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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones


FISH chr: FISH data source:
Clone distributor:
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Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
3 CTC-228K22 3pter(UChicago)
 chr3 0Mb   D3S4559    
3 RP11-129K1 C 3p26(FHCRC)
 chr3 2Mb AC069522.7 AFMA064WH9    
3 RP11-129L14 C 3p26(FHCRC)
 chr3 2Mb   AFMB296ZF5    
3 RP11-204C23 C 3p26(FHCRC)
 chr3 1Mb AC018814.6,
AC024216.16, AC006431.9*u		 AFM217XD2, AFM217XD2*u AQ413785.1 T7,
AQ413782.1 SP6		  
3 RP11-32F23 C 3p26(FHCRC)
 chr3 4Mb AC069264.5 AFM217XD6 AQ047334.1  
3 RP11-33J20 C 3p26(FHCRC)
 chr3 2Mb   AFMB296ZF5 AQ044995.1  
3 RP5-850I3 R 3p26(UCSF)
 chr3 2Mb   AFMB296ZF5    
3 CTB-14N11 R 3p26~25(CSMC)
       D3S3926*u, EST107451*u    
3 RP11-128A5 C 3p25~26(FHCRC)
 chr3 8Mb AC068312.5 AFMC023XB5    
3 RP11-28P14 C 3p25~26(FHCRC)
 chr3 6Mb AC067736.7 AFM234TF4, AFM234TF4*u B87467.1 T7,
AQ003475.1 SP6		  
3 CTB-15N5 R 3p25(CSMC)
 chr3 16Mb   AFM207WE5    
3 CTB-17A6 R 3p25(CSMC)
 chr3 11Mb   AFM079YG5    
3 CTB-3P23 R 3p25(CSMC)
 chr3 13Mb   AFMA353XA9    
3 CTB-47F22 R 3p25(CSMC)
 chr3 19Mb   AFMA083YE5    
3 CTB-9J5 R 3p25(CSMC)
 chr3 10Mb   AFMA337XG5, AFMA350XF5    
3 RP11-121D3 C 3p25(FHCRC)
 chr3 14Mb AC016963.10*d AFM205VA9*u AQ350922.1 SP6 multiple_placements_on_genome
3 RP11-121D3 C 3p25(FHCRC)
 chr3 2Mb AC016963.10 AFM205VA9*u AQ350922.1*d SP6 multiple_placements_on_genome
3 RP11-175G7 C 3p25(FHCRC)
 chr3 44Mb   AFM079YG5*d, AFM079YG5*u AZ521164.1 SP6 multiple_placements_on_genome
3 RP11-175G7 C 3p25(FHCRC)
 chr3 11Mb   AFM079YG5, AFM079YG5*u AZ521164.1*d SP6 multiple_placements_on_genome
3 RP4-561A19 R 3p25(UCSF)
 chr3 38Mb   AFM038XC1    
3 RP4-575N5 R 3p25(UCSF)
 chr3 15Mb   AFM197XG11    
3 RP4-605K1 R 3p25(UCSF)
 chr3 8Mb   D3S3591    
3 RP4-673B23 R 3p25(UCSF)
 chr3 8Mb   AFMC023XB5    
3 RP5-854A2 R 3p25(UCSF)
 chr3 4Mb   AFM217XD6    
3 RP5-862J8 R 3p25(UCSF)
 chr3 10Mb   D3S3589    
3 RP11-255O19 C 3p24.3~25(FHCRC)
 chr3 15Mb AC090945.1 AFM197XG11, AFM197XG11*u    
3 RP11-271E2 C 3p24.3~25(FHCRC)
 chr3 13Mb AC024151.16,
AC069462.3		 AFM283VB5, AFM283VB5*u    
3 RP11-279L16 C 3p24.3~25(FHCRC)
