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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones


FISH chr: FISH data source:
Clone distributor:
Sequence tag: Show details on sequence-tag:
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Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
X RP11-294K6 C Xp22.3(FHCRC)
 chrX 6Mb   DXS7517 AQ508405.1 SP6,
AZ254432.1*u T7,
AZ254433.1*u SP6,
AQ508407.1*u T7		  
X RP11-383I22 CR Xp22.3(FHCRC)
Xp22.31d~22.31e(NCI)
 chrX 9Mb   DXS1375 CL423317.1 T7,
CL423315.1 SP6,
AQ533276.1 SP6		  
X RP11-483M24 C Xp22.3(FHCRC)
 chrX 6Mb AC073583.19 RH38708 AZ254650.2 T7,
AQ628840.1 SP6,
AZ254651.2 SP6		  
X RP11-366M24 R Xp22.32b(NCI)
 chrX 5Mb AC078956.19 DXS1118E AZ303248.2 SP6,
AZ303247.2 T7		  
X RP11-128B23 C Xp22.2(FHCRC)
 chrX 18Mb   SHGC-3864    
X RP11-143E20 C Xp22.2(FHCRC)
 chrX 7Mb AC074034.19,
AC148216.1		 SHGC-6734 AQ389732.1 SP6,
AQ389735.1 T7		  
X RP11-2K15 C Xp22.2(FHCRC)
 chrX 16Mb AL732371.4 SHGC-33363*u B48592.1 SP6,
B48593.1 T7		  
X RP11-308F2 R Xp22.2(NCI)
 chrX 14Mb   DXS7951 CL423280.1 SP6,
CL423284.1 T7		  
X RP11-382D24 R Xp22.2(NCI)
 chrX 12Mb   DXS7730 AZ254489.2 T7,
AZ254490.2 SP6		  
X RP11-449M18 C Xp22.2(FHCRC)
 chrX 15Mb AC096510.11 DXS7723 AZ254519.2 T7,
AQ584100.1 T7,
AZ254520.2 SP6,
AQ584097.1*u SP6		  
X RP11-180F16 C Xp22.1~22.2(FHCRC)
 chrX 19Mb   SHGC-21205    
X RP11-507P24 CR Xp22.1~22.2(FHCRC)
Xp22.12a~22.12b(NCI)
 chrX 20Mb   DXS7786 AZ303290.2 T7,
AZ515683.1*u SP6		  
X RP11-568P9 R Xp22.13d~22.13e(NCI)
 chrX 17Mb   DXS7793 AZ254682.2 T7,
AZ303377.2 SP6		  
X CTB-55J7 R Xp22.1(CSMC)
 chrX 17Mb   DXS1195    
X RP11-124B4 C Xp22.1(FHCRC)
 chrX 14Mb   SHGC-194*u AQ344260.1 T7,
AQ344256.1 SP6		  
X RP11-270O2 C Xp22.1(FHCRC)
 chrX 15Mb   AFM164ZD4, AFM164ZD4*u    
X RP11-48D14 C Xp22.1(FHCRC)
 chrX 20Mb AL732596.2 AFM337WD5, AFM337WD5*u AQ200610.1 ,
AQ200606.1 		 
X RP11-482C1 CR Xp21~22.1(FHCRC)
Xp22.12b(NCI)
 chrX 19Mb   DXS8264*u AZ303227.2 T7,
AQ629987.1 T7,
AQ629984.1 SP6,
AZ303228.2 SP6		  
X RP11-497C10 CR Xp21~22.1(FHCRC)
Xp22.12a(NCI)
 chrX 21Mb   DXS7480 AZ254653.2 SP6,
AZ254652.2 T7		  
X RP11-124H12 C Xp21(FHCRC)
 chrX 31Mb   AFM217XA5 AQ345143.1 SP6,
