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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones


FISH chr: FISH data source:
Clone distributor:
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Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
10 RP11-180C18 C 10p15.3(FHCRC)
chr10 1Mb   SHGC-2022    
10 RP11-10D13 CR 10p15.2~15.3(FHCRC)
10p15.3d~15.3c(NCI)
chr10 0Mb AL589988.7 SHGC-1079 B72753.1 T7,
B72752.1 SP6
 
10 CTA-391H9 R 10p15(CSMC)
chr10 8Mb   WI-4224    
10 CTB-17L11 R 10p15(CSMC)
chr10 2Mb   AFMC012XC1    
10 CTB-49O1 R 10p15(CSMC)
chr10 1Mb   D10S559    
10 CTB-49P15 R 10p15(CSMC)
chr10 4Mb   D10S552    
10 RP11-111O7 C 10p15(FHCRC)
chr10 1Mb   SHGC-2048    
10 RP11-23O12 CR 10p15(FHCRC)
10p15.2a(NCI)
chr10 3Mb AC025102.3*u SHGC-11812, AA013481 AQ014403.1 ,
AQ014400.1
 
10 RP11-59D4 C 10p15(FHCRC)
chr10 4Mb   SHGC-3841 AQ199831.1 ,
AQ199827.1
 
10 RP11-69N2 C 10p15(FHCRC)
chr10 0Mb   SHGC-533 AQ266891.1 SP6  
10 RP11-6H14 C 10p15(FHCRC)
chr10 2Mb   SHGC-17481 B49424.1 T7,
B49423.1*u SP6
 
10 RP11-118K6 S 10p14~15.3(SC)
chr10 3Mb AL731533.8 stSG4169 AQ347212.1 SP6,
AQ347711.1 T7
 
10 RP11-319P18 S 10p14~15.3(SC)
chr10 9Mb   AFM154YB4    
10 RP11-5N23 RS 10p14~15.3(SC)
10p15.1d(NCI)
chr10 6Mb AC010956.12,
AL158043.14
SHGC-37357 B49311.1 SP6,
B49312.1 T7
 
10 RP11-42I17 C 10p14~15.1(FHCRC)
chr10 8Mb   SHGC-20587 AQ058873.1 ,
AQ052703.1*u
 
10 RP11-337F21 S 10p13~15.1(SC)
chr10 17Mb AL731551.9 stSG69827    
10 RP11-197K17 C 10p14(FHCRC)
chr10 8Mb   SHGC-10769    
10 RP11-29D1 C 10p14(FHCRC)
chr10 8Mb   SHGC-17466    
10 RP11-33J8 C 10p14(FHCRC)
chr10 7Mb   SHGC-20585 AQ044988.1  
10 RP11-35I11 C 10p14(FHCRC)
chr10 8Mb   SHGC-1044, SHGC-1044*u AQ046467.1  
10 RP11-5B23 C 10p14(FHCRC)
chr10 6Mb   SHGC-37357 B49173.1 T7  
10 RP11-72C6 C 10p14(FHCRC)
chr10 7Mb   SHGC-33903 AQ267111.1 SP6  
10 RP11-77O20 C 10p14(FHCRC)
chr10 5Mb   SHGC-36813*d AQ282974.1 SP6,
AQ283424.1*d T7
multiple_placements_on_genome
10 RP11-77O20 C 10p14(FHCRC)
chr10 5Mb   SHGC-36813 AQ283424.1 T7,
AQ282974.1*d SP6
multiple_placements_on_genome
10 RP11-85M7 C 10p14(FHCRC)
chr10 6Mb   SHGC-211, SHGC-211*u AQ281959.1 T7  
10 CTB-45O18 R 10p14~13(CSMC)
chr10 16Mb   AFM079ZA9    
10 CTB-48L14 R 10p14~13(CSMC)
chr10 14Mb   D10S1664    
10 RP11-31E15 C 10p13~14(FHCRC)
chr10 11Mb   SHGC-32335    
10 RP11-89C21 S 10p13~14(SC)
chr10 11Mb AL590416.4 stSG30138 AQ281864.1 T7  
10 RP11-99O22 C 10p13~14(FHCRC)
chr10 12Mb   SHGC-3933    
10 RP11-394I23 S 10p12.31~14(SC)
chr10 15Mb AL590439.12 WI-13843    
10 RP11-11L13 C 10p13(FHCRC)
chr10 11Mb   SHGC-30300 B75616.1 T7,
B75615.1*u SP6
 
10 RP11-22K18 C 10p13(FHCRC)
chr10 14Mb   SHGC-3363 AQ009400.1 SP6,
B86305.1 T7
 
10 RP11-40D12 C 10p13(FHCRC)
chr10 13Mb   SHGC-33538    
10 RP11-61P15 C 10p12.3~13(FHCRC)
chr10 13Mb   SHGC-1024 AQ196219.1 ,
AQ196216.1
 
10 RP11-782K2 S 10p12.3~13(SC)
      stbA663L1SP6*u AQ458167.1*u T7  
10 CTB-41B10 R 10p12~13(CSMC)
chr10 18Mb   AFMB290YC1    
10 CTB-54C16 R 10p13~12(CSMC)
chr10 20Mb   D10S595    
10 RP11-19L14 C 10p12~13(FHCRC)
chr10 15Mb   SHGC-20590 B83011.1 T7,
AQ003287.1 SP6
 
10 RP11-458D17 S 10p12.1~13(SC)
chr9 22Mb AC060232.6 stSG71339    
10 RP11-14A8 C 10p12.3(FHCRC)
chr10 22Mb   SHGC-3893    
10 RP11-18B14 C 10p12.3(FHCRC)
chr10 21Mb   SHGC-34521 B82848.1 T7  
10 RP11-230A13 C 10p12.3(FHCRC)
chr10 21Mb   SHGC-5900    
10 RP11-34I5 C 10p12.2~12.3(FHCRC)
chr10 21Mb   SHGC-34123 AQ045564.1 ,
AQ045565.1
 