 chr3 15Mb AC069521.12 AFMB046ZB5 AQ508068.1 T7,
AQ508067.1*u SP6		  
3 RP4-712J19 R 3p24~25(UCSF)
 chr3 32Mb   D3S2432    
3 RP11-208G16 C 3p24.3(FHCRC)
 chr3 22Mb AC121253.3 AFM301ZE9 AQ418708.1 T7  
3 RP11-41F5 C 3p24.3(FHCRC)
 chr3 23Mb AC020626.6 AFMA346XA9 AQ029210.1 T7,
AZ518154.1 SP6		  
3 CTB-48J17 R 3p24(CSMC)
 chr3 27Mb   D3S1266    
3 RP11-245E5 C 3p24(FHCRC)
 chr3 22Mb AC018542.8 AFMB331YE9 AQ487267.1 SP6,
AQ487269.1 T7		  
3 RP4-632A13 R 3p24(UCSF)
 chr3 40Mb   D3S3658    
3 RP4-776M14 R 3p24(UCSF)
       D3S3455*u    
3 RP4-800E17 R 3p24(UCSF)
       SHGC-30024*u    
3 RP5-939A11 R 3p24(UCSF)
 chr3 41Mb   D3S4063    
3 RP11-103N21 CR 3p23~24(FHCRC)
3p24.1b(NCI)
 chr3 29Mb AC099048.2 AFM320WC9, AFM320WC9*u AQ314093.1 T7,
AQ314091.1 SP6		  
3 RP11-11L6 C 3p23~24(FHCRC)
 chr11 74Mb AC093412.3*d AFM183YC3*d, AFM183YC3*u BH897866.1 SP6,
BH897865.1 T7,
B74911.1*d SP6,
B74912.1*d T7		 multiple_placements_on_genome
3 RP11-11L6 C 3p23~24(FHCRC)
 chr3 28Mb AC093412.3 AFM183YC3, AFM183YC3*u B74911.1 SP6,
B74912.1 T7,
BH897865.1*d T7,
BH897866.1*d SP6		 multiple_placements_on_genome
3 CTB-18E2 R 3p23(CSMC)
 chr3 30Mb   AFMA090ZB1    
3 CTB-41C16 R 3p23(CSMC)
 chr3 30Mb   AFMA090ZB1    
3 CTB-34I13 R 3p22(CSMC)
 chr3 44Mb   UTR-04941    
3 CTB-43F9 R 3p22(CSMC)
       AFMA154WB9*u, D3S3563*u    
3 CTB-50E16 R 3p22(CSMC)
       AFMA154WB9*u, D3S3563*u    
3 CTB-50E17 R 3p22(CSMC)
       AFMA154WB9*u, D3S3563*u    
3 CTB-50I4 R 3p22(CSMC)
       AFMA154WB9*u, D3S3563*u    
3 CTD-2278F18 C 3p22(FHCRC)
3p22(UCSF)
 chr3 50Mb   Hs.201675    
3 RP11-209O16 CR 3p22(FHCRC)
3p22.2b(NCI)
 chr3 38Mb AC016156.11 AFM038XC1, AFM038XC1*u AQ420322.1 SP6  
3 RP11-235D8 C 3p22(FHCRC)
 chr8 37Mb   SHGC-10029 AQ491531.1 SP6  
3 RP11-241P3 C 3p22(FHCRC)
 chr3 42Mb AC092048.2 AFMA162WD9 AQ481742.1 SP6,
AQ482364.1 T7		  
3 RP11-286G5 C 3p22(FHCRC)
 chr3 36Mb AC092051.2 AFM220XG3, AFM220XG3*u    
3 RP4-690P14 R 3p22(UCSF)
 chr3 49Mb   D3S3092    
3 RP5-1059I15 R 3p22(UCSF)
 chr3 42Mb   SHGC-13840    
3 RP11-119L2 C 3p21~22(FHCRC)
 chr3 42Mb AC048329.8 AFMC006YH1 AQ341776.1 T7,
AQ341775.1 SP6		  
3 RP11-111P21 C 3p21.3(FHCRC)
 chr3 45Mb AC092500.2 AFMA231XE9 AQ341909.1 T7,