AQ345146.1 T7		  
X RP11-338L12 CR Xp21(FHCRC)
 chrX 31Mb   RH26866 AZ254454.1*u T7,
AZ254455.1*u SP6		  
X RP11-357F9 C Xp21(FHCRC)
 chrX 32Mb   DXS7029E AQ539311.1 SP6,
AQ539313.1 T7,
AZ254467.1*u T7,
AZ254468.1*u SP6		  
X RP11-377J16 C Xp21(FHCRC)
 chrX 31Mb   DXS7630 AZ254471.1*u T7,
AZ254472.1*u SP6		  
X RP11-480I16 C Xp21(FHCRC)
 chrX 30Mb   DXS1096 AZ303303.2 T7,
AZ303287.2 SP6		  
X RP11-487M22 CR Xp21(FHCRC)
Xp21.3b(NCI)
 chrX 28Mb   DXS7926 AZ301104.2 T7,
AQ631865.1 T7,
AZ301105.2 SP6		  
X RP11-509C1 CR Xp21(FHCRC)
Xp21.1e~21.2a(NCI)
 chrX 31Mb   DXS7826 AZ303291.2 T7,
AZ303292.2 SP6		  
X RP11-291H16 C Xp11.4~21(FHCRC)
       RH63518*u    
X RP11-429N5 CR Xp11.4~21(FHCRC)
Xp11.4d~11.4e(NCI)
 chrX 39Mb   SWXD3103 AZ254511.2 T7,
AQ551510.1 T7,
AQ551497.1 SP6,
AZ254512.2 SP6		  
X RP11-495K15 CR Xp11.4~21(FHCRC)
Xp21.1a(NCI)
 chrX 37Mb   RH35775 AZ303207.2 T7,
AZ303208.2 SP6		  
X RP11-70D7 C Xp11.4~21(FHCRC)
 chrX 34Mb   SHGC-6614 AQ236808.1 SP6  
X RP11-46A23 CR Xp21.2(FHCRC)
Xp21.2(NCI)
 chrX 31Mb   SHGC-1505 AQ198399.1 ,
AQ198403.1 		 
X RP1-195M21 S Xp11.4~21.2(SC)
 chrX 37Mb   DXS6680    
X RP11-469E19 S Xp11.4~21.2(SC)
 chrX 40Mb AL391259.15 SGC34697    
X RP13-46M24 S Xp11.4~21.2(SC)
 chrX 36Mb AL590285.10 stFSX915    
X RP11-122N14 C Xp21.1(FHCRC)
 chrX 31Mb AC079175.24 SHGC-8333 AZ520209.1 T7,
AQ345063.1 SP6		  
X RP11-120F17 S Xp11.3~21.1(SC)
 chrX 38Mb   stSG74605 AQ351135.1 T7,
AQ351131.1*u SP6		  
X RP11-252K10 S Xp11.3~21.1(SC)
 chrX 42Mb AL590074.3 SHGC-18105 AZ517450.1 SP6,
AQ491831.1 T7		  
X RP11-506C6 CR Xp11.4(FHCRC)
Xp11.4e(NCI)
 chrX 38Mb   DXS7611 AZ303203.2 T7,
AZ303204.2 SP6		  
X RP1-107N10 S Xp11.3~11.4(SC)
 chrX 40Mb   stSG40560    
X RP11-258I23 C Xp11.3~11.4(FHCRC)
 chrX 41Mb AC073076.1 AFM203WF4, SHGC-366    
X RP11-299D7 CR Xp11.3~11.4(FHCRC)
Xp11.4a(NCI)
 chrX 40Mb   RH38747 AQ504705.1 SP6,
AZ254436.1*u T7,
AZ254437.1*u SP6		  
X RP11-39E13 C Xp11.3~11.4(FHCRC)
 chrX 41Mb   SHGC-366    
X RP5-1075M17 S Xp11.3~11.4(SC)
 chrX 38Mb   sWXD881    
X RP1-160K15 S Xp11(SC)
 chrX 39Mb   AFM200YE7    
X RP1-191L2 S Xp11(SC)
 chrX 117Mb   stSG14861    
X CTD-2051F22 C Xp11.3(FHCRC)
 chrX 43Mb   Hs.2839    