10 CTB-1I15 R 10p12(CSMC)
chr10 23Mb   AFMA204XE1    
10 RP11-16O1 CR 10p12(FHCRC)
10p12.33b(NCI)
chr10 17Mb AL139238.13 AA485996 B75515.1 SP6  
10 RP11-20I6 C 10p12(FHCRC)
chr10 25Mb AL354976.11 SHGC-2028 B83838.1 T7  
10 RP11-22B24 C 10p12(FHCRC)
chr10 18Mb   SHGC-12453 B86130.1 SP6  
10 RP11-25E5 C 10p12(FHCRC)
chr10 18Mb AL353603.8 SHGC-30313 B82074.1 T7,
B82073.1 SP6
 
10 RP11-43K6 C 10p12(FHCRC)
chr10 21Mb   SHGC-33568 AQ199518.1 ,
AQ199517.1
 
10 RP11-60J16 C 10p12(FHCRC)
chr10 20Mb   SHGC-37336, SHGC-37336*u AQ199684.1 ,
AQ199680.1
 
10 RP11-66F24 C 10p12(FHCRC)
chr10 22Mb   SHGC-30672, SHGC-13375 AQ196093.1 ,
AQ237675.1 T7
 
10 RP11-80J20 C 10p12(FHCRC)
chr10 18Mb   SHGC-30313 AQ317787.1 SP6,
AQ284134.1 T7
 
10 RP11-89I20 C 10p12(FHCRC)
chr10 27Mb   SHGC-36745, SHGC-715*u AQ282912.1 T7,
AZ517214.1 SP6,
AQ282911.1 SP6
 
10 RP11-360I20 S 10p11.23~12.33(SC)
chr10 27Mb AC024606.11 stSG70368 AQ543398.1 SP6,
AQ543400.1*u T7
 
10 RP11-218D6 C 10p11.2~12(FHCRC)
chr10 28Mb AL390866.14 SHGC-33447    
10 RP11-29I13 C 10p11.2~12(FHCRC)
chr10 25Mb AC026244.2*u SHGC-2028 B87587.1 T7,
B87586.1 SP6
 
10 RP11-75N18 C 10p11.2~12(FHCRC)
chr4 7Mb   SHGC-17223*d AQ267559.1 SP6,
AQ267563.1 T7
multiple_placements_on_genome
10 RP11-75N18 C 10p11.2~12(FHCRC)
chr10 24Mb   SHGC-17223 AQ267559.1*d SP6,
AQ267563.1*d T7
multiple_placements_on_genome
10 CTB-61H20 R 10p12.2(CSMC)
chr10 18Mb   D10S548    
10 RP11-73E18 C 10p12.2(FHCRC)
chr10 22Mb   SHGC-13375 AQ285939.1 T7  
10 RP11-165A20 S 10p11.23~12.2(SC)
chr10 25Mb AL512598.11 stbA742G14T7 AQ381477.1 T7,
AQ381475.1 SP6
 
10 CTA-391F6 R 10p12.1(CSMC)
chr10 37Mb   AFM269XE5   multiple_placements_on_genome
10 CTA-391F6 R 10p12.1(CSMC)
chr10 27Mb   AFM269XE5   multiple_placements_on_genome
10 CTB-10E7 R 10p12.1(CSMC)
chr10 29Mb   AFMA346ZD5    
10 CTB-16A11 R 10p12.1(CSMC)
chr10 29Mb   AFMA346ZD5    
10 RP11-176P2 C 10p12.1(FHCRC)
chr10 24Mb   SHGC-3497 AQ414498.1 SP6  
10 RP11-200C22 C 10p12.1(FHCRC)
chr10 22Mb   SHGC-11041    
10 RP11-73J23 C 10p12.1(FHCRC)
chr10 23Mb   SHGC-5880 AQ266674.1 SP6  
10 RP11-89J6 C 10p12.1(FHCRC)
chr10 23Mb   SHGC-5880 AQ286539.1 T7,
AQ286537.1*u SP6
 
10 RP11-66P13 C 10p11.23~12.1(FHCRC)
chr10 26Mb   SHGC-240, SHGC-240*u AQ237527.1 T7,
AQ237523.1 SP6
 
10 RP11-15H10 C 10p11.2~12.1(FHCRC)
chr10 29Mb   SHGC-800 B76440.1 SP6,
B76441.1 T7
 
10 CTB-13D21 R 10p11.2(CSMC)
chr10 31Mb   AFMA056WH9    
10 CTB-13P15 R 10p11.2(CSMC)
chr10 29Mb   D10S224    
10 CTB-19O12 R 10p11.2(CSMC)
chr10 24Mb   AFMC012YC5    
10 CTB-53P16 R 10p11.2(CSMC)
      AFMA106VF5*u, D10S1639*u    
10 RP11-109N22 C 10p11.2(FHCRC)
chr10 35Mb AL592445.8 SHGC-11257, SHGC-20600 AQ350769.1 SP6,
AQ323328.1 T7
 
10 RP11-134A8 C 10p11.2(FHCRC)
chr10 35Mb AL157783.15 RH40210 AQ386826.1 T7  
10 RP11-181I11 C 10p11.2(FHCRC)
chr10 30Mb   SHGC-715    
10 RP11-18E15 C 10p11.2(FHCRC)
chr10 35Mb   SHGC-11257 B88084.1 SP6,
B88085.1*u T7
 
10 RP11-434H5 S 10p11.21~11.23(SC)
chr10 30Mb   D10S1674    
10 RP11-45L17 C 10p11.2(FHCRC)
chr10 33Mb   SHGC-11924 AQ195649.1 ,
AQ195646.1
 
10 RP11-70B16 C 10p11.2(FHCRC)
chr10 34Mb   SHGC-6637 AQ237677.1*u SP6  
10 CTB-41D20 R 10q11.2~10p11.2(CSMC)
chr10 42Mb   AFMC012XC5    
10 RP11-33I16 C 10p11.22(FHCRC)
chr10 31Mb   SHGC-5313 AQ046852.1  
10 RP11-155G16 S 10p11.1~11.22(SC)
chr10 37Mb AL389918.20 stSG12709*u AQ389175.1 T7,
AQ388744.1 SP6
 
10 RP11-20J15 CR 10q11.1~11.2(FHCRC)
10q11.21c(NCI)
chr10 44Mb AL137026.21 SHGC-2055, AA447115 B85686.1 T7,
AQ008073.1 SP6
 