AQ341906.1 SP6		  
3 RP11-189H19 C 3p21.3(FHCRC)
 chr3 44Mb AC092046.2 AFMB291ZC9    
3 CTB-17N4 R 3p21.3~21.2(CSMC)
 chr3 54Mb   AFMB347ZG9    
3 CTA-2G6 R 3p21(CSMC)
 chr3 43Mb   D3S3678    
3 CTB-10N14 R 3p21(CSMC)
 chr3 48Mb   AFMA141ZC5    
3 CTB-18A22 R 3p21(CSMC)
 chr3 58Mb   AFMA119XC1    
3 CTB-18C21 R 3p21(CSMC)
 chr3 58Mb   AFMA119XC1    
3 CTB-20F12 R 3p21(CSMC)
 chr3 54Mb   AFMB338ZG9    
3 RP11-3B7 CR 3p21(FHCRC)
3p21.31f(NCI)
 chr3 49Mb AC121247.2 AA454143 B63346.1 T7,
B47886.1*u SP6		  
3 RP11-78O10 C 3p21(FHCRC)
 chr3 49Mb AC099330.1 AA129089 AQ285668.1 SP6  
3 RP4-553B21 R 3p21(UCSF)
 chr3 44Mb   SHGC-15360    
3 RP4-655G2 R 3p21(UCSF)
 chr3 44Mb   WI-17754    
3 RP4-736H12 R 3p21(UCSF)
 chr3 42Mb AC006060.1 D3S2319    
3 RP5-1148D10 R 3p21(UCSF)
       SHGC-11496*u    
3 RP5-817G5 R 3p21(UCSF)
       SHGC-11496*u    
3 RP5-923O15 R 3p21(UCSF)
 chr3 44Mb   SHGC-15360    
3 RP11-120C2 C 3p21.2(FHCRC)
 chr3 57Mb AC121250.2 AFMB059WF1 AQ349825.1 T7,
AQ349823.1 SP6		  
3 RP11-122D19 C 3p21.2(FHCRC)
 chr3 54Mb AC115282.2 AFM287YD9, AFM287YD9*u AQ383795.1 SP6,
BH897868.1 SP6,
AQ343573.1 T7,
BH897867.1 T7		  
3 RP11-124O2 C 3p21.2(FHCRC)
 chr3 54Mb AC018352.23,
AC138467.2		 AFM198YF2, AFM198YF2*u AQ343375.1 T7,
AQ343374.1 SP6		  
3 RP11-169G24 C 3p21.2(FHCRC)
 chr3 56Mb AC099775.2 AFMA082WH1 AQ413589.1 SP6  
3 RP11-189K9 C 3p21.2(FHCRC)
 chr3 54Mb AC068753.13 AFM274YD5, AFM274YD5*u AQ421648.1 SP6  
3 RP11-229A12 C 3p21.2(FHCRC)
 chr3 57Mb AC092418.3 AFM191VA5    
3 RP11-39L1 C 3p21.2(FHCRC)
 chr3 55Mb   AFMA072YB9 AQ029524.1 T7  
3 RP11-758M15 C 3p21.2(FHCRC)
 chr3 52Mb AC044892.6 AA757406, AA460675    
3 CTA-30F3 R 3p21.1(CSMC)
       D3S3066*u    
3 CTB-1K4 R 3p21.1(CSMC)
 chr3 60Mb   AFM220YH4, AFM220YH4*u    
3 CTB-1O12 R 3p21.1(CSMC)
 chr3 60Mb   AFM220YH4, AFM220YH4*u    
3 CTA-401B4 R 3p14.3(CSMC)
 chr3 125Mb   AFMA137ZF5    
3 RP11-180G14 C 3p14.3(FHCRC)
 chr3 59Mb   AFMA072ZH5    
3 RP11-8J14 C 3p14.3(FHCRC)
 chr3 54Mb   AFM198YF2, AFM198YF2*u    
3 CTB-17L15 R 3p14(CSMC)
 chr3 59Mb   AFMA072ZH5    
3 RP11-108A8 C 3p14(FHCRC)
 chr3 63Mb AC072020.9 AFM308XC9, AFM308XC9*u AQ318249.1 T7,
AQ318245.1 SP6		  
3 RP11-114P15 C 3p14(FHCRC)
