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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones


FISH chr: FISH data source:
Clone distributor:
Sequence tag: Show details on sequence-tag:
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Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
6 RP11-24N8 C 6p25(FHCRC)
 chr6 5Mb   AFM088YH3 B84490.1 SP6,
AQ013586.1 		 
6 RP11-420G6 C 6p25(FHCRC)
 chr6 2Mb AL139092.12   AQ548935.1 SP6,
AQ548945.1 T7		  
6 RP11-42D22 C 6p25(FHCRC)
 chr6 1Mb   AFM092XB7 AQ115105.1  
6 RP11-79M24 C 6p25(FHCRC)
 chr6 1Mb     AZ519770.1 SP6,
AQ283284.1 SP6,
AQ581538.1 SP6,
AQ629697.1 T7,
AQ283287.1 T7		  
6 RP11-90P11 C 6p25(FHCRC)
 chr6 1Mb     AQ285240.1 SP6,
AZ518671.1 T7,
AQ285242.1 T7		  
6 RP11-91F13 C 6p25(FHCRC)
 chr6 3Mb     AQ283340.1 SP6,
AZ519290.1 T7,
AQ283342.1 T7		  
6 RP11-53P21 C 6p24~25(FHCRC)
 chr6 1Mb   AFMA074ZD1*d AQ052009.1 multiple_placements_on_genome
6 RP11-53P21 C 6p24~25(FHCRC)
 chr6 4Mb   AFMA074ZD1 AQ052009.1*d multiple_placements_on_genome
6 RP11-556O15 RS 6p24.1~25.3(SC)
6p25.1a~25.1b(NCI)
 chr6 6Mb AL139390.15   CL423079.1 T7,
CL423074.1 SP6		  
6 RP11-69L16 C 6p24~25(FHCRC)
 chr6 7Mb AL139095.15 AA757764 AQ266886.1 SP6,
AQ238396.1 T7		  
6 RP11-91C13 C 6p24~25(FHCRC)
 chr6 7Mb     AQ286357.1 T7,
AQ286356.1 SP6		  
6 RP11-16N9 R 6p25.3a(NCI)
 chr6 1Mb AC012350.3   B81763.1 SP6,
B82575.1 T7		  
6 RP11-60B13 S 6p24.1~25.2(SC)
 chr6 10Mb   D6S351E*u AQ198202.1 ,
AQ198199.1*u 		 
6 RP11-63N14 S 6p23~25.2(SC)
 chr6 10Mb   stSG54574 AQ238541.1 SP6,
AQ238542.1 T7		  
6 RP11-299J5 R 6p25.2a(NCI)
 chr6 2Mb AL359852.20   AQ504936.1 T7,
AQ504935.1 SP6		  
6 RP11-15N12 R 6p25.1c~25.2a(NCI)
 chr6 3Mb AL160398.27   B76583.1 T7,
B76582.1 SP6		  
6 RP11-174N20 S 6p24.1~25.1(SC)
 chr6 8Mb   AFM203XE11 AQ412420.1 SP6,
AQ412423.1 T7		  
6 RP11-153K12 C 6p24(FHCRC)
 chr6 8Mb   AFM203XE11, AFM203XE11*u AQ387361.1 T7,
AQ387360.1 SP6		  
6 RP11-168G4 C 6p24(FHCRC)
 chr6 6Mb   AFMA341YB1 AQ420749.1 SP6  
6 RP11-177C16 C 6p24(FHCRC)
 chr6 7Mb   AFMA132YF5 AQ415537.1 T7,
AQ415536.1 SP6		  
6 RP11-1J24 C 6p24(FHCRC)
 chr6 7Mb AC015754.2 AFM296ZB1 B63554.1 SP6,
B63235.1 T7		  
6 RP11-89L9 C 6p24(FHCRC)
 chr6 9Mb     AQ284822.1 T7,
AQ284807.1 SP6		  
6 RP11-79C16 C 6p23~24(FHCRC)
 chr6 9Mb     AQ282464.1 SP6,
AZ519150.1 SP6,
AQ282466.1 T7		  
6 RP11-79L3 C 6p23~24(FHCRC)
 chr6 12Mb     AQ284946.1 T7,
AQ284942.1 SP6		  
6 RP11-79M3 C 6p23~24(FHCRC)
 chr6 12Mb     AQ281995.1 T7,
AZ519106.1 SP6,
AQ317613.1 SP6		  
6 RP11-27F12 RS 6p22.3~24(SC)
6p23b(NCI)
 chr6 14Mb AC011917.2,
AL109914.16		   CL423113.1 T7,
B87071.1 T7,
CL423108.1 SP6		  
6 RP11-686D16 RS 6p22.3~24.3(SC)
6p22.3e(NCI)
 chr6 19Mb AL357052.15   CL423176.1 T7  
6 RP11-12I14 R 6p24.3a~24.3b(NCI)
 chr6 9Mb AL139387.12   B75830.1 SP6,
B75831.1 T7		  
6 RP11-15I14 R 6p24.3a(NCI)
 chr6 10Mb AL138877.4   B83514.1 SP6,
B76472.1 SP6,
B83515.1 T7,
B76473.1 T7		  
6 RP11-124B11 R 6p24.1a(NCI)
 chr6 12Mb AL391829.9   AQ343398.1 SP6,
AQ343399.1 T7		  
6 RP11-113K20 C 6p23(FHCRC)