X RP11-24P8 C Xp11.3(FHCRC)
 chrX 42Mb AC023994.2 SHGC-18105 AQ013935.1 ,
B84503.1 SP6		  
X RP11-512H22 C Xp11.3(FHCRC)
 chrX 42Mb   DXS6722 AZ254656.2 T7  
X RP11-517F20 C Xp11.3(FHCRC)
 chrX 47Mb   DXS1338 AZ301107.2 SP6,
AZ301106.2 T7		  
X RP11-531L8 CR Xp11.3(FHCRC)
Xp11.3a(NCI)
 chrX 44Mb   RH16599 AZ303205.2 T7,
AZ303206.2 SP6		  
X RP11-8G18 C Xp11.3(FHCRC)
 chrX 46Mb   SHGC-1313 B72330.1 SP6  
X RP11-466C12 CR Xp11.23f(NCI)
Xp11.3(FHCRC)
 chrX 47Mb   DXS7629 AZ254479.3 T7,
AQ635914.1 SP6,
AZ254480.2 SP6		  
X RP1-89P19 S Xp11.22~11.3(SC)
 chrX 49Mb   AFM119XD6, AFM119XD6*u    
X RP11-56H2 S Xp11.22~11.3(SC)
 chrX 51Mb AL390060.14 A005Q38, A005Q38*u AQ082008.1  
X RP11-287E8 C Xp11.2~11.3(FHCRC)
 chrX 37Mb   SHGC-36486    
X RP11-8A2 C Xp11.2~11.3(FHCRC)
 chrX 48Mb AC027819.2 H61193    
X RP11-17K17 CS Xp11.1~11.2(FHCRC)
Xp11.1~11.3(SC)
 chrX 51Mb AC027066.3 SHGC-24010 B82753.1 T7,
B82752.1 SP6		  
X RP11-384A17 R Xp11.3b(NCI)
 chrX 43Mb   RH63518*u AZ254494.2 SP6,
AQ533314.1 T7,
AZ254493.2 T7		  
X RP11-104D21 S Xp11.21~11.23(SC)
 chrX 50Mb AL441923.9 H67553 AQ313289.1 T7  
X RP11-107C19 C Xp11.2(FHCRC)
 chrX 48Mb   SHGC-11027, SHGC-31984 AQ318992.1 SP6,
AQ318994.1 T7		  
X RP11-126A13 C Xp11.2(FHCRC)
 chrX 55Mb   AFM151XF6, AFM151XF6*u AQ345109.1 SP6,
AQ345112.1 T7		  
X RP11-292J24 CR Xp11.2(FHCRC)
Xp11.21a(NCI)
 chrX 54Mb   DXS7159E AZ301091.2 T7,
CL423347.1 T7,
CL423344.1 SP6		  
X RP11-528A24 CR Xp11.2(FHCRC)
Xp11.22c~11.23a(NCI)
 chrX 48Mb   DXS1331*u AZ301109.2 SP6,
AZ301108.2 T7		  
X RP11-58H17 S Xp11.21~11.23(SC)
 chrX 49Mb   sts-AA032156 AQ200240.1 ,
AQ200238.1 		 
X RP11-266I3 S Xcen~Xp11.22(SC)
 chrX 55Mb AL590240.5 WI-21209 AQ488926.1 SP6,
AQ488929.1 T7		  
X RP11-353K22 S Xcen~Xp11.22(SC)
 chrX 54Mb AL391139.19 WI-19377 AQ533597.1 SP6,
AQ533599.1 T7		  
X RP11-431N15 CRS Xp11.1~11.22(SC)
Xp11.1a(NCI)
 chrX 56Mb AL354793.11 RH25723 AZ254513.2 T7,
AZ254514.2 SP6		  
X RP11-465B24 S Xp11.1~11.22(SC)
 chrX 56Mb AL356058.39 RH25723 AQ581842.1 SP6,
AQ581843.1 T7		  
X RP13-69J2 S Xp11.1~11.22(SC)
 chrX 58Mb AL391096.10*u stFSX268    
X RP11-22D19 S Xq11.1~12(SC)
 chrX 63Mb AL591765.13 stFSX1812 AQ008947.1 T7  
X RP11-30M20 CS Xq11.2~13.1(SC)