10 RP11-48O11 C 10q11.1~11.2(FHCRC)
chr10 43Mb   SHGC-13425 AQ201908.1 ,
AQ201909.1*u
 
10 RP11-508N16 S 10q11.1~11.23(SC)
chr10 48Mb   stSG67508    
10 RP11-89J23 C 10q11.1~11.2(FHCRC)
chr10 43Mb   SHGC-13425 AQ284789.1 SP6,
AQ284791.1 T7
 
10 RP11-264A11 RS 10q11.1~11.23(SC)
10q21.1d(NCI)
chr10 56Mb AC051618.7 stSG72356    
10 RP11-127L3 C 10q11.2(FHCRC)
chr10 44Mb   SHGC-2055, SHGC-17213    
10 RP11-178A10 S 10q11.21~11.23(SC)
chr10 42Mb AL391099.12 SHGC-8894    
10 RP11-374G20 S 10q11.21~11.23(SC)
chr10 51Mb   stbA746L15SP6   multiple_placements_on_genome
10 RP11-374G20 S 10q11.21~11.23(SC)
chr10 51Mb   stbA746L15SP6   multiple_placements_on_genome
10 RP11-399C11 S 10q11.21~11.23(SC)
chr10 44Mb   D10S1224    
10 RP11-462F17 S 10q11.21~11.23(SC)
      SHGC-12720*u    
10 RP11-71N21 C 10q11.2(FHCRC)
chr10 51Mb   SHGC-2007 AQ268640.1 SP6  
10 RP11-80C16 C 10q11.2(FHCRC)
chr10 43Mb   SHGC-36745*u AQ282172.1 SP6,
AQ282174.1 T7
 
10 RP11-172C24 RS 10q11.21~21.1(SC)
10q11.21d(NCI)
chr10 45Mb AL512595.14 stSG46659 CL423343.1 T7,
CL423340.1 SP6,
AQ413578.1 SP6
 
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
10 RP11-27P22 C 10q11.2~21.1(FHCRC)
chr10 51Mb   SHGC-1034 B87165.1 T7  
10 RP11-319F12 S 10q11.21~21.1(SC)
chr10 54Mb AC073174.5 stSG46695    
10 RP11-319P10 S 10q11.21~21.1(SC)
chr10 97Mb AC024602.10*u SGC30780    
10 RP11-463P17 S 10q11.21~21.1(SC)
chr10 47Mb AL731561.12 stSG50329*d AQ635340.1*u SP6 multiple_placements_on_genome
10 RP11-463P17 S 10q11.21~21.1(SC)
chr10 47Mb AL731561.12*d stSG50329 AQ635340.1*u SP6 multiple_placements_on_genome
10 RP11-489D8 S 10q11.21~21.1(SC)
chr10 53Mb AC022025.8 AFM265VD9, AFM265VD9*u    
10 RP11-92I18 C 10q11.2~21.1(FHCRC)
chr10 50Mb   SHGC-37683 AQ321433.1 T7,
AQ286243.1 SP6
 
10 CTB-10D23 R 10q11.2~21(CSMC)
chr10 54Mb   AFMA064WB1    
10 RP11-455I1 S 10q11.22~21.1(SC)
chr10 56Mb AC079271.4 stSG68164*u AQ587167.1 T7,
AQ587164.1 SP6
 
10 RP11-29J13 S 10q11.23~21.1(SC)
chr10 57Mb AC025427.11 stSG72171    
10 RP11-183F21 RS 10q11.23~21.2(SC)
10q21.1c(NCI)
chr10 55Mb AC027671.9 stSG72239 AQ418852.1 SP6,
AQ418854.1 T7
 
10 RP11-394D15 S 10q11.23~21.2(SC)
chr10 55Mb AC024073.7 stSG67941*u    
10 RP11-95G14 R 10q21.1a(NCI)
chr10 53Mb AC026228.6 SHGC-6416 AQ314200.1 T7,
AQ314198.1 SP6
 
10 RP11-133C15 C 10q21.1(FHCRC)
chr10 53Mb   SHGC-3808 AQ384264.1 T7  
10 RP11-187N8 C 10q21.1(FHCRC)
chr10 55Mb   SHGC-36014 AQ416391.1 T7  
10 RP11-240K9 C 10q21.1(FHCRC)
chr10 52Mb   SHGC-36560    
10 RP11-67O23 C 10q21.1(FHCRC)
chr10 53Mb   SHGC-6416 AQ239067.1 T7,
AQ201625.1
 
10 RP11-50A5 C 10q21.1~21.2(FHCRC)
chr10 60Mb   AFM234WH6 AQ052146.1  
10 RP11-120C12 S 10q21.1~21.3(SC)
chr10 63Mb AC024597.8 WI-14230 AQ349847.1 SP6,
AQ349850.1 T7
 
10 RP11-131N11 C 10q21(FHCRC)
chr10 62Mb AC022390.9 AA278384    
10 RP11-166B18 S 10q21.1~21.3(SC)
chr10 61Mb AL391707.9 AFMA102WE5 AQ380939.1 T7,
AQ419828.1 SP6
 
10 RP11-170M17 S 10q21.1~21.3(SC)
chr10 65Mb AC044782.6 stSG72959 AQ417500.1 SP6  
10 RP11-176H12 S 10q21.1~21.3(SC)
chr10 65Mb AC027670.6 stSG68866*u AQ414221.1 SP6  
10 RP11-179B15 CS 10q21.1(FHCRC)
10q21.1~21.3(SC)
chr10 59Mb AC016396.6 SHGC-17230*u AQ418293.1 SP6,
AQ418296.1 T7
 