 chr6 15Mb   AFMB296XG5 AQ341444.1 T7  
6 RP11-126J14 C 6p23(FHCRC)
 chr6 13Mb   AFMA306ZH5 AQ353803.1 SP6,
AQ353804.1 T7		  
6 RP11-1G10 C 6p23(FHCRC)
 chr6 14Mb AC015469.3 AA111969 B48359.1 SP6,
AQ312934.1 T7		  
6 RP11-90I11 C 6p23(FHCRC)
 chr6 14Mb     AQ281673.1 SP6,
AQ281675.1 T7		  
6 RP11-90M17 CR 6p22.3~23(FHCRC)
6p22.3e(NCI)
 chr6 17Mb     AQ284392.1 T7,
AQ284389.1 SP6		  
6 RP11-14H3 CR 6p22~23(FHCRC)
 chr6 17Mb AL138824.19   CL423147.1*d T7,
B81659.1*u SP6		 multiple_placements_on_genome
6 RP11-14H3 CR 6p22~23(FHCRC)
 chr6 14Mb AL138824.19*d   CL423147.1 T7,
B81659.1*u SP6		 multiple_placements_on_genome
6 RP11-204B7 C 6p22~23(FHCRC)
 chr6 18Mb AL589723.7   AQ417587.1 T7,
AQ417585.1 SP6		  
6 RP11-43B4 C 6p22~23(FHCRC)
 chr6 20Mb AL355346.7 AFMA059ZE1 AQ193992.1  
6 RP11-273J1 C 6p22.3(FHCRC)
 chr6 22Mb   AFMA045XH1 AQ508178.1 SP6,
AZ517913.1 T7		  
6 RP11-3D15 C 6p22.3(FHCRC)
 chr6 21Mb   AFMA340ZB5 B63743.1 SP6,
B63744.1 T7		  
6 RP11-53I19 C 6p22.3(FHCRC)
 chr6 23Mb   AFMB355WG5 AQ051846.1 ,
AQ051859.1 		 
6 RP11-91N3 C 6p22.3(FHCRC)
 chr6 16Mb     AQ284181.1 SP6,
AQ284184.1 T7,
AZ519349.1 T7		  
6 RP11-91P3 6p22.3(FHCRC)
 chr2 40Mb     AQ284250.1 T7,
AQ284247.1 SP6		  
6 RP11-145M23 C 6p22(FHCRC)
 chr6 24Mb   AFMA183WB5 AQ372376.1 SP6  
6 RP11-159C8 C 6p22(FHCRC)
 chr6 20Mb   AFM234XA3, AFMB321WB5, AFM234XA3*u, AFM234XA3*u AQ376191.1 SP6,
AQ376192.1 T7		  
6 RP11-163E21 C 6p22(FHCRC)
 chr6 16Mb   AFMA288ZG9 AQ377759.1 SP6,
AQ377760.1 T7		  
6 RP11-52C20 C 6p22(FHCRC)
 chr6 23Mb   AFMA052VH1, AFM217XG7, AFM217XG7*u AQ056920.1 ,
AQ056918.1 		 
6 RP11-79B19 C 6p22(FHCRC)
 chr6 21Mb     AQ284049.1 SP6,
AQ284050.1*u T7		  
6 RP11-88H24 C 6p22(FHCRC)
 chr6 24Mb     AZ516259.1 T7,
AQ280953.1 T7,
AQ280951.1 SP6		  
6 RP11-89B4 C 6p22(FHCRC)
 chr6 24Mb     AZ517849.1 T7,
AQ285677.1 T7,
AQ285675.1*u SP6		  
6 RP11-91H17 C 6p22(FHCRC)
 chr6 23Mb   AFM217XG7, AFM217XG7*u AQ283413.1 T7,
AQ283410.1 SP6		  
6 RP11-10A19 CR 6p21.32b(NCI)
6p22(FHCRC)
 chr6 32Mb AC022567.2   B72694.1 SP6,
B72695.1 T7		  
6 RP11-33I5 R 6p22.3c(NCI)
 chr6 22Mb AL360158.18   AQ046175.1 ,
CL423041.1 T7,
CL423038.1 SP6		  
6 CTD-2104E23 C 6p22.2(FHCRC)
         AQ724264.1*u T7  
6 RP11-104P20 S 6p21.32~22.2(SC)
 chr6 26Mb   stSG24641 AQ315354.1 SP6,
AQ315360.1 T7		  
6 RP11-183F3 S 6p21.32~22.2(SC)
 chr6 26Mb   stbA318I12SP6 AQ418802.1 SP6,
AQ418804.1 T7		  
6 RP11-230P13 S 6p21.32~22.2(SC)
 chr6 26Mb   stSG24645 AQ489577.1 SP6  
6 RP11-23L20 S 6p21.32~22.2(SC)
 chr4 24Mb     AQ013894.1 ,
B88758.1 T7,
AQ013896.1 ,
B88185.1*u SP6		  
6 RP11-2P4 C 6p22.1(FHCRC)
 chr6 27Mb AC010804.1*u AFM248XH1, AFM248XH1*u B47865.1 SP6,
B47866.1 T7		  
6 RP11-451M2 C 6p22.1(FHCRC)
 chr6 27Mb     AQ584036.1 SP6,
AQ584039.1 T7		  
6 RP11-88D2 C 6p22.1(FHCRC)
 chr6 28Mb     AQ286620.1 SP6,
AQ286622.1 T7		  
6 RP11-150A6 R 6p22.1b(NCI)
 chr6 29Mb AL096770.17   AQ377649.1 SP6,
AQ377651.1 T7		  
6 RP11-119C22 C 6p21.3(FHCRC)
 chr6 33Mb   AFMB293XF9 AQ349987.1 T7,
AQ349985.1 SP6		  
6 RP11-54H13 C 6p21.3(FHCRC)
 chr6 32Mb   AFMC019YC5 AQ115180.1 ,