Xq11~12(FHCRC)
 chrX 65Mb AL139276.17 AFM282ZA9    
X RP11-479J1 CS Xq11.1~13.3(SC)
Xq13(FHCRC)
 chrX 66Mb AL158016.15 DXS1397 AZ303302.2 SP6,
AZ303301.2 T7		  
X RP11-434B14 CR Xq11.1b(NCI)
Xq12(FHCRC)
 chrX 64Mb   DXS7086 AZ254515.2 T7,
AQ552291.1 T7,
AQ552290.1 SP6,
AZ254516.2 SP6		 multiple_placements_on_genome
X RP11-434B14 CR Xq11.1b(NCI)
Xq12(FHCRC)
 chrY 57Mb   DXS7086*d AQ552290.1 SP6,
AZ254516.2 SP6,
AZ254515.2*d T7,
AQ552291.1*d T7		 multiple_placements_on_genome
X RP11-51L20 C Xq11.2~12(FHCRC)
 chrX 71Mb   RP_S4X AZ518288.1 T7,
AQ053721.1 		 
X RP11-147G1 C Xq12(FHCRC)
 chrX 64Mb   SHGC-32201 AQ376372.1 T7  
X RP11-149I10 C Xq12(FHCRC)
       SHGC-9393*u    
X RP11-90P17 C Xq12(FHCRC)
 chrX 66Mb   SHGC-9393*u AZ518679.1 T7,
AQ285259.1 T7,
AQ285256.1 SP6		  
X RP11-204D21 C Xq12~13(FHCRC)
 chrX 68Mb   AFM287ZG1 AQ417669.1 T7,
AQ417666.1 SP6		  
X RP11-419G1 CR Xq12a(NCI)
Xq13(FHCRC)
 chrX 67Mb   DXS7838 AZ254505.2 T7,
AZ254506.2 SP6		  
X RP6-90M1 S Xq12~13(SC)
 chrX 70Mb   DXS8030    
X CTA-401C7 R Xq13(CSMC)
 chrX 73Mb   DXS8079    
X CTB-12M22 R Xq13(CSMC)
 chrX 70Mb   AFMA060ZA9    
X CTB-13P17 R Xq13(CSMC)
 chrX 74Mb   AFMA040YE1    
X CTB-40L8 R Xq13(CSMC)
 chrX 72Mb   AFMB337WE9    
X CTB-40L9 R Xq13(CSMC)
 chrX 72Mb   AFMB337WE9    
X CTB-40M5 R Xq13(CSMC)
 chrX 72Mb   AFMB337WE9    
X CTB-40M6 R Xq13(CSMC)
 chrX 72Mb   AFMB337WE9    
X RP11-177A4 C Xq13(FHCRC)
 chrX 69Mb   SHGC-4660 AQ415505.1 SP6,
AQ415506.1 T7		  
X RP11-17P24 S Xq13.1~13.3(SC)
 chrX 74Mb AL590234.7 stSG13246    
X RP11-183F2 C Xq13(FHCRC)
 chrX 69Mb   AFM078ZA1, AFM078ZA1*u    
X RP11-523P2 S Xq13.1~13.3(SC)
 chrX 71Mb AL596457.6 RP_S4X    
X RP3-420M23 S Xq13.1~13.3(SC)
 chrX 53Mb   WI-12365    
X RP11-136A22 S Xq13.1~21.1(SC)
 chrX 71Mb   stSG30461*u AQ382910.1 SP6  
X RP13-183A17 S Xq13.1~21.1(SC)
 chrX 72Mb AL450994.1 WI-11090    
X RP11-451F6 CR Xq13.2a(NCI)
Xq13~21(FHCRC)
 chrX 73Mb   DXS1103E AZ254477.2 T7,
AZ254478.2 SP6,
AQ586104.1*u SP6		  
X RP11-566L6 C Xq13~21(FHCRC)
 chr8 69Mb   DXS7722*d AZ254679.2 SP6,
AZ254678.2 T7		 multiple_placements_on_genome
X RP11-566L6 C Xq13~21(FHCRC)
 chrX 73Mb   DXS7722 AZ254678.2*d T7,