10 RP11-179K3 S 10q21.1~21.3(SC)
chr10 66Mb AC024600.5, AC024368.1*u AFM079ya1 AQ415387.1 SP6,
AQ415390.1 T7
 
10 RP11-252C24 S 10q21.1~21.3(SC)
chr10 66Mb AL513321.8 stbA252C24T7 AQ491076.1 T7  
10 RP11-267O2 S 10q21.1~21.3(SC)
chr10 62Mb AC024072.5 D10S1409    
10 RP11-351O1 S 10q21.1~21.3(SC)
chr10 64Mb AC022022.10 stSG16364*u    
10 RP11-362G13 S 10q21.1~21.3(SC)
      SHGC-14437*u    
10 RP11-371O16 S 10q21.1~21.3(SC)
chr10 126Mb AC026886.9 stbA661C1SP6*d AQ532791.1*d SP6 multiple_placements_on_genome
10 RP11-371O16 S 10q21.1~21.3(SC)
chr10 59Mb AC026886.9*d stbA661C1SP6 AQ532791.1 SP6 multiple_placements_on_genome
10 RP11-373P23 S 10q21.1~21.3(SC)
chr10 59Mb AC023170.10 A007E45    
10 RP11-440E22 S 10q21.1~21.3(SC)
chr10 61Mb   RH51236, A006Q04    
10 RP11-456A18 S 10q21.1~21.3(SC)
chr10 60Mb AC022539.13 AFM234WH6, AFM234WH6*u AQ583413.1 T7,
AQ583409.1 SP6
 
10 RP11-508P23 S 10q21.1~21.3(SC)
chr10 63Mb AC067742.7 AFM234WC5    
10 RP11-561F6 RS 10q21.1~21.3(SC)
10q21.2a(NCI)
chr10 58Mb AC069026.5 AFM336XD1    
10 RP11-59J5 S 10q21.1~21.3(SC)
chr10 61Mb AC022027.7 sts-AA021431 AQ198658.1  
10 CTB-66H14 R 10q21.2~21.3(CSMC)
chr10 61Mb   AFMA102WE5    
10 RP11-72F15 C 10q21.2~21.3(FHCRC)
chr10 62Mb   SHGC-36311    
10 RP11-161L14 S 10q21.2~22.1(SC)
chr10 66Mb AL390865.10 stbA49L23A AQ377251.1 SP6,
AQ377252.1*u T7
 
10 RP11-222A11 S 10q21.2~22.1(SC)
chr10 66Mb AC020641.8 D10S1241    
10 RP11-4G18 S 10q21.2~22.1(SC)
chr11 82Mb AC022399.15 RH38565, SHGC-2107 B49027.1 SP6,
B49028.1 T7
 
10 RP11-93L14 RS 10q21.2~22.1(SC)
10q21.3d(NCI)
chr10 68Mb AC022029.7 stSG46416 AQ312697.1 SP6,
AQ312699.1 T7
 
10 RP11-25P7 R 10q21.2b(NCI)
chr10 64Mb AC016212.3 SHGC-32854 B82159.1 T7,
AQ013494.1 ,
AQ013496.1
 
10 CTB-15E11 R 10q21.3(CSMC)
chr10 64Mb   AFMA162ZH9    
10 CTB-20E15 R 10q21.3(CSMC)
chr10 64Mb   AFMA162ZH9    
10 RP11-14I14 C 10q21.3(FHCRC)
chr10 64Mb   SHGC-36251 B87967.1 T7  
10 RP11-237J7 C 10q21.3(FHCRC)
chr10 66Mb AL590411.7 SHGC-17478*u AQ481720.1 T7,
AQ481717.1 SP6
 
10 RP11-280H23 C 10q21.3(FHCRC)
chr10 68Mb   SHGC-523    
10 RP11-32M14 C 10q21.3(FHCRC)
chr10 85Mb   SHGC-5316    
10 RP11-33O2 C 10q21.3(FHCRC)
chr10 67Mb   SHGC-10261 AQ046875.1  
10 RP11-48P18 C 10q21.3(FHCRC)
chr10 22Mb AC010161.6 SHGC-14733*d   multiple_placements_on_genome
10 RP11-48P18 C 10q21.3(FHCRC)
chr10 67Mb AC010161.6*d SHGC-14733   multiple_placements_on_genome
10 RP11-52K17 C 10q21.3(FHCRC)
chr10 71Mb   SHGC-3803 AQ052517.1 ,
AQ052514.1
 
10 RP11-8E20 C 10q21.3(FHCRC)
chr10 64Mb   SHGC-32854    
10 RP11-99D16 C 10q21.3(FHCRC)
chr10 69Mb   SHGC-357 AQ318139.1 SP6,
AQ318141.1 T7
 
10 RP11-135E4 RS 10q21.3~22.1(SC)
10q21.3e(NCI)
chr10 70Mb AL590067.1 SHGC-52582 AQ345266.1 SP6,
AQ380041.1 T7
 
10 RP11-227H15 S 10q21.3~22.1(SC)
chr10 70Mb AL596223.3 A009J19*u, A009J19*u    
10 RP11-428G2 S 10q21.3~22.1(SC)
chr10 66Mb AL592466.9 stbA151H17SP6    
10 RP11-6P16 C 10q21.3~22.1(FHCRC)
chr10 70Mb AC011010.4 SHGC-35892 B49554.1 SP6,
B49555.1 T7
 
10 RP11-86K9 C 10q21.3~22.1(FHCRC)
chr10 69Mb AL360177.23 SHGC-6703 AQ283094.1 T7  
10 CTA-393C10 R 10q22.1(CSMC)
chr10 71Mb   D10S1466    
10 CTA-592F9 R 10q22.1(CSMC)
chr10 70Mb   D10S1742    
10 CTB-20H22 R 10q22.1(CSMC)
chr10 68Mb   AFMA125XH9    
10 CTB-44D10 R 10q22.1(CSMC)
chr10 79Mb   D10S206    
10 RP11-104F15 C 10q22.1(FHCRC)
chr10 71Mb AC022532.13 SHGC-30283 AQ313858.1 SP6,
AQ313859.1 T7
 
10 RP11-28E3 C 10q22.1(FHCRC)
chr10 73Mb   SHGC-3413 B84800.1 SP6,
B84801.1 T7
 
10 RP11-29P24 C 10q22.1(FHCRC)
chr10 72Mb AC023639.2 SHGC-36893 B87660.1 T7  
10 RP11-41F17 C 10q22.1(FHCRC)
chr10 72Mb   SHGC-2006 AZ518158.1 SP6,
AQ029216.1*u T7
 