AQ081579.1 		 
6 RP11-71C20 S 6p21.31~21.33(SC)
 chr6 31Mb   stD6S1124E.1 AQ236601.1*d SP6 multiple_placements_on_genome
6 RP11-71C20 S 6p21.31~21.33(SC)
 chr6 30Mb   stD6S1124E.1*d AQ236601.1 SP6 multiple_placements_on_genome
6 RP11-79I1 C 6p21.3(FHCRC)
 chr6 33Mb     AQ283696.1 T7  
6 RP11-139J19 C 6p21.2~21.3(FHCRC)
 chr6 36Mb   AFM203YG7, AFM203YG7*u AQ349343.1*u T7  
6 RP11-197P9 C 6p21.2~21.3(FHCRC)
 chr6 35Mb   AFM268XE1, AFM268XE1*u AQ416819.1 T7,
AQ416816.1*u SP6		  
6 RP11-346J19 C 6p21.2~21.3(FHCRC)
 chr6 32Mb AC009833.3   AQ528151.1 T7,
AQ528148.1 SP6		  
6 RP11-79J17 C 6p21.2~21.3(FHCRC)
 chr6 32Mb     AQ284306.1 SP6,
AQ284309.1 T7		  
6 RP11-79J23 C 6p21.2~21.3(FHCRC)
 chr6 34Mb     AQ284317.1 SP6,
AQ284318.1 T7		  
6 CTD-2118F18 C 6p21(UCSF)
6p21.2(FHCRC)
 chr6 36Mb     AQ567672.1 T7  
6 CTD-2122A15 R 6p21(UCSF)
         AQ672641.1*u T7  
6 CTD-2199F18 R 6p21(UCSF)
 chr6 37Mb     AQ145588.1 SP6,
AQ151440.1 T7		  
6 RP11-413D16 RS 6p11.2~21(SC)
6p12.3b(NCI)
 chr6 49Mb AL356586.13   AQ550686.1 T7,
AQ550683.1 SP6		  
6 RP11-175A4 RS 6p21.1~21.32(SC)
6p21.32a(NCI)
 chr6 33Mb AL161903.19   AQ412450.1 SP6,
AQ412453.1 T7		  
6 RP11-425A7 S 6p21.1~21.31(SC)
 chr6 34Mb   stbA425A7SP6 AQ551777.1 SP6  
6 RP11-375E1 R 6p21.31c(NCI)
 chr6 34Mb AL157372.18,
BX255972.1,
BX255973.1		   CL423071.1 T7,
CL423068.1 SP6		  
6 RP11-52A1 R 6p21.2c(NCI)
 chr6 36Mb AC011191.3   AQ056955.1 ,
AQ056948.1 		 
6 CTD-2130B14 R 6p21.2(UCSF)
         AQ661851.1*u SP6,
AQ678463.1*u T7		  
6 RP11-117C11 C 6p21.2(FHCRC)
 chr6 43Mb AC026532.3 AA132086 AQ347771.1 T7,
AQ347331.1*u SP6		  
6 RP11-133J6 C 6p21.2(FHCRC)
 chr6 39Mb   AFM337YD1, AFMB024YG1 AQ350892.1 SP6,
AQ350893.1 T7		  
6 RP11-136C6 C 6p21.2(FHCRC)
 chr6 39Mb AL451185.14 AFM337YD1, AFMB024YG1 AQ346000.1 T7,
AQ382914.1 SP6		  
6 RP11-14G23 CR 6p21.2(FHCRC)
6p21.2b(NCI)
 chr6 40Mb AC011679.3 AFMB014YF5 B76277.1 T7,
B76276.1 SP6		  
6 RP11-629J17 C 6p21.2(FHCRC)
 chr6 32Mb AC026010.3 AI004331, AA630549*u AQ430621.1*u SP6  
6 RP11-79J5 C 6p21.2(FHCRC)
 chr6 41Mb     AQ284270.1 SP6,
AQ284273.1 T7		  
6 RP11-91E11 C 6p21.2(FHCRC)
 chr6 37Mb     AQ281304.1 T7,
AQ281303.1 SP6		  
6 RP11-79I2 C 6p21.1~21.2(FHCRC)
 chr6 43Mb     AZ519174.1 SP6,
AQ283086.1 SP6,
AQ629634.1 T7,
AQ283089.1 T7		  
6 RP11-298J23 R 6p21.1h(NCI)
 chr6 41Mb AL365205.35   BH367109.1 T7,
CL423184.1 T7,
CL423177.1 SP6		  
6 RP11-121G20 C 6p21.1(FHCRC)
 chr6 44Mb   AFMB334YG9 AQ343663.1 SP6,
AQ343664.1 T7		  
6 RP11-79G12 C 6p21.1(FHCRC)
 chr6 44Mb     AQ629614.1 T7,
AQ581365.1 SP6,
AQ581367.1*u T7		  
6 RP11-81F7 C 6p21.1(FHCRC)
 chr6 43Mb   AFM298WE1, AFM298WE1*u AQ281093.1 T7,
AZ521558.1 T7,
AQ281091.1 SP6		  
6 RP11-90K15 C 6p21.1(FHCRC)
 chr6 52Mb     AQ283509.1 T7,
AQ283505.1 SP6		  
6 RP11-91H14 C 6p21.1(FHCRC)
 chr6 43Mb   AFM298WE1, AFM298WE1*u AQ285194.1 SP6,
AQ285197.1 T7		  
6 RP11-79F13 CR 6p21.1(FHCRC)
6p21.1a~12.3f(NCI)
 chr6 44Mb AC023013.3,
AL512379.5		   AQ284162.1 T7,
AQ284160.1 SP6		  
6 RP11-120K22 RS 6p11.2~21.1(SC)
6p12.1c(NCI)
 chr6 55Mb AL137178.7   AQ350429.1 SP6,