AZ254679.2*d SP6		 multiple_placements_on_genome
X RP6-142P24 S Xq13.1~21.33(SC)
 chrX 87Mb   DXS1050    
X RP11-402P6 R Xq13.1d(NCI)
 chrX 70Mb BX276092.9 DXS1517*u AZ254497.2 T7,
AZ254498.2 SP6		  
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
X RP11-436L1 R Xq13.1e(NCI)
 chrX 71Mb   DXS1377 AZ254646.2 SP6,
AZ254645.2 T7		  
X RP11-324B6 S Xq13.2~21.1(SC)
 chrX 74Mb AL391495.16 stbA369J21SP6*u    
X RP11-518C21 CS Xq13.2~21.1(SC)
Xq21.1(FHCRC)
 chrX 78Mb AL157825.12 DXS1420 AZ254662.2 SP6,
AZ254661.2 T7		  
X RP6-153H5 S Xq13.2~21.1(SC)
 chrX 75Mb   DXS1502    
X RP11-159L8 S Xq13.2~21.2(SC)
 chrX 78Mb AL590222.4 stbA159L8SP6 AQ374012.1 T7,
AQ374010.1 SP6		  
X RP11-569G10 S Xq13.2~21.2(SC)
       GDB:636353*u    
X RP11-212E16 S Xq13.2~21.31(SC)
 chrX 77Mb AC027428.1*u stdJ198G23T7    
X RP11-236O12 S Xq13.3~21.2(SC)
 chrX 74Mb AL589167.10 stFSX235    
X RP11-249E10 S Xq13.3~21.2(SC)
 chrX 79Mb AC034288.2 stSG69069*u    
X RP11-306E15 S Xq13.3~21.2(SC)
 chrX 79Mb AL592563.7 sWXD3439    
X RP11-409H15 S Xq13.3~21.2(SC)
 chrX 71Mb   sWXD389    
X RP11-477B2 R Xq13.3b(NCI)
 chrX 75Mb   DXS1383 AZ254486.2 SP6,
AQ636732.1 SP6,
AZ254485.2 T7,
AQ636735.1 T7		  
X RP11-297K23 R Xq21.1a~21.1b(NCI)
 chrX 78Mb   DXS6954 AZ254434.1*u T7,
AZ254435.1*u SP6		  
X RP1-221O17 S Xq21.1(SC)
 chrX 76Mb   DXS56, DXS56*u, DXS56*u    
X RP11-246G22 C Xq21.1(FHCRC)
 chrX 82Mb   AFM207ZG5, AFM207ZG5*u AQ478262.1 T7,
AQ478259.1 SP6		  
X RP11-353A12 C Xq21.1(FHCRC)
 chrX 78Mb   DXS6954 AQ532998.1 T7  
X RP11-91J20 C Xq21.1(FHCRC)
 chrX 74Mb   SHGC-36950 AQ285278.1 SP6,
AQ285281.1 T7		  
X RP11-54F22 RS Xq21.1~21.31(SC)
Xq21.1d(NCI)
 chrX 83Mb AL389887.7 DXS7135 AQ082140.1 ,
AQ082142.1 T7		  
X RP11-479E16 S Xq21.1~21.32(SC)
 chrX 57Mb AL606754.6 DXS8275 AQ628671.1 T7,
AQ628668.1 SP6		  
X RP1-2O7 S Xq21.1~21.33(SC)
 chrX 87Mb   stFSX1764    
X RP11-145I17 S Xq21.1~21.33(SC)
 chrX 86Mb AL590236.8 stFSX369    
X RP11-192B18 S Xq21.1~21.33(SC)
 chrX 86Mb AL590229.3 DXS7518    
X RP11-336F4 CR Xq21(FHCRC)
 chrX 83Mb   DXS1519 AZ254450.1*u T7,
AZ254451.1*u SP6		  
X RP11-349D15 C Xq21(FHCRC)
 chrX 94Mb AL591342.1 DXS1398 AQ527497.1 T7,
AQ527465.1 SP6		  
X RP11-567N15 CR Xq21(FHCRC)