 chr3 62Mb AC092039.2 AFMA163YF1 AQ383673.1 T7,
AQ342459.1 SP6		  
3 RP11-129B22 C 3p14(FHCRC)
 chr3 64Mb AC092040.2 AFM198TE7, AFM198TE7*u    
3 RP11-89O2 C 3p14(FHCRC)
 chr3 64Mb AC118548.1 AFM198TE7, AFM198TE7*u AQ283529.1 T7,
AZ517689.1 SP6,
AQ283526.1 SP6		  
3 RP11-94D19 C 3p14(FHCRC)
 chr3 60Mb AC096917.3 AFM211ZG11 AQ315786.1 T7,
AQ282117.1 SP6		  
3 RP11-146E16 C 3p13~14(FHCRC)
 chr3 67Mb AC092044.2 AFMA059XB5 AQ372336.1 T7,
AQ372333.1 SP6		  
3 CTB-7P8 R 3p14.2(CSMC)
 chr3 62Mb   AFMA163YF1    
3 RP11-154H23 C 3p14.1(FHCRC)
 chr3 71Mb AC097634.2 AFMA176YG9 AQ385849.1*u T7  
3 RP11-179B9 C 3p14.1(FHCRC)
 chr3 64Mb   AFMB306YG5 AQ418281.1 T7,
AQ418279.1 SP6		  
3 CTB-12N15 R 3p13(CSMC)
 chr3 70Mb   MR12352    
3 CTB-8C4 R 3p13(CSMC)
 chr3 70Mb   MR12352    
3 RP11-8M11 C 3p12.1(FHCRC)
 chr3 86Mb   AFM294ZF9, AFM294ZF9*u B72415.1 T7  
3 RP11-129G16 C 3q11.2(FHCRC)
 chr3 102Mb AC018353.14*d AFM126ZC5, AFM126ZC5*u   multiple_placements_on_genome
3 RP11-129G16 C 3q11.2(FHCRC)
 chr3 54Mb AC018353.14 AFM126ZC5*d, AFM126ZC5*u   multiple_placements_on_genome
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
3 RP11-285J14 C 3q11.2~12(FHCRC)
 chr3 95Mb   AFMB304WG9    
3 CTB-9O5 R 3q12.1~12.2(CSMC)
 chr3 100Mb   AFMA065XF5    
3 CTA-395D5 R 3q12(CSMC)
 chr3 101Mb   WI-8558    
3 RP11-16N5 C 3q13.1(FHCRC)
 chr3 106Mb AC023602.5 R13558 B82571.1 T7,
BZ369510.1 T7		  
3 RP11-37D12 C 3q13.1(FHCRC)
 chr3 109Mb   AFM348TE9, AFM348TE9*u    
3 RP11-69N24 C 3q13.1(FHCRC)
 chr3 106Mb   AFM198ZG9, AFM198ZG9*u AQ238438.1 T7,
AQ266920.1 SP6		  
3 RP11-129P2 C 3q13.1~13.2(FHCRC)
 chr3 109Mb AC026323.11*u AFM348TE9, AFM348TE9*u    
3 RP11-166C10 C 3q13.1~13.2(FHCRC)
 chr3 109Mb AC016932.17 AFM225XB12, AFM225XB12*u AQ379897.1*u T7  
3 RP11-12P11 C 3q13.2(FHCRC)
 chr3 112Mb   AFM259VA9 B75962.1 SP6,
B75963.1 T7		  
3 RP11-5K13 C 3q13.2(FHCRC)
 chr3 114Mb   AFM321XF5, AFM321XF5*u B63953.1 SP6,
B63954.1 T7,
B49259.1 T7		  
3 RP11-153K19 C 3q13.2~13.3(FHCRC)
 chr3 114Mb AC021655.21 AFMB353ZE1 AQ386412.1 SP6,
AQ386414.1 T7		  
3 RP11-165B13 C 3q13.3(FHCRC)
 chr3 119Mb AC020650.11 AFMB322ZF1 AQ415251.1 SP6,
AQ382248.1 T7		  
3 RP11-214A5 C 3q13.3(FHCRC)
 chr3 116Mb   AFM164XC5, AFM164XC5*u    