AQ350432.1 T7		  
6 RP11-22I24 R 6p21.1d(NCI)
 chr6 43Mb AL353602.10   AQ009376.1 T7,
B86273.1 SP6		  
6 RP11-111P16 C 6p12(FHCRC)
 chr6 55Mb   AFM240YD6, AFM240YD6*u AQ342593.1 T7,
AQ320048.1 SP6		  
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
6 RP11-39C2 CR 6p12(FHCRC)
6p12.3f(NCI)
 chr6 47Mb AL355518.20 AFM301WB9, AFM301WB9*u AQ029979.1 T7,
CL423045.1 T7,
CL423042.1 SP6		  
6 RP11-58P9 C 6p12(FHCRC)
 chr6 48Mb   AFM015XG5 AQ200480.1 ,
AQ200482.1*u 		 
6 RP11-7H16 C 6p12(FHCRC)
 chr6 53Mb   AFMB283WE9 B72055.1 SP6,
B72056.1 T7		  
6 RP11-89L17 C 6p12(FHCRC)
 chr6 45Mb AL391118.13   AQ284843.1 SP6,
AQ284845.1 T7		  
6 RP11-90H17 C 6p12(FHCRC)
 chr6 46Mb     AQ284305.1 SP6,
AZ518494.1 T7,
AQ284308.1 T7		  
6 RP11-96J19 C 6p12(FHCRC)
 chr6 53Mb AC019053.3,
AL591034.5		   AQ314239.1 T7,
AQ314237.1 SP6		  
6 RP11-79O24 C 6p11.2~12(FHCRC)
 chr6 56Mb     AQ283349.1 SP6,
AQ629724.1 T7		  
6 RP11-91E17 C 6p11.2~12(FHCRC)
 chr6 55Mb     AQ281330.1 T7,
AQ281318.1 SP6		  
6 RP11-93F3 C 6p11.2~12(FHCRC)
 chr6 32Mb AC011086.5 AA634028 AQ282075.1*d SP6,
AQ323702.1*d T7		 multiple_placements_on_genome
6 RP11-93F3 C 6p11.2~12(FHCRC)
 chr2 164Mb AC011086.5*d AA634028*d AQ323702.1 T7,
AQ282075.1 SP6		 multiple_placements_on_genome
6 RP11-156F16 S 6p11.1~12.3(SC)
 chr6 50Mb AL138826.15   AQ389473.1 SP6  
6 RP11-23E24 R 6p12.3d(NCI)
 chr6 48Mb AC018651.4   B88668.1 T7,
AQ014233.1 		 
6 RP11-362K18 RS 6p11.1~12.2(SC)
6p12.1d(NCI)
 chr6 54Mb AL365328.18   CL423073.1 SP6,
CL423078.1 T7		  
6 RP11-146B10 C 6p12.1(FHCRC)
 chr6 55Mb   AFMB314WH5 AQ374498.1 T7,
AQ374496.1*d SP6		 multiple_placements_on_genome
6 RP11-146B10 C 6p12.1(FHCRC)
 chr6 30Mb   AFMB314WH5*d AQ374496.1 SP6,
AQ374498.1*d T7		 multiple_placements_on_genome
6 RP11-89D6 C 6p11.1~6q11(FHCRC)
 chr6 57Mb     AQ285731.1 T7  
6 RP11-164C22 C 6q11.1~11.2(FHCRC)
 chr6 62Mb   AFMA054ZH9 AQ378441.1 T7,
AQ378437.1 SP6		  
6 RP11-349P19 S 6q11.1~12(SC)
 chr6 65Mb AL357375.13   AQ528638.1 SP6,
AQ528653.1 T7		  
6 CTD-2009C6 C 6q12(FHCRC)
 chr6 64Mb     B53178.1 SP6,
AQ228560.1 T7,
AQ232305.1*u SP6		  
6 RP11-50D22 C 6q12(FHCRC)
 chr6 69Mb   SHGC-20945*u AQ052673.1  
6 RP11-79F21 C 6q12(FHCRC)
 chr6 64Mb     AQ284188.1 T7,
AQ284185.1 SP6		  
6 RP11-80L16 C 6q12(FHCRC)
 chr6 67Mb     AQ284167.1 T7,
AQ317817.1*u SP6		  
6 RP11-88N6 C 6q12(FHCRC)
 chr6 64Mb     AZ516870.1 T7,
AQ281534.1 T7,
AZ516868.1 SP6		  
6 RP11-121K16 C 6q12~13(FHCRC)
 chr6 72Mb   AFM343VC1 AQ344286.1 T7,
AQ344282.1 SP6		  
6 RP11-156I14 S 6q12~13(SC)
 chr6 71Mb AL450320.4 stSG6304 AQ388434.1*u SP6  
6 RP11-2M9 C 6q12~13(FHCRC)
 chr6 71Mb   AFM295TB3 B47839.1 T7,
B47838.1 SP6		  
6 RP11-13B22 R 6q12d(NCI)
 chr6 66Mb AL450319.4   CL423112.1 T7,
CL423107.1 SP6,
B75997.1 SP6		  
6 RP11-29F4 R 6q12g~13a(NCI)
 chr6 71Mb AC024971.2   B85005.1 T7,
B85004.1 SP6		  
6 RP11-90G9 C 6q13(FHCRC)
 chr6 72Mb     AQ281606.1 T7,
AQ281602.1 SP6		  
6 RP11-28P18 C 6q13~14(FHCRC)
 chr6 75Mb AC024325.3 AFMB352WC1 AQ003481.1 SP6,
B87472.1 T7		  
6 RP11-536I19 RS 6q13~14.3(SC)
6q14.1e(NCI)