Xq21.31b(NCI)
 chrX 87Mb   DXS7695 AZ254681.2 SP6,
AZ254680.2 T7		  
X RP4-795F12 S Xq21.1~21.33(SC)
 chrX 87Mb   stSG51398    
X RP5-1037N19 S Xq21.1~21.33(SC)
 chrX 88Mb   stSG51391    
X RP5-866A5 S Xq21.1~21.33(SC)
 chrX 70Mb   SHGC-16181    
X RP6-118N16 S Xq21.1~21.33(SC)
 chrX 87Mb   AFM308xb9    
X RP6-143C16 S Xq21.1~21.33(SC)
 chrX 86Mb   stSG51397    
X RP6-216C14 S Xq21.1~21.33(SC)
 chrX 88Mb   stSG51391    
X RP1-34L20 S Xq21~22(SC)
 chrX 103Mb   stSG41241    
X RP1-38A21 S Xq21~22(SC)
 chrX 84Mb   stSG3942    
X RP11-506F15 C Xq21~22(FHCRC)
 chrX 99Mb   DXS1323*u AZ303219.2 T7,
AZ303220.2 SP6		  
X RP11-517D12 C Xq21~22(FHCRC)
 chrX 95Mb   DXS7479    
X RP11-379J18 CR Xq21.3(FHCRC)
Xq21.33c~21.33d(NCI)
 chrX 97Mb   DXS1465 AQ533759.1 T7,
AQ533757.1 SP6,
AZ254473.1*u T7,
AZ254474.1*u SP6		  
X RP11-77D22 C Xq21.3(FHCRC)
 chrX 92Mb   AFM136YC7, AFM136YC7*u AQ285337.1 SP6  
X RP11-449F11 S Xq21.31~22.1(SC)
 chrX 96Mb AL446026.5 stFSX1284 AQ585017.1 T7,
AQ584388.1*u SP6		  
X RP11-223K4 C Xq21.3~22(FHCRC)
 chrX 102Mb   AFM263WE1, SHGC-21230, AFM263WE1*u    
X RP11-270O24 C Xq21.3~22(FHCRC)
 chrX 99Mb   SHGC-13881    
X RP11-467H14 CR Xq21.3~22(FHCRC)
Xq22.1b~22.1c(NCI)
 chrX 101Mb   sWXD3584 AZ254649.2 SP6,
AQ630970.1 SP6,
AZ254648.2 T7,
AQ630973.1 T7		  
X RP11-483J19 R Xq21.32a(NCI)
 chrX 92Mb   DXS7552 AZ303289.2 SP6,
AQ629407.1 SP6,
AQ629410.1 T7,
AZ303288.2 T7		  
X RP11-402K9 S Xq21.32~22.2(SC)
 chrX 99Mb AL359641.10 stFSX808    
X RP11-163C23 S Xq21.33~22.3(SC)
 chrX 103Mb   stdJ324P21SP6 AQ377738.1 SP6,
AQ377739.1 T7		  
X RP11-227B10 S Xq21.33~22.3(SC)
 chrX 98Mb AL590293.3 sWXD1479    
X RP3-489F1 S Xq21.33~22.3(SC)
 chrX 103Mb   DXS8075    
X RP4-663P11 S Xq21.33~22.3(SC)
 chrX 103Mb   sWXD2844    
X RP4-777L12 S Xq21.33~22.3(SC)
 chrX 103Mb   stSG49025    
X RP11-40K1 S Xq21.33~23(SC)
 chrX 103Mb AL442225.1,
AL442226.1		 stSG81882 AQ030128.1 ,
AZ517480.1*u T7		  
X RP11-335H4 R Xq21.33b~21.33c(NCI)
 chrX 94Mb   DXS1398 AZ254448.1*u T7,
AZ254449.1*u SP6		  
X RP11-508G21 CR Xq21.33d~22.1a(NCI)
Xq22~23(FHCRC)
 chrX 99Mb   DXS7735 AZ303375.2 SP6,
AZ515684.2 T7		  
X CTA-373H5 R Xq22.1(CSMC)
 chrX 100Mb   AFM337TG9    