3 RP11-220G20 C 3q13.3(FHCRC)
 chr3 118Mb AC021867.19 AFM057XA5, AFM057XA5*u    
3 RP11-233L3 C 3q13.3(FHCRC)
 chr3 119Mb AC016918.15 AFM225YD6, AFM225YD6*u    
3 RP11-71H17 C 3q13.3(FHCRC)
 chr3 125Mb AC022336.12 AA426227 AQ237037.1 T7,
AQ268576.1 SP6		  
3 RP11-169N13 C 3q13.3~21(FHCRC)
 chr3 120Mb AC069444.17 AFMB280XB1 AQ416519.1 SP6  
3 RP11-217P4 C 3q13.3~21(FHCRC)
 chr3 124Mb   AFM116XH2, AFM116XH2*u    
3 CTA-391E7 R 3q21(CSMC)
 chr3 132Mb   D3S3348    
3 CTB-43D3 R 3q21(CSMC)
 chr3 136Mb   AFM302WA5    
3 RP11-205A6 C 3q21(FHCRC)
 chr3 127Mb AC016924.19 AFM290ZF1, AFM290ZF1*u AQ419300.1 SP6  
3 RP11-59J16 C 3q21(FHCRC)
 chr3 128Mb AC016968.24 AFMB020ZB9 BZ369545.1 SP6,
AQ200043.1 ,
BZ369544.1 T7		  
3 RP11-61K12 C 3q21(FHCRC)
 chr3 128Mb AC011199.22,
AC130566.7		 R11698 AQ194256.1 ,
AQ194259.1 		 
3 RP11-95H16 C 3q21(FHCRC)
 chr3 125Mb AC069233.16 AFM119YH2, AFM119YH2*u AQ315994.1 SP6  
3 RP11-220J13 C 3q22(FHCRC)
 chr3 136Mb AC016919.15 AFM347YG1, AFM347YG1*u    
3 RP11-886L15 R 3q22(UCSF)
 chr3 137Mb   AFM141XA3 AQ526364.1 T7  
3 RP11-219P10 C 3q22~23(FHCRC)
 chr3 137Mb   AFM141XA3    
3 CTA-394C3 R 3q23(CSMC)
 chr3 146Mb   D3S3062    
3 CTB-17D17 R 3q23(CSMC)
 chr3 142Mb   AFMA061YG1    
3 CTB-17G11 R 3q23(CSMC)
 chr3 146Mb   AFMA041ZG9    
3 CTB-2O3 R 3q23(CSMC)
 chr3 137Mb   D3S1549    
3 CTB-43E16 R 3q23(CSMC)
 chr3 142Mb   AFMA061YG1    
3 CTB-5P8 R 3q23(CSMC)
 chr3 138Mb   D3S3617    
3 RP11-162J10 C 3q23(FHCRC)
 chr3 138Mb AC020788.14 AFM267XD9 AQ377322.1 T7,
AQ377319.1 SP6		  
3 CTB-16P22 R 3q24~23(CSMC)
 chr3 144Mb   AFMA106YF9    
3 RP11-160A13 C 3q23~24(FHCRC)
 chr3 144Mb AC020648.11 AFMA106YF9 AQ374615.1 T7,
AQ374613.1 SP6		  
3 RP11-165M11 C 3q23~24(FHCRC)
 chr3 144Mb AC016934.22 AFM240XB2, AFM240XB2*u AQ414594.1 T7  
3 RP11-166D18 C 3q23~24(FHCRC)
 chr3 140Mb AC016933.20 AFMA121WD5 AQ380950.1 T7,
AQ419849.1*u SP6		  
3 CTB-15K2 R 3q24(CSMC)
 chr3 152Mb   D3S1315    
3 CTC-233H16 R 3q24(UCSF)
 chr3 133Mb   D3S3514    
3 RP11-11L20 C 3q24(FHCRC)
 chr3 150Mb AC013626.3,
AC130428.1		 AA459632 B75628.1 T7,
B75627.1 SP6		  
3 RP11-145F16 C 3q24(FHCRC)
 chr3 151Mb AC018545.14 AFM220YH12, AFM220YH12*u AQ375287.1 SP6,
AQ375289.1 T7		  
3 RP11-229G6 C 3q24(FHCRC)