10 RP11-50K4 C 10q22.1(FHCRC)
chr10 72Mb   SHGC-2040 AQ052152.1 ,
AQ052154.1
 
10 RP11-58O1 CR 10q22.1(FHCRC)
10q22.1e(NCI)
chr10 72Mb AL359384.17 SHGC-3186 AQ201623.1 ,
AQ201626.1
 
10 CTA-389H12 R 10q22.1~22.3(CSMC)
chr10 73Mb   AFMA344YD1    
10 CTA-400B7 R 10q22(CSMC)
chr10 86Mb   D10S2175    
10 CTB-11C3 R 10q22(CSMC)
chr10 85Mb   AFMA301XG9    
10 CTB-6I14 R 10q22(CSMC)
chr10 85Mb   SHGC-5316, D10S532*u    
10 RP11-21B16 C 10q22(FHCRC)
chr10 79Mb AC063928.18*u SHGC-815 B85791.1 T7  
10 RP11-282N18 C 10q22(FHCRC)
chr10 74Mb   SHGC-17474    
10 RP11-69I18 C 10q22(FHCRC)
chr10 73Mb   SHGC-3192 AQ237375.1 T7,
AQ237374.1 SP6
 
10 RP11-178G16 C 10q22~23(FHCRC)
chr10 75Mb AL731576.9 SHGC-13520    
10 RP11-529C24 C 10q22~23(FHCRC)
chr10 81Mb AL357792.15 RH44105 BH141028.1 T7,
BH141046.1 SP6
 
10 RP11-112F5 C 10q22.2(FHCRC)
chr10 77Mb   SHGC-716, SHGC-716*u AQ313038.1 SP6,
AQ343245.1*u T7
 
10 RP11-152N13 C 10q22.2(FHCRC)
chr10 74Mb AC016394.13 SHGC-15340 AQ384612.1 T7,
AQ384611.1 SP6
 
10 RP11-17O5 C 10q22.2(FHCRC)
chr10 78Mb   SHGC-2056 B81879.1 T7  
10 RP11-243C1 C 10q22.2(FHCRC)
chr10 75Mb   SHGC-13520 AQ482374.1 SP6,
AQ482376.1 T7
 
10 RP11-62E15 C 10q22.2(FHCRC)
chr10 75Mb   SHGC-9801, SHGC-13520, SHGC-716*d, SHGC-716*u AQ198651.1 multiple_placements_on_genome
10 RP11-62E15 C 10q22.2(FHCRC)
chr10 77Mb   SHGC-716, SHGC-9801*d, SHGC-13520*d, SHGC-716*u AQ198651.1*d multiple_placements_on_genome
10 RP11-19C18 C 10q22.2~22.3(FHCRC)
chr10 78Mb   SHGC-13504 B82956.1 T7  
10 RP11-157J13 S 10q22.2~23.1(SC)
chr10 79Mb AL731555.10 AFMa124xh1 AQ374038.1 SP6,
AQ374041.1 T7
 
10 RP11-45P20 CR 10q22.3(FHCRC)
10q22.3a(NCI)
chr10 78Mb AC012111.3 SHGC-20613 AQ202348.1 ,
AQ202344.1
 
10 RP11-78F9 C 10q22.3(FHCRC)
chr10 80Mb   SHGC-243 AQ286456.1 SP6,
AQ286458.1*u T7
 
10 RP11-31L4 CR 10q22.3~23.1(FHCRC)
10q22.3f(NCI)
chr10 80Mb AC078775.15 SHGC-11186 AQ082309.1 ,
CL423238.1 SP6,
CL423241.1 T7,
AQ046665.1
 
10 RP11-428P16 RS 10q22.3~23.1(SC)
10q22.3b(NCI)
chr10 78Mb AL731556.11 RH41997 AQ549562.1*u T7  
10 RP11-93O23 C 10q22.3~23.1(FHCRC)
chr10 82Mb   SHGC-528*u AQ322597.1 SP6,
AQ322598.1 T7
 
10 RP11-541N11 S 10q22.3~23.33(SC)
      D10S2205*u    
10 RP11-188A14 C 10q23.1(FHCRC)
chr10 85Mb   SHGC-5316    
10 RP11-284D10 C 10q23.1(FHCRC)
chr10 85Mb   SHGC-2015, SHGC-5316, SHGC-2015*u    
10 CTB-16E21 R 10q23(CSMC)
chr10 92Mb   D10S564    
10 CTB-47P19 R 10q23(CSMC)
chr10 90Mb   AFMB362YG5    
10 CTB-66N17 R 10q23(CSMC)
chr10 89Mb   D10S215    
10 RP11-119L4 C 10q23(FHCRC)
chr3 2Mb   AFMB296ZF5 AQ341777.1 SP6,
AQ341778.1 T7
 
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
10 RP11-11O21 C 10q23(FHCRC)
chr10 89Mb   SHGC-15188 B73213.1 T7,
B73212.1 SP6
 
10 RP11-129G17 C 10q23(FHCRC)
chr10 89Mb AL353149.10 SHGC-2010, SHGC-2010*u    
10 RP11-165M18 S 10q23.1~23.33(SC)
chr15 26Mb   stSG21911*d AQ382104.1 SP6,
AQ382108.1 T7
multiple_placements_on_genome
10 RP11-165M18 S 10q23.1~23.33(SC)
chr10 42Mb   stSG21911 AQ382104.1*d SP6,
AQ382108.1*d T7
multiple_placements_on_genome
10 RP11-168O10 C 10q23(FHCRC)
chr10 91Mb AL353146.9 AA489743 AQ421345.1 SP6  
10 RP11-52G13 C 10q23(FHCRC)
chr10 88Mb   SHGC-526 AQ052436.1  
10 RP11-67L13 C 10q23(FHCRC)
chr10 92Mb   SHGC-37185, SHGC-37185*u AQ202712.1  
10 RP11-79A15 C 10q23(FHCRC)
chr10 89Mb   SHGC-15188 AQ282202.1 T7,
AZ520669.1 SP6,
AQ282199.1 SP6
 