X CTB-20K20 R Xq22(CSMC)
 chrX 111Mb   AFMA162YC9    
X RP1-148H18 S Xq22(SC)
 chrX 102Mb   stSG45655    
X RP1-218B13 S Xq22(SC)
 chrX 112Mb AC002072.1 stdJ874H6SP6    
X RP1-6C24 S Xq22(SC)
 chrX 110Mb   stdJ116K20SP6    
X RP1-90I23 S Xq22.1~22.3(SC)
 chrX 103Mb   sWXD2844    
X RP11-452M1 CR Xq22(FHCRC)
Xq22.2b~22.3a(NCI)
 chrX 106Mb   DXS1456 AZ301089.2 SP6,
AZ254647.2 T7		  
X RP3-347G22 S Xq22.1~22.3(SC)
 chrX 107Mb   SGC32037    
X RP1-297L21 S Xq22~23(SC)
 chrX 102Mb   stSG25728    
X RP1-320J15 S Xq22.1~23(SC)
 chrX 106Mb AC004081.1 AL035155    
X RP11-301H14 S Xq22.1~23(SC)
 chrX 106Mb   sWXD2780    
X RP11-393D6 C Xq22~23(FHCRC)
 chrX 104Mb   RH63347 AZ254496.2 SP6,
AZ254495.2 T7		  
X RP11-453F21 C Xq22~23(FHCRC)
 chrX 106Mb   DXS7891 AQ586069.1 SP6  
X RP11-541I12 CS Xq22.1~22.3(SC)
Xq22~23(FHCRC)
 chrX 103Mb AL121868.11 DXS1460    
X RP13-383K5 S Xq22.1~24(SC)
 chrX 106Mb AL390039.10 stbA92F23T7    
X RP11-572H24 R Xq22.2a(NCI)
 chrX 103Mb   DXS1460 AZ254683.2 T7,
AZ254684.2 SP6		  
X RP11-439C23 S Xq22.2~23(SC)
 chrX 106Mb   sWXD2780    
X RP11-18N2 CS Xq22.3~24(SC)
Xq23(FHCRC)
 chrX 114Mb   DXS7347, SHGC-16304    
X RP11-484G12 S Xq22.3~24(SC)
 chrX 113Mb   stSG44004 AQ630572.1 T7,
AQ630570.1 SP6		  
X RP13-304D22 S Xq22.3~24(SC)
 chrX 114Mb   DXS6794    
X RP11-513O15 CR Xq22.3c(NCI)
Xq23(FHCRC)
 chrX 110Mb   DXS7357 AZ254657.2 T7,
AZ254658.2 SP6		  
X RP1-110J4 S Xq23(SC)
 chrX 111Mb   stSG49019    
X RP1-179M15 S Xq23(SC)
 chrX 113Mb   stSG49022    
X RP1-290B4 S Xq23(SC)
 chrX 113Mb AC003014.1 stSG49022    
X RP1-93I3 S Xq23(SC)
 chrX 114Mb AC003983.1 stSG45831    
X RP11-224D23 C Xq23(FHCRC)
 chrX 110Mb   SHGC-16527    
X RP11-491C15 CR Xq23(FHCRC)
Xq23d~23e(NCI)
 chrX 116Mb   DXS7319 AZ303300.2 SP6,
AZ303299.2 T7		  
X RP11-528G12 CR Xq23(FHCRC)
Xq23c(NCI)
 chrX 114Mb   DXS8297*u AZ303229.2 T7,
AZ303230.2 SP6		  
X RP11-79N19 C Xq23(FHCRC)
 chrX 110Mb   SHGC-9199 AQ285093.1 SP6,
AQ285111.1 T7		  
X RP11-80K1 C Xq23(FHCRC)
 chrX 105Mb   SHGC-33056 AZ520749.1 T7,
AQ281249.1 SP6		  
X RP11-561J7 CR Xq23(FHCRC)
Xq24c(NCI)
 chrX 117Mb   DXS7274 AZ254675.2 SP6,
AZ254674.2 T7		  
X RP1-164D5 S Xq23~24(SC)
 chrX 113Mb AC004998.2 stSG49020    