 chr3 150Mb   AFM056XF12, AFM056XF12*u AQ487626.1 SP6,
AQ487627.1*u T7		  
3 RP11-72E23 C 3q24(FHCRC)
 chr3 146Mb AC016967.24 AFM210VE7, AFM210VE7*u AQ267021.1 T7,
AQ285099.1 SP6		  
3 CTA-393C7 R 3q24~25(CSMC)
 chr3 150Mb   D3S3098    
3 RP11-209H21 C 3q24~25(FHCRC)
 chr20 18Mb AC012401.4*d AFM200ZE11*d, AFM200ZE11*u BZ369516.1 T7,
BZ369517.1 SP6		 multiple_placements_on_genome
3 RP11-209H21 C 3q24~25(FHCRC)
 chr3 160Mb AC012401.4 AFM200ZE11, AFM200ZE11*u BZ369516.1*d T7,
BZ369517.1*d SP6		 multiple_placements_on_genome
3 RP11-64F6 C 3q24~25(FHCRC)
 chr3 152Mb   AFM164YG9, AFM164YG9*u AQ241005.1 SP6,
AQ241006.1 T7		  
3 RP11-65L11 C 3q24~25(FHCRC)
 chr3 152Mb   AFM277WF9*u AQ194214.1 ,
AQ237223.1 SP6		  
3 RP11-80I14 C 3q24~25(FHCRC)
 chr3 153Mb   AFM177XE9, AFM177XE9*u AQ282534.1 SP6  
3 CTB-21K12 R 3q25(CSMC)
 chr3 162Mb   AFMA218YG1    
3 CTB-45H21 R 3q25(CSMC)
 chr3 163Mb   AFMB323YB1    
3 CTB-45M11 R 3q25(CSMC)
 chr3 162Mb   AFMA218YG1    
3 CTB-6M15 R 3q25(CSMC)
 chr3 161Mb   AFM164YE7    
3 RP11-203L15 C 3q25~26.1(FHCRC)
 chr3 162Mb AC016920.14 AFMA218YG1 AQ419335.1 SP6,
AQ419337.1 T7		  
3 RP11-141C22 C 3q26.1(FHCRC)
 chr3 170Mb AC067720.15 AFM179XH10, AFM179XH10*u AQ385885.1 SP6,
AQ385887.1 T7		  
3 RP11-198G24 C 3q26.1(FHCRC)
 chr3 165Mb AC018457.14 AFM116XH4    
3 RP11-264D7 C 3q26.1(FHCRC)
 chr3 168Mb AC069530.14 AFMB353YA9 AQ487231.1 T7,
AQ487229.1 SP6		  
3 RP11-67F24 C 3q26.1(FHCRC)
 chr3 161Mb AC026118.17 AI304577 AQ198897.1 ,
AZ518960.1 T7		  
3 RP11-79F11 C 3q26.1(FHCRC)
 chr3 165Mb   AFM116XH4 AQ284158.1 T7,
AQ284155.1 SP6		  
3 CTB-164C23 R 3q26(UCSF)
 chr3 184Mb   WI-6365    
3 RP11-147L6 R 3q26(UCSF)
 chr3 191Mb   d3S2472    
3 RP11-151A21 R 3q26(UCSF)
 chr3 173Mb AC026312.18 D3S2433, AFMA082ZD9 AQ376269.1 SP6,
AQ376270.1 T7		  
3 RP11-153J6 R 3q26(UCSF)
 chr3 171Mb   WI-14970 AQ416537.1 SP6,
AQ389521.1 T7		  
3 RP11-163H6 C 3q26(UCSF)
3q26.2~26.3(FHCRC)
 chr3 173Mb AC020649.9,
AC069259.14		 AFMA082ZD9, WI-18033*d AQ380833.1 T7,
AQ380830.1*u SP6		 multiple_placements_on_genome
3 RP11-163H6 C 3q26(UCSF)
3q26.2~26.3(FHCRC)
 chr3 182Mb AC020649.9*d,
AC069259.14*d		 WI-18033, AFMA082ZD9*d AQ380833.1*d T7,
AQ380830.1*u SP6		 multiple_placements_on_genome