 chr6 83Mb AL139333.10   CL423175.1 T7  
6 RP11-79B1 C 6q13~14(FHCRC)
 chr6 86Mb     AQ283352.1 SP6,
AQ283355.1 T7		  
6 RP11-592J5 R 6q13c(NCI)
 chr6 74Mb AC068247.2   AQ335804.1 SP6,
AQ335719.1*u T7		  
6 CTD-2090G18 C 6q14(FHCRC)
 chr6 87Mb     AQ597543.1 T7  
6 RP11-177G23 S 6q14.1~14.3(SC)
 chr6 80Mb AL451064.6 stSG28754 AQ415302.1*u SP6  
6 RP11-188E7 S 6q14.1~14.3(SC)
 chr6 80Mb AL450316.7 stSG6381 AQ417342.1 T7  
6 RP11-217L13 CR 6q14(FHCRC)
6q14.1b(NCI)
 chr6 79Mb AC027616.3 AFM191XA3, AFM191XA3*u CL423143.1 SP6,
CL423146.1 T7		  
6 RP11-260A11 C 6q14(FHCRC)
 chr6 84Mb   AFMB307XF1 AQ484647.1 SP6,
AQ484649.1 T7		  
6 RP11-79L15 C 6q14(FHCRC)
 chr6 78Mb     AQ284998.1 T7,
AQ284995.1 SP6		  
6 RP11-111J1 S 6q14.1~15(SC)
 chr6 87Mb AC034141.4,
AL357272.10		   AQ341407.1 SP6,
AQ341409.1 T7		  
6 RP11-15J23 S 6q14.1~15(SC)
 chr6 87Mb AL391417.7 stbA48I23A B76507.1 T7,
B76506.1 SP6		  
6 RP11-43O2 RS 6q14.1~15(SC)
6q14.3b(NCI)
 chr6 87Mb AL390125.23 stbA15J23T7 AQ199712.1  
6 RP11-48I23 S 6q14.1~15(SC)
 chr6 87Mb   stbA48I23A AQ202995.1 ,
AQ202994.1 		 
6 RP11-52B15 C 6q14~15(FHCRC)
 chr6 89Mb   AFMB321ZB1 AQ115701.1  
6 RP11-79G3 C 6q14~15(FHCRC)
 chr6 85Mb     AZ520727.1 SP6,
AQ283434.1 SP6,
AQ283437.1 T7		  
6 RP11-25P5 R 6q14.1d(NCI)
 chr6 81Mb AC016012.5   AQ013491.1 ,
B82157.1 T7		  
6 RP11-232L4 S 6q14.2~16.1(SC)
 chr6 83Mb     AQ485020.1 SP6,
AQ485023.1*d T7		 multiple_placements_on_genome
6 RP11-232L4 S 6q14.2~16.1(SC)
 chr6 147Mb     AQ485023.1 T7,
AQ485020.1*d SP6		 multiple_placements_on_genome
6 RP11-18O9 R 6q14.3a(NCI)
 chr6 86Mb AC021687.4   B85521.1 SP6,
B85522.1 T7		  
6 RP11-113K7 C 6q15(FHCRC)
 chr6 91Mb   AFMB296XH1 AQ351471.1 T7,
AQ351469.1 SP6		  
6 RP11-32O2 C 6q15(FHCRC)
 chr6 85Mb   AFM199ZF12 AQ047312.1  
6 RP11-13I21 C 6q15~16.1(FHCRC)
 chr6 91Mb   AFMA223WD9 B73280.1 T7,
AZ521098.1 SP6		  
6 RP11-386J20 RS 6q15~16.3(SC)
6q16.1d~16.1e(NCI)
 chr6 96Mb AL356303.6   CL423067.1 SP6,
CL423070.1 T7		  
6 RP11-63L7 C 6q15~16(FHCRC)
 chr6 89Mb AL353135.32 AFMB321ZB1, AA669637 AQ199245.1  
6 RP11-12B13 R 6q15c(NCI)
 chr6 89Mb AL139090.11   B75711.1 SP6,
AZ301780.1*u T7		  
6 RP11-63K6 R 6q15d(NCI)
 chr6 90Mb AL353692.14   AQ203078.1 ,
CL423036.1 SP6,
CL423037.1 T7,
AQ203080.1 		 
6 RP11-91G4 C 6q16.1(FHCRC)
 chr6 93Mb     AQ285562.1 SP6,
AQ285565.1 T7		  
6 RP11-14G17 C 6q16.1~16.2(FHCRC)
 chr6 99Mb   AFM119YB6 B76269.1 SP6,
B76270.1 T7		  
6 CTD-2045C13 R 6q16(UCSF)
 chr1 62Mb     B80271.1 SP6,
B80270.1 ,
AQ306988.1*u SP6,
AQ307029.1*u T7		  
6 RP11-14I4 C 6q16(FHCRC)
 chr6 100Mb AL590732.7 AFM288VG5 B81668.1 SP6,
B85287.1 T7		  
6 RP11-484P14 C 6q16(FHCRC)
 chr6 100Mb AL357622.7   AQ632577.1 T7,
AQ632575.1 SP6		  
6 RP11-67P19 C 6q16(FHCRC)
 chr6 95Mb   AFMA099YH5 AQ203113.1 ,
AQ203115.1 		 
6 RP11-79F23 C 6q16(FHCRC)
 chr6 95Mb     AQ284192.1 T7,
AQ284190.1 SP6		  
6 RP11-79G15 C 6q16(FHCRC)
 chr6 99Mb   AFM119YB6 AQ283488.1 T7,
AZ519040.1 SP6,
AQ283486.1 SP6		  
6 RP11-79K22 C 6q16(FHCRC)
 chr6 101Mb AP006201.1   AQ581480.1 T7,
AQ283210.1 T7,
AZ519187.1 SP6,
AQ283208.1 SP6,