10 RP11-35J23 CR 10q23~24(FHCRC)
10q24.1b(NCI)
chr10 98Mb AL136181.13 SHGC-9747 AQ045830.1 ,
AQ045828.1
 
10 RP11-67K6 C 10q23~24(FHCRC)
chr10 97Mb   SHGC-31032 AQ201750.1 ,
AQ239209.1 T7
 
10 RP11-7D5 C 10q23~24(FHCRC)
chr10 97Mb AL356632.12 H43657 B71268.1 SP6,
AZ517235.1 T7
 
10 RP11-8D20 C 10q23~24(FHCRC)
chr10 98Mb   SHGC-9747    
10 RP11-9M11 C 10q23.2(FHCRC)
chr10 88Mb   SHGC-526 B72623.1 SP6  
10 RP11-149K18 C 10q23.2~23.3(FHCRC)
chr10 35Mb   SHGC-20600    
10 RP11-124L5 S 10q23.2~24.2(SC)
chr10 85Mb AC022389.9 A006B47*u, A006B47*u AQ344045.1 SP6,
AQ344047.1 T7
 
10 RP11-420K10 S 10q23.2~24.2(SC)
chr10 88Mb AC021036.6 stSG48578 AQ549049.1 T7  
10 RP11-166J24 C 10q23.31(FHCRC)
chr10 92Mb   SHGC-14535, AFM022TE3*u AQ381014.1 T7,
AQ420445.1 SP6
 
10 RP11-10L13 CR 10q23.3(FHCRC)
10q23.31d(NCI)
chr10 92Mb AC011170.3 SHGC-14535, SHGC-3514, AFM022TE3*u B72941.1 T7,
B72940.1 SP6
 
10 RP11-71F8 C 10q23.3(FHCRC)
chr10 92Mb   SHGC-3518, SHGC-37185, SHGC-37185*u AQ268685.1 SP6,
AQ268686.1 T7
 
10 RP11-83C5 C 10q23.3(FHCRC)
chr10 99Mb   SHGC-15226, SHGC-31924    
10 RP11-90B18 C 10q23.3(FHCRC)
chr10 92Mb   SHGC-3514, AFM022TE3*u AQ285317.1 T7  
10 RP11-426P1 S 10q23.31~24.2(SC)
chr10 89Mb   stSG49465    
10 RP11-44D15 S 10q23.31~24.2(SC)
chr10 97Mb AC021037.6 stSG31812 AQ198826.1 ,
AQ198825.1
 
10 RP11-56M3 S 10q23.31~24.2(SC)
chr10 92Mb AL731553.12 SHGC-14535, SHGC-3514 AQ115271.1  
10 RP11-483F11 RS 10q23.31~24.33(SC)
10q24.2c(NCI)
chr10 101Mb AL133353.6 RH26697 AQ629297.1 SP6,
BH367228.1 SP6,
AQ629299.1 T7,
BH141086.2 T7
 
10 CTB-2K21 R 10q24.1(CSMC)
chr10 94Mb   AFM289ZH5, AFM292VG1*u, D10S1755*u    
10 RP11-123G19 C 10q24.1(FHCRC)
chr10 99Mb   SHGC-15226, SHGC-31924 AQ345319.1 SP6,
AQ345321.1 T7
 
10 CTB-17F3 R 10q24(CSMC)
chr10 107Mb   D10S530    
10 CTB-44A19 R 10q24(CSMC)
chr10 98Mb   D10S574    
10 CTB-49A15 R 10q24(CSMC)
chr10 105Mb   AFMA217YG5    
10 CTB-55B9 R 10q24(CSMC)
chr10 97Mb   D10S571    
10 RP11-108L7 S 10q24.1~24.33(SC)
chr10 102Mb AL133215.17 SHGC-32265 AQ348763.1 SP6  
10 RP11-411B6 S 10q24.1~24.33(SC)
chr10 102Mb AL133352.12 RH69723 BH141068.1 SP6,
BH141067.1 T7
 
10 RP11-4G4 C 10q24(FHCRC)
chr10 101Mb   SHGC-17231 B48034.1 SP6,
B48035.1 T7
 
10 RP11-80H11 C 10q24(FHCRC)
chr10 101Mb   SHGC-34176 AQ283008.1 SP6,
AQ283010.1 T7
 
10 RP11-68M5 S 10q24.1~25.1(SC)
chr10 103Mb   WI-16946 AQ236974.1 SP6,
AQ236976.1 T7
 
10 RP11-128H11 C 10q24~25(FHCRC)
chr10 107Mb   SHGC-2001    
10 RP11-16H23 CR 10q24~25(FHCRC)
10q25.1a(NCI)
chr10 105Mb AL138761.12 SHGC-31986 B83625.1*u T7  
10 RP11-18I14 C 10q24~25(FHCRC)
chr10 104Mb AL121928.13 AA456850    
10 RP11-287G20 C 10q24~25(FHCRC)
chr10 106Mb   SHGC-5315, SHGC-2009*u    
10 RP11-331G8 C 10q24~25(FHCRC)
chr10 101Mb AL442068.16 R91503    
10 RP11-3G2 C 10q24~25(FHCRC)
chr10 111Mb   SHGC-2049 B47908.1 SP6,
B47909.1 T7
 
10 RP11-105N15 C 10q24.2(FHCRC)
chr10 103Mb   SHGC-32623 AQ323945.1 SP6,
AQ323947.1*u T7
 
10 RP11-19K9 C 10q24.2(FHCRC)
chr10 99Mb   SHGC-32394 AQ013287.1 ,
B81974.1*u T7
 
10 RP11-79M5 C 10q24.2(FHCRC)
chr10 96Mb   SHGC-31032 AQ281998.1 T7,
AZ519107.1 SP6,
AQ317614.1 SP6
 
10 RP11-89G15 C 10q24.2(FHCRC)
chr10 103Mb   SHGC-33914, SHGC-10960, SHGC-2946, SHGC-534*d AQ284446.1 T7 multiple_placements_on_genome
10 RP11-89G15 C 10q24.2(FHCRC)
chr10 125Mb   SHGC-534, SHGC-33914*d, SHGC-10960*d, SHGC-2946*d AQ284446.1*d T7 multiple_placements_on_genome
10 RP11-37L21 C 10q24.2~24.3(FHCRC)
chr10 102Mb   SHGC-32265 AQ029351.1 T7  
10 CTA-224D5 R 10q24.3(CSMC)
chr10 104Mb   AFMA343YG5    
10 RP11-21N23 C 10q24.3(FHCRC)
chr10 103Mb   SHGC-10960, SHGC-2946 B86067.1 T7  
10 RP11-260L2 C 10q24.3(FHCRC)
chr10 101Mb   SHGC-30533    
10 RP11-34D15 C 10q24.3(FHCRC)
chr10 101Mb AL139819.8 SHGC-2054 AQ046383.1  
10 RP11-101J13 C 10q24.3~25.1(FHCRC)
chr10 106Mb   SHGC-5315, SHGC-2009*u AQ320179.1 T7,
AQ320177.1 SP6
 