3 RP11-178A9 R 3q26(UCSF)
 chr3 179Mb   AFMA110YE9    
3 RP11-198D7 R 3q26(UCSF)
 chr3 174Mb   AFM164TC7, AFM164TC7*u AQ416866.1 T7,
AQ416864.1 SP6		  
3 RP11-202K4 R 3q26(UCSF)
 chr3 171Mb   D3S1564, AFM224YA3, D3S3723    
3 RP11-212J11 R 3q26(UCSF)
 chr3 179Mb   AFMA110YE9 AQ482478.1*u SP6  
3 RP11-234D2 R 3q26(UCSF)
 chr3 173Mb AC026322.12 AFMA064YC1*d, D3S1754*d   multiple_placements_on_genome
3 RP11-234D2 R 3q26(UCSF)
 chr3 178Mb AC026322.12*d AFMA064YC1, D3S1754   multiple_placements_on_genome
3 RP11-25D9 R 3q26(UCSF)
 chr3 173Mb   AFMA082ZD9 AQ013478.1 ,
B82068.1 T7,
AQ013480.1 ,
B82067.1 SP6		  
3 RP11-301K17 R 3q26(UCSF)
 chr3 171Mb   D3S3114    
3 RP11-315C21 R 3q26(UCSF)
 chr3 171Mb   D3S3723 AQ538509.1 T7,
AQ538508.1 SP6		  
3 RP11-333L12 R 3q26(UCSF)
       D3S3037*u    
3 RP11-350E2 R 3q26(UCSF)
 chr3 178Mb   WI-1347 AZ516352.1 T7  
3 RP11-361D1 R 3q26(UCSF)
 chr3 171Mb   D3S1564 AQ542065.1 T7,
AQ542064.1 SP6		  
3 RP11-383C10 R 3q26(UCSF)
 chr3 83Mb   D3S1254    
3 RP11-41J24 R 3q26(UCSF)
 chr3 177Mb   D3S3676 AQ029707.1*u T7  
3 RP11-45I24 R 3q26(UCSF)
 chr3 180Mb AC015620.3 AFMA162XB9, WI-16592 AQ201243.1 ,
AQ201245.1 		 
3 RP11-517E12 R 3q26(UCSF)
 chr3 178Mb   D3S3097    
3 RP11-51A1 R 3q26(UCSF)
 chr3 180Mb AC007653.5 AFMA162XB9 BH900376.1 T7,
AQ052255.1 ,
BH900377.1 SP6		  
3 RP11-58C19 R 3q26(UCSF)
 chr3 173Mb   AFM333YA5 AQ195902.1  
3 CTB-50E20 R 3q26.2(CSMC)
 chr3 171Mb   D3S3723    
3 RP11-148D23 C 3q26.2(FHCRC)
 chr3 174Mb   AFM224ZB12, AFM224ZB12*u AQ375695.1 SP6,
AQ375698.1 T7		  
3 RP11-151P12 C 3q26.2(FHCRC)
 chr3 171Mb   D3S1564, AFM224YA3 AQ379734.1 SP6,
AQ379735.1 T7		  
3 RP11-24L16 C 3q26.2(FHCRC)
 chr3 169Mb   AFM345TH5, AFM345TH5*u    
3 RP11-33A1 C 3q26.2~26.3(FHCRC)
 chr3 170Mb AC007480.3,
AC130425.1		 AA181023 AQ045438.1 ,
AQ045437.1 		 
3 RP11-196F13 CR 3q26.2c~26.31a(NCI)
3q26.3(FHCRC)
 chr3 173Mb AC016938.24 AFM333YA5    
3 CTB-56B5 R 3q26.3(CSMC)
 chr3 180Mb   AFMA162XB9    
3 RP11-114M1 C 3q26.3(FHCRC)
 chr3 178Mb AC026355.13 AFMA064YC1 AQ345488.1 T7,
AQ345485.1 SP6		  
3 RP11-172G5 C 3q26.3(FHCRC)
 chr3 174Mb AC018456.18 AFM164TC7, AFM164TC7*u AQ422718.1 SP6  
3 RP11-82C9 C 3q26.3(FHCRC)
 chr3 170Mb AC078985.14 AFM179XH10, AFM179XH10*u    
