msn2/4 mutant 3 hour exposure to zymolyase

(Submitter supplied) We did transcription profiling on the effect of msn2 msn4 deletion, genes involved in several stress process Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
2 Samples
Download data: GPR
Series
Accession:
GSE9934
ID:
200009934
16.

rlm1 mutant 3 hour exposure to zymolyase

(Submitter supplied) We did transcription profiling on the effect of rlm1 deletion, gene involved in cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
4 Samples
Download data: GPR
Series
Accession:
GSE9933
ID:
200009933
17.

slt2 mutant 3 hour exposure to zymolyase

(Submitter supplied) We did transcription profiling on the effect of slt2 deletion, gene involved in cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
4 Samples
Download data: GPR
Series
Accession:
GSE9932
ID:
200009932
18.

hog1 mutant 3 hour exposure to zymolyase

(Submitter supplied) We did transcription profiling on the effect of hog1 deletion, gene involved in cell osmotic stress and cell wall stress response Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
4 Samples
Download data: GPR
Series
Accession:
GSE9931
ID:
200009931
19.

Wild type 3 hour exposure to zymolyase

(Submitter supplied) We did transcription profiling on the effect of Zymolyase in Saccharomyces cerevisiae using strains BY4741 (wild type). Yeast cells exposed to Zymolyase in YPD growth medium show a significant induction of cell wall compensatory mechanism. Keywords: cell wall stress response
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL7054
4 Samples
Download data: GPR
Series
Accession:
GSE9930
ID:
200009930
20.

wild type two hours exposure to zymolyase

(Submitter supplied) S. cerevisiae was grown on YEPD. For Zymolyase experiments, yeast cells were grown overnight at 24 °C to an optical density 0.8 - 1 (A600). The culture was refreshed to 0.2 O.D and grown at 24 °C for 2h 30min. Next, culture was divided into two parts. One continues growing under same conditions (non-treated culture) while the other was supplemented with 5units/ml Zymolyase 100T . Cells were collected at 2 hours of growth, frozen at -80 °C and processed for RNA extraction. more...
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL764
4 Samples
Download data
Series
Accession:
GSE966
ID:
200000966
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