10 RP11-127L20 S 10q24.31~25.1(SC)
chr10 106Mb AL162742.9 SHGC-5315, SHGC-2009*u    
10 RP11-170L14 S 10q24.31~25.2(SC)
chr10 107Mb   stSG68703 AQ413188.1 SP6,
AZ519356.1 T7
 
10 RP11-432B10 S 10q24.31~25.2(SC)
chr10 109Mb AC022024.7 stSG70471    
10 RP11-463G20 S 10q24.31~25.2(SC)
chr12 43Mb   stSG67529 AZ521348.1 SP6,
AQ634813.1 T7
 
10 RP11-207D6 S 10q24.31~25.3(SC)
chr9 98Mb   D10S1217*d AQ415906.1 SP6,
AQ415907.1 T7
multiple_placements_on_genome
10 RP11-207D6 S 10q24.31~25.3(SC)
chr10 36Mb   D10S1217 AQ415906.1*d SP6,
AQ415907.1*d T7
multiple_placements_on_genome
10 RP11-411P18 S 10q24.33~25.3(SC)
chr10 115Mb AC022023.7 stSG70243    
10 RP11-493N7 S 10q24.33~25.3(SC)
chr10 112Mb AC021040.5 stSG70259    
10 RP11-211P6 S 10q24.33~26.11(SC)
chr10 115Mb AC068708.4*d stSG68095   multiple_placements_on_genome
10 RP11-211P6 S 10q24.33~26.11(SC)
chr10 126Mb AC068708.4 stSG68095*d   multiple_placements_on_genome
10 RP11-327O9 S 10q24.33~26.11(SC)
chr6 138Mb   stSG42602*u BH614633.1 T7,
BH614634.1 SP6
 
10 RP11-182C2 C 10q25.1(FHCRC)
chr10 111Mb AL162613.22 SHGC-3772    
10 RP11-41D21 CR 10q25.1(FHCRC)
10q25.1b(NCI)
chr10 108Mb AL359847.24 SHGC-31312 AZ518130.1 SP6,
AQ029197.1*u T7
 
10 RP11-49H17 C 10q25.1(FHCRC)
chr10 109Mb   SHGC-532 AQ053032.1 ,
AQ060566.1
 
10 CTB-54O2 R 10q25(CSMC)
chr10 118Mb AC005661.1*d D10S187   multiple_placements_on_genome
10 CTB-54O2 R 10q25(CSMC)
chr10 118Mb AC005661.1 D10S187*d   multiple_placements_on_genome
10 RP11-182P7 C 10q25(FHCRC)
chr10 111Mb   SHGC-6420    
10 RP11-1I16 C 10q25(FHCRC)
chr10 113Mb   SHGC-20636    
10 RP11-246B13 C 10q25(FHCRC)
chr10 108Mb   SHGC-17477*u AQ478470.1 T7,
AQ478469.1 SP6
 
10 RP11-32I9 C 10q25(FHCRC)
chr10 116Mb   SHGC-35224    
10 RP11-431P18 S 10q25.1~25.3(SC)
chr10 113Mb AC068709.4 SHGC-7570 AQ549250.1 T7  
10 RP11-90J14 S 10q25.1~25.3(SC)
chr10 111Mb   SHGC-3772, SHGC-6420, stSG42559 AQ318556.1 SP6,
AQ286220.1 T7
 
10 RP11-77E11 C 10q25~26(FHCRC)
chr10 120Mb   SHGC-34017 AQ268119.1 SP6,
AQ268122.1 T7
 
10 RP11-96N16 CR 10q25.3b(NCI)
10q25~26(FHCRC)
chr10 117Mb AC073588.3 AI049675 AQ315861.1 T7,
AQ315858.1 SP6
 
10 RP11-31O24 C 10q25.2~25.3(FHCRC)
chr10 114Mb   SHGC-20637 AQ046032.1*u  
10 RP11-46G13 C 10q25.2~25.3(FHCRC)
chr10 115Mb   SHGC-20638 AQ198611.1 ,
AQ198608.1
 
10 RP11-354M20 S 10q25.2~26.11(SC)
chr10 119Mb AC022395.4 stSG68076 AQ552813.1 T7,
AQ531414.1 SP6
 
10 RP11-317F20 RS 10q25.2~26.2(SC)
10q25.3a(NCI)
chr10 116Mb AL133384.12 RH10090 AQ535184.1 T7,
AQ535181.1 SP6
 
10 RP11-106N20 C 10q25.3(FHCRC)
chr10 114Mb   SHGC-33545 AQ318860.1 SP6,
AQ318862.1 T7
 
10 RP11-498K22 S 10q25.3~26.2(SC)
chr10 127Mb AC068897.1*d stSG68564   multiple_placements_on_genome
10 RP11-498K22 S 10q25.3~26.2(SC)
chr10 17Mb AC068897.1 stSG68564*d   multiple_placements_on_genome
10 RP11-500G22 S 10q25.3~26.2(SC)
chr10 123Mb AL731566.7 stSG72444    
10 RP11-255D5 CS 10q25.3(FHCRC)
10q26.11~26.3(SC)
chr10 123Mb AL731542.6 sts-AA011535, SHGC-36497    
10 CTA-393E1 R 10q26.1(CSMC)
chr10 125Mb   D10S1467    
10 RP11-240L14 C 10q26.1(FHCRC)
chr10 122Mb   SHGC-841 AQ484494.1 SP6,
AQ484496.1 T7
 