AQ581479.1 SP6		  
6 RP11-79M13 C 6q16(FHCRC)
 chr6 100Mb     AQ282314.1 T7,
AZ519116.1 SP6,
AQ317646.1 SP6		  
6 RP11-79O12 C 6q16(FHCRC)
 chr6 102Mb     AZ519775.1 SP6,
AQ283317.1 SP6,
AQ283320.1 T7,
AQ629701.1 T7		  
6 RP11-89M3 C 6q16(FHCRC)
 chr6 95Mb   AFM191XD4 AQ286096.1 SP6  
6 RP11-90O11 C 6q16(FHCRC)
 chr6 101Mb     AQ284453.1 SP6,
AQ284456.1 T7		  
6 RP11-460L11 C 6q16~21(FHCRC)
 chr6 105Mb AL590402.10   AQ582127.1 T7  
6 RP11-47E20 C 6q16~21(FHCRC)
 chr6 105Mb   AFM164YA5 AQ199397.1 ,
AQ199394.1 		 
6 RP11-81B13 C 6q16~21(FHCRC)
 chr6 88Mb     AQ280967.1 T7,
AZ521506.1 T7,
AQ280965.1 SP6,
AZ521504.1 SP6		  
6 RP11-22L21 R 6q16.1e(NCI)
 chr6 97Mb AL159985.11   B86323.1 SP6,
AQ009070.1 T7,
B86324.1 T7		  
6 RP11-355M14 S 6q16.2~21(SC)
 chr6 105Mb AL356775.14   AQ533917.1*u T7  
6 RP11-142E21 R 6q16.3a(NCI)
 chr6 101Mb AL356434.2   AQ389028.1 T7,
AQ389027.1 SP6		  
6 RP11-73D20 C 6q16.3(FHCRC)
 chr6 102Mb   AFM123YA7, AFM123YA7*u AQ267518.1 SP6  
6 RP11-88H8 C 6q16.3(FHCRC)
 chr6 102Mb     AZ516228.1 T7,
AQ286775.1 T7,
AQ286772.1 SP6,
AZ516227.1 SP6		  
6 RP11-404H14 RS 6q16.3~21(SC)
6q21a(NCI)
 chr6 106Mb AL356859.12   CL423103.1 SP6,
CL423106.1 T7		  
6 RP11-89H8 C 6q16.3~21(FHCRC)
 chr6 104Mb     AQ285886.1 T7,
AQ285883.1*u SP6		  
6 RP11-165E15 C 6q21(FHCRC)
 chr6 108Mb   AFM162XC3 AQ414255.1 T7,
AQ414254.1 SP6		  
6 RP11-787I22 C 6q21(FHCRC)
 chr6 109Mb AL390208.17   AQ454918.1 SP6,
AQ499946.1*u T7		  
6 RP11-79L7 C 6q21(FHCRC)
 chr6 106Mb     AQ284958.1 SP6,
AQ284962.1 T7		  
6 RP11-91B17 C 6q21(FHCRC)
 chr6 108Mb     AQ283245.1 SP6,
AQ283246.1 T7,
AZ518765.1*u T7		  
6 RP11-390H10 RS 6q21~22.1(SC)
6q22.1b(NCI)
 chr6 114Mb AL356425.5   CL423077.1 T7,
CL423072.1 SP6		  
6 RP11-51N24 C 6q21~22.1(FHCRC)
 chr6 113Mb   AFM102XF12, AFM102XF12*u AZ518848.1 T7,
AQ056923.1 		 
6 RP11-75C8 C 6q21~22.1(FHCRC)
 chr6 112Mb   AFM224YB4, AFM224YB4*u AQ267155.1 T7,
AQ266594.1 SP6		  
6 RP11-79I12 C 6q21~22.1(FHCRC)
 chr6 113Mb     AQ283116.1 SP6,
AZ519178.1 SP6,
AQ283119.1 T7,
AQ629638.1 T7,
AQ581409.1*u T7		  
6 RP11-510G24 RS 6q21~22.2(SC)
6q22.1c(NCI)
 chr6 115Mb AL449303.10 stdJ230G15SP6 CL423111.1 T7  
6 RP11-213A17 S 6q21~22.31(SC)
 chr6 118Mb AC025203.5,
AC091161.2,
AL590303.9		   AQ482708.1 T7,
AQ482707.1 SP6		  
6 RP11-59F18 C 6q21~22(FHCRC)
 chr6 113Mb   AFM260YC1 AQ199952.1 ,
AQ199953.1 		 
6 RP11-91C23 C 6q21~22(FHCRC)
 chr6 115Mb     AZ518703.1 T7,
AQ318739.1 SP6		  
6 RP11-249L21 R 6q21d(NCI)
 chr6 109Mb AL445189.7   AQ485474.1 SP6,
CL423137.1 SP6,
CL423140.1 T7		  
6 RP11-237B9 R 6q21h(NCI)
 chr6 111Mb AC040894.1   AQ481465.1 T7,
AQ481463.1 SP6		  
6 RP11-149M1 C 6q22.1(FHCRC)
 chr6 119Mb   AFM238ZD4, AFM238ZD4*u AQ377186.1 T7,
AQ377184.1*u SP6		  
6 RP11-24F12 C 6q22.1(FHCRC)
 chr6 115Mb   AFM301ZB1 AQ013509.1 ,
B86610.1 SP6		 multiple_placements_on_genome
6 RP11-24F12 C 6q22.1(FHCRC)
 chr6 0Mb   AFM301ZB1 AQ013509.1 ,
B86610.1*d SP6		 multiple_placements_on_genome
6 RP11-28L24 C 6q22.1(FHCRC)
 chr6 112Mb   AFM211ZE5, AFM211ZE5*u AQ003445.1 SP6,
B87392.1 T7		  
6 RP11-59D10 C 6q22.1(FHCRC)