3 RP11-89B3 C 3q26.3(FHCRC)
 chr3 180Mb   AFMA162XB9 AZ517716.1 T7  
3 RP11-118F4 C 3q26.3~27(FHCRC)
 chr3 180Mb AC048335.10 AFMA162XB9 AQ349290.1 SP6  
3 RP11-125E8 C 3q26.3~27(FHCRC)
 chr3 185Mb AC078797.20 D3S3609    
3 CTA-242B1 R 3q27(CSMC)
       CHLC.GGAT11G03*u    
3 CTA-358G6 R 3q27(CSMC)
 chr3 189Mb   D3S3651    
3 CTA-433E10 R 3q27(CSMC)
 chr3 185Mb   D3S3609    
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
3 CTB-47H7 R 3q27(CSMC)
 chr3 185Mb   AFMA217ZH5    
3 CTB-47I8 R 3q27(CSMC)
 chr3 185Mb   AFMA217ZH5    
3 RP11-63G1 C 3q27(FHCRC)
 chr3 185Mb   SHGC-35471 AQ196287.1 ,
AQ196285.1 		 
3 RP11-63M3 C 3q27(FHCRC)
 chr3 185Mb   SHGC-35471 AQ201780.1 ,
AQ201778.1 		 
3 RP11-12L14 CR 3q27.1a(NCI)
3q27~28(FHCRC)
 chr3 184Mb AC013631.2,
AC130417.1		 T69473 B75882.1 SP6,
B75883.1 T7		  
3 RP11-328G15 C 3q27~28(FHCRC)
 chr3 185Mb AC112643.12 X75208    
3 CTB-44G24 R 3q28(CSMC)
 chr3 189Mb   MR12372    
3 RP11-101H7 C 3q28(FHCRC)
 chr3 193Mb AC024692.3,
AC092876.2		 H19129 AQ320092.1 T7  
3 RP11-11K22 C 3q28(FHCRC)
 chr3 193Mb   AFM308YF1, AFM308YF1*u B75608.1 T7,
B73175.1 SP6		  
3 RP11-135A1 C 3q28(FHCRC)
 chr3 195Mb AC080129.26 AA459983 AQ379137.1 SP6  
3 RP11-178K17 C 3q28(FHCRC)
 chr3 190Mb AC018898.17 AFM164ZF8    
3 RP11-386D17 C 3q28(FHCRC)
 chr3 185Mb   AA479058    
3 RP11-53D15 C 3q28(FHCRC)
 chr3 191Mb AC016966.19 AFM207YD8, AFM207YD8*u AQ053018.1*u  
3 RP11-54L9 C 3q28(FHCRC)
 chr3 191Mb AC073963.10 AFM260YB1, AFM260YB1*u AQ115238.1 ,
AQ081612.1 		 
3 RP11-67E18 C 3q28(FHCRC)
 chr3 189Mb AC055711.18 AFM270ZG9, AFM270ZG9*u AQ201693.1  
3 RP11-88M1 C 3q28(FHCRC)
 chr3 193Mb AC055742.18*u AFM308YF1, AFM308YF1*u    
3 RP11-233N20 C 3q29(FHCRC)
 chr3 198Mb   AFM136XC1, AFM136XC1*u    
total210C:113 R:101 S:0210198 8621093 

1 Distributor: C, Children's hospical Oakland research institute; R, Research Genetics; S, Sanger Center

2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.

4 Sequence-tag

  *d indicates sequences that disagree with placement on the genome.

  *u indicates seqeunces that didn't align to the genome or were not used for annotation because the clone was placed to multiple locations on the human genome.