10 RP11-257O17 CR 10q26.1(FHCRC)
10q26.12b(NCI)
chr10 122Mb AC023282.8 SHGC-841, SHGC-10206    
10 RP11-262E19 C 10q26.1(FHCRC)
chr10 124Mb   SHGC-31995 AQ487758.1 T7  
10 RP11-47G11 C 10q26.1(FHCRC)
chr10 125Mb AL683842.11 SHGC-534 AQ202204.1 ,
AQ202203.1
 
10 RP11-48B22 C 10q26.1(FHCRC)
chr10 121Mb   SHGC-14526*u AQ200516.1 ,
AQ200520.1
 
10 RP11-51G15 C 10q26.1(FHCRC)
chr10 120Mb   SHGC-3534 AQ052348.1  
10 RP11-5M6 C 10q26.1(FHCRC)
chr10 126Mb   SHGC-30414    
10 RP11-7P17 CR 10q26.1(FHCRC)
10q26.13a(NCI)
chr10 123Mb AC009989.12 SHGC-9871 B72273.1 SP6,
AZ520154.1 T7
 
10 RP11-101I20 C 10q26.1~26.2(FHCRC)
chr10 124Mb AL731666.6 SHGC-13269 AQ347250.1 SP6,
AQ312559.1 T7
 
10 RP11-16P8 C 10q26.1~26.2(FHCRC)
chr10 128Mb AL583860.7 SHGC-895 B81769.1 SP6,
B82592.1 T7
 
10 CTB-21A23 R 10q26(CSMC)
chr10 132Mb   AFMA162XG1    
10 CTB-41J12 R 10q26(CSMC)
chr10 129Mb   D10S217   multiple_placements_on_genome
10 CTB-41J12 R 10q26(CSMC)
chr10 81Mb   D10S217   multiple_placements_on_genome
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
10 CTB-41K1 R 10q26(CSMC)
      AFMB012ZG1*u, D10S1700*u    
10 CTB-7C16 R 10q26(CSMC)
chr10 127Mb   D10S575    
10 RP11-152G7 S 10q26.1~26.3(SC)
chr10 92Mb AC023902.7 stSG70363 AQ379830.1 SP6,
AQ380271.1 T7
 
10 RP11-408L20 S 10q26.11~26.3(SC)
chr10 132Mb AC067746.7 stSG70260    
10 RP11-45A17 C 10q26(FHCRC)
chr10 133Mb AL162274.17 AA063521 AQ199021.1 ,
AQ199023.1
 
10 RP11-45O7 RS 10q26.11~26.3(SC)
10q26.13d(NCI)
chr10 126Mb AL391708.8 D10S1656 AQ200221.1 ,
CL423275.1 T7,
CL423270.1 SP6,
AQ200219.1
 
10 RP11-462G8 S 10q26.11~26.3(SC)
chr10 132Mb AL390203.29 stSG46311*d   multiple_placements_on_genome
10 RP11-462G8 S 10q26.11~26.3(SC)
chr10 126Mb AL390203.29*d stSG46311   multiple_placements_on_genome
10 RP11-162A23 C 10q26.12(FHCRC)
chr10 124Mb AC012391.10 SHGC-13269, SHGC-34669 AQ378060.1 SP6  
10 RP11-70E19 C 10q26.12(FHCRC)
chr10 125Mb AL592502.6 SHGC-2043 AQ239045.1 T7,
AQ239041.1 SP6
 
10 RP11-31A20 CRS 10q26.13~26.3(SC)
10q26.2(FHCRC)
10q26.2c(NCI)
chr10 129Mb AL157393.21 SHGC-938 AQ044897.1  
10 RP11-156N9 C 10q26.2(FHCRC)
chr10 129Mb   SHGC-938 AQ389277.1 SP6,
AQ389280.1 T7
 
10 RP11-32H11 C 10q26.2(FHCRC)
chr10 128Mb BX470201.4 SHGC-91    
10 RP11-48A2 C 10q26.2(FHCRC)
chr10 129Mb   SHGC-33916 AQ201929.1 ,
AQ201931.1
 
10 RP11-88B12 C 10q26.2(FHCRC)
chr10 129Mb   SHGC-938 AZ516107.1 T7,
AQ286596.1 T7,
AQ286594.1 SP6
 
10 RP11-8O10 C 10q26.2(FHCRC)
chr10 127Mb   SHGC-2031 B72442.1 SP6,
B72443.1 T7
 
10 CTB-40N7 R 10q26.2~26.3(CSMC)
chr10 130Mb   AFMA184WC1    
10 CTB-5B9 R 10q26.2~26.3(CSMC)
chr10 130Mb   AFMA184WC1    
10 RP11-116J12 CS 10q26.2~26.3(SC)
10q26.3(FHCRC)
chr10 134Mb   RH51132, SHGC-12553 AQ346974.1*u T7  
10 RP11-319A15 S 10q26.2~26.3(SC)
chr10 133Mb   stSG2795    
10 RP11-108K14 C 10q26.3(FHCRC)
chr10 135Mb AL161645.14 H50500 AQ323968.1 T7,
AQ323965.1 SP6
 
10 RP11-122K13 C 10q26.3(FHCRC)
chr10 134Mb AL360181.37 SHGC-12553, SHGC-716*u AQ342823.1 SP6,
AQ342825.1 T7
 
10 RP11-142I8 C 10q26.3(FHCRC)
chr10 133Mb   SHGC-2019 AQ385314.1 T7,
AQ385311.1 SP6
 
10 RP11-27F2 C 10q26.3(FHCRC)
chr10 133Mb   SHGC-14552    
10 RP11-35C24 C 10q26.3(FHCRC)
chr10 134Mb   SHGC-362    
10 RP11-42K2 C 10q26.3(FHCRC)
chr10 129Mb   SHGC-20646 AQ046579.1 ,
AQ116234.1
 
total310C:178 R:75 S:87310304 117310182 

1 Distributor: C, Children's hospical Oakland research institute; R, Research Genetics; S, Sanger Center

2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.

4 Sequence-tag

  *d indicates sequences that disagree with placement on the genome.

  *u indicates seqeunces that didn't align to the genome or were not used for annotation because the clone was placed to multiple locations on the human genome.