 chr6 120Mb   AFMB019WD9 AQ199851.1 ,
AQ199855.1 		 
6 RP11-411H20 S 6q22.1~22.31(SC)
 chr6 118Mb AL355356.4   BH608587.1 SP6,
BH608586.1 T7		  
6 CTD-2126K7 R 6q22(UCSF)
 chr6 100Mb     AQ603564.1 T7,
AQ603740.1 SP6		  
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
6 CTD-2272G18 R 6q22(UCSF)
 chr6 135Mb     AQ741078.1 SP6,
AQ745558.1*u T7		  
6 RP11-167I10 C 6q22(FHCRC)
 chr6 123Mb AL603902.4 AA404293 AQ382596.1 SP6,
AQ382599.1 T7		  
6 RP11-231F3 C 6q22(FHCRC)
 chr6 125Mb   AFM199ZH10 AQ490526.1 T7,
AQ490525.1*u SP6		  
6 RP11-79A17 C 6q22(FHCRC)
 chr6 118Mb     AZ520671.1 SP6,
AQ282205.1 SP6		  
6 RP11-79F1 C 6q22(FHCRC)
 chr6 135Mb     AQ284118.1 SP6,
AQ284121.1 T7		  
6 RP11-80B14 C 6q22(FHCRC)
 chr6 123Mb     AQ283252.1 T7,
AQ283244.1 SP6		  
6 RP11-90K21 C 6q22(FHCRC)
 chr6 123Mb     AQ283712.1 T7,
AQ283710.1 SP6		  
6 RP11-451M16 C 6q22~23(FHCRC)
 chr6 136Mb     AQ584087.1 T7  
6 RP11-28K19 C 6q22.2~22.3(FHCRC)
 chr6 119Mb   AFM198ZE1, AFM198ZE1*u, AFM198ZE1*u B87366.1 SP6,
B87367.1 T7		  
6 RP11-61K10 R 6q22.31a(NCI)
 chr6 118Mb AL355479.10,
AL449196.1		   AQ194253.1 ,
CL423145.1 T7,
CL423142.1 SP6,
AQ194250.1 		 
6 RP11-107M3 C 6q22.3(FHCRC)
 chr6 128Mb   AFM198WG11, AFM198WG11*u AQ319996.1 SP6  
6 RP11-138M12 S 6q22.31~22.33(SC)
 chr6 125Mb AL450332.19 stbA138M12SP6*u AQ384197.1 T7,
AQ384195.1 SP6		  
6 RP11-332F24 RS 6q22.31~22.33(SC)
6q22.31e(NCI)
 chr6 126Mb AL389919.10 stHey2seq*u CL423174.1 T7,
CL423171.1 SP6		  
6 RP11-325O24 R 6q22.33a(NCI)
 chr6 128Mb AL356432.17   AQ537046.1 T7,
AQ537040.1 SP6		  
6 RP11-368O13 S 6q22.33~23.3(SC)
 chr6 133Mb     AQ543861.1 SP6,
AQ543864.1 T7		  
6 RP11-162O22 S 6q22.33~24.1(SC)
 chr6 133Mb     AQ375406.1 T7,
AQ375404.1*u SP6		  
6 RP11-593A16 R 6q22.33c(NCI)
 chr6 130Mb AL356579.24   AQ337490.1 T7,
AQ337646.1 SP6		  
6 RP11-139O22 C 6q23.1~23.2(FHCRC)
 chr6 131Mb   AFM059YD6, AFM059YD6*u AQ383246.1 T7,
AQ383243.1 SP6		  
6 RP11-89G8 C 6q23(FHCRC)
 chr6 136Mb     AQ282818.1 T7,
AQ282816.1 SP6		  
6 CTD-2015J17 C 6q23~24(FHCRC)
 chr6 137Mb     B66826.1 ,
AQ226549.1 SP6,
AQ305087.1*u T7		  
6 RP11-104D9 C 6q23~24(FHCRC)
 chr6 135Mb     AQ313139.1 SP6,
AQ313142.1 T7		  
6 RP11-89A10 C 6q23~24(FHCRC)
 chr6 141Mb AL590486.9   AQ286831.1 SP6,
AQ286842.1 T7		  
6 RP11-91G15 C 6q23~24(FHCRC)
 chr6 137Mb     AQ281395.1 T7,
AQ281393.1 SP6		  
6 RP11-456H15 R 6q23.2a(NCI)
 chr6 131Mb AL353776.7   CL423035.1 SP6,
CL423040.1 T7,
AQ584535.1 T7		  
6 RP11-177M14 C 6q23.2(FHCRC)
 chr6 133Mb   AFMA052VF1 AQ417110.1 SP6,
AQ417111.1 T7		  
6 RP11-54P6 C 6q23.2(FHCRC)
 chr6 134Mb   AFMA102YA5 AQ082824.1 ,
AQ082823.1 		 
6 RP11-133O15 RS 6q23.2~24.3(SC)
6q23.3c(NCI)
 chr6 138Mb AC036236.2   AZ521467.1 SP6,
AQ384440.1 T7		  
6 RP11-484K19 RS 6q23.2~24.3(SC)
6q24.1d~24.2a(NCI)
 chr6 143Mb AL355307.11   CL423069.1 T7,
CL423066.1 SP6		  
6 RP11-435E4 R 6q23.2b(NCI)
 chr6 132Mb AL357505.7   AQ585671.1 SP6,
AQ553522.1 T7		  
6 RP11-15H7 CR 6q24.1(FHCRC)
6q24.1a(NCI)
 chr6 139Mb AL390205.17 AFM254XH1, AFM254XH1*u B75337.1 T7,
B75336.1 SP6		  
