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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones |
Chr | clone name | Distributor1 | FISH | Placement on genome2 | Placement summary3 | Insert sequence4 | STS4 | BAC-ends4 | Flag |
21 | RP11-13J15 | 21q21(FHCRC) |
chr21 24Mb | AC011275.3 | SHGC-4988 | B76096.1 T7, B83395.1 SP6, B76095.1 SP6 | |||
21 | RP11-15H6 | 21q21(FHCRC) |
chr21 26Mb | AC011860.4 | AFMB291YB9 | B75334.1 SP6, B75335.1 T7 | |||
21 | RP11-89M24 | 21q21(FHCRC) |
chr21 15Mb | AC022685.2 | AZ517686.1 T7 | ||||
21 | RP11-49B5 | 21q21.1e(NCI) |
chr21 20Mb | AF238375.3 | AQ052036.1 , AQ052035.1 | ||||
21 | RP11-32A2 | 21q21.2~21.3(FHCRC) |
chr21 29Mb | AP000239.2 | SHGC-6854 | ||||
21 | RP11-14B21 | 21q22.1(FHCRC) |
chr21 31Mb | AP000245.3 | SHGC-6873, AFM317TC9 | B82254.1 SP6, B87952.1 T7 | |||
21 | RP11-446L19 | 21q22.2~22.3(FHCRC) |
chr21 43Mb | AC020600.4 | |||||
21 | RP11-16B19 | 21q22.3(FHCRC) |
chr21 44Mb | AC011782.4 | AA443634 | B83593.1 T7, B83592.1*u SP6 | |||
21 | RP11-549G7 | 21q22.3(FHCRC) |
chr21 43Mb | AC019224.3 | |||||
total | 9 | C:8 R:1 S:0 | 9 | 9 | 9 | 5 | 6 |
1 Distributor: , Children's hospical Oakland research institute; , Research Genetics; , Sanger Center
2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included
3 Placement summary indicates sequences used for clone placement.
BAC-end sequence aligned in the plus orientation
BAC-end sequence aligned in the minus orientation
insert sequence
STS aligned
insert sequence has clone end information.
4 Sequence-tag
*d indicates sequences that disagree with placement on the genome.
*u indicates seqeunces that didn't align to the genome or were not used for annotation because the clone was placed to multiple locations on the human genome.