6 CTD-2202H16 R 6q24(UCSF)
 chr6 135Mb     AQ210484.1 T7,
AQ151326.1 SP6		  
6 RP11-69I8 C 6q24(FHCRC)
 chr6 132Mb AL354866.10 AA598794 AQ237340.1 SP6,
AQ237342.1 T7		  
6 RP11-89B12 C 6q24(FHCRC)
 chr6 139Mb     AQ285693.1 T7,
AQ285691.1*u SP6		  
6 RP11-89E10 C 6q24(FHCRC)
 chr1 197Mb     AQ282738.1 SP6,
AQ282741.1 T7,
AZ517014.1 T7		  
6 RP11-89F9 C 6q24(FHCRC)
 chr6 141Mb     AQ283827.1 T7,
AQ283826.1 SP6		  
6 RP11-291C6 RS 6q24.1~25.1(SC)
6q25.1b(NCI)
 chr6 150Mb AL451061.8 stbA136K14SP6 CL423136.1 SP6,
CL423139.1 T7		  
6 RP11-30G19 R 6q24.1b(NCI)
 chr6 141Mb AL591515.2*u   B87783.1 T7,
B87782.1 SP6		  
6 RP11-43G16 R 6q24.2c~24.3a(NCI)
 chr6 145Mb AL357376.16   CL423105.1 T7,
CL423102.1 SP6,
AQ199386.1 		 
6 RP11-715G15 R 6q24.3b(NCI)
 chr6 146Mb AL359547.26   AQ513028.1 SP6,
AQ517664.1 T7		  
6 CTD-2057J2 C 6q25(FHCRC)
 chr6 152Mb     AQ246100.1 T7,
AQ901485.1 T7,
AQ243715.1 SP6		  
6 RP11-535A9 RS 6q25.1~25.3(SC)
6q25.2b(NCI)
 chr6 153Mb AL356963.17   CL423188.1 SP6,
CL423355.1 T7		  
6 RP11-71B1 S 6q25.1~25.3(SC)
 chr6 151Mb     AQ267866.1 SP6  
6 RP11-108N8 R 6q25.1c~25.2a(NCI)
 chr6 151Mb AL590543.8   AQ319280.1 T7,
AQ349563.1 SP6		  
6 RP11-20H19 C 6q25.2(FHCRC)
 chr6 155Mb   AFMA133XA5, AFMA133XA5*u AQ008162.1 SP6,
B88781.1 SP6,
B85662.1 T7		  
6 RP11-8D1 C 6q25.2(FHCRC)
 chr6 157Mb AC011218.4*u   B71411.1 T7,
B71410.1 SP6		  
6 RP11-193H22 RS 6q25.2~26(SC)
6q25.3b(NCI)
 chr6 157Mb AL450328.6 D6S1007 CL423033.1 T7  
6 RP11-266C7 S 6q25.2~26(SC)
 chr6 158Mb AL139330.17   AQ488078.1 SP6,
AQ488081.1 T7		  
6 RP11-455I14 R 6q25.2c(NCI)
 chr6 155Mb AL355343.18   AQ587199.1 T7  
6 RP11-13P5 R 6q25.3d(NCI)
 chr6 159Mb AL356417.17   B75190.1 SP6,
B75191.1 T7		  
6 RP11-43B19 C 6q26(FHCRC)
 chr6 160Mb   AFMA244XC9 AQ200346.1 ,
AQ200345.1 		 
6 RP11-81H13 C 6q26(FHCRC)
 chr6 161Mb     AZ521602.1 SP6,
AQ286884.1 SP6,
AZ521604.1 T7,
AQ286885.1 T7		  
6 RP11-88B24 C 6q26(FHCRC)
 chr6 159Mb     AZ516128.1 T7,
AQ286618.1 T7,
AQ286616.1 SP6		  
6 RP11-91I3 C 6q26(FHCRC)
 chr6 157Mb     AQ281427.1 SP6,
AQ281429.1 T7		  
6 RP11-104N13 S 6q26~27(SC)
 chr6 164Mb AL589727.4 D6S1456 AQ314016.1*u T7  
6 RP11-351J23 S 6q26~27(SC)
 chr6 167Mb AL356123.21   AQ528259.1 SP6,
AQ528301.1 T7		 multiple_placements_on_genome
6 RP11-351J23 S 6q26~27(SC)
 chr6 0Mb AL356123.21*d   AQ528259.1 SP6,
AQ528301.1 T7		 multiple_placements_on_genome
6 RP11-794H3 C 6q27(FHCRC)
 chr6 170Mb     AQ493169.1 SP6,
AQ515022.1 T7		  
6 RP11-91O16 C 6q27(FHCRC)
 chr6 167Mb     AQ283185.1 SP6,
AQ283186.1 T7		  
6 RP11-37D8 R 6q27d(NCI)
 chr6 168Mb AL442124.6   CL423144.1 T7,
CL423141.1 SP6		  
total251C:160 R:70 S:47251248 10197251 

1 Distributor: C, Children's hospical Oakland research institute; R, Research Genetics; S, Sanger Center

2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.

4 Sequence-tag

  *d indicates sequences that disagree with placement on the genome.

  *u indicates seqeunces that didn't align to the genome or were not used for annotation because the clone was placed to multiple locations on the human genome.