X RP1-170D19 S Xq23~24(SC)
 chrX 113Mb AC004822.1 stSG20776    
X RP1-241P17 S Xq23~24(SC)
 chrX 114Mb AC005000.2 stSG38531    
X RP1-278D1 S Xq23~24(SC)
 chrX 116Mb AC006963.4 stSG54633    
X RP1-296G17 S Xq23~24(SC)
 chrX 119Mb AC006144.1 sWXD3138    
X RP1-29I24 S Xq23~24(SC)
 chrX 113Mb AC007022.2 stdJ788M24T7    
X RP1-314H24 S Xq23~24(SC)
 chrX 120Mb AC006314.2 stSG24598    
X RP1-73F11 S Xq23~24(SC)
 chrX 113Mb AC000055.1 DXS8088    
X RP1-74M20 S Xq23~24(SC)
 chrX 120Mb AC006143.1 stSG24598    
X RP11-138G10 S Xq23~24(SC)
 chrX 113Mb   stSG44004 AQ383790.1 T7,
AQ383787.1 SP6		  
X RP11-197B12 S Xq23~24(SC)
 chrX 117Mb AL391358.14 stSG55083    
X RP11-331F17 CR Xq23~24(FHCRC)
Xq23e~24a(NCI)
 chrX 116Mb   DXS7918 AZ254446.1*u T7,
AZ254447.1*u SP6		  
X RP3-327A19 S Xq23~24(SC)
 chrX 118Mb AC002477.1 stSG25727    
X RP3-368G6 S Xq23~24(SC)
 chrX 120Mb AC007074.2 stSG44008    
X RP3-394H4 S Xq23~24(SC)
 chrX 116Mb AC006395.1 stSG36125    
X RP3-397N10 S Xq23~24(SC)
 chrX 114Mb   stSG51496    
X RP3-400D10 S Xq23~24(SC)
 chrX 109Mb   stSG55092    
X RP3-402K21 S Xq23~24(SC)
 chrX 112Mb   stSG49023    
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
X RP3-409G10 S Xq23~24(SC)
 chrX 114Mb   stSG38531    
X RP3-470B3 S Xq23~24(SC)
 chrX 111Mb   stSG55084    
X RP3-474E24 S Xq23~24(SC)
 chrX 114Mb   stSG38531    
X RP3-502A17 S Xq23~24(SC)
 chrX 117Mb   stSG24592    
X RP4-555N2 S Xq23~24(SC)
 chrX 118Mb AC004835.2 sWXD2181    
X RP4-564D24 S Xq23~24(SC)
 chrX 116Mb AC073306.2 stSG20780*u    
X RP4-673N16 S Xq23~24(SC)
 chrX 113Mb AC007025.2 stSG50080    
X RP4-736G20 S Xq23~24(SC)
 chrX 114Mb AL445164.14 NIB1759    
X RP5-1015P16 S Xq23~24(SC)
 chrX 120Mb AC006018.2,
AC007486.1,
AC093545.1		 stSG50082    
X RP5-1098A23 S Xq23~24(SC)
 chrX 116Mb AC004959.1 stSG20786    
X RP6-172A13 S Xq23~24(SC)
 chrX 116Mb   stSG20787    
X RP6-194K9 S Xq23~24(SC)
 chrX 117Mb AC083896.2 stSG24592    
X RP6-52J4 S Xq23~24(SC)
 chrX 119Mb AC006962.2 stSG34617    
X RP1-321E8 S Xq23~25(SC)
 chrX 119Mb AC008162.3 stSG45901    
X RP11-339D17 S Xq23~25(SC)
 chrX 117Mb   stSG55082    
X RP11-573J16 S Xq23~25(SC)
 chrX 117Mb   stbA483G10SP6A    
X RP11-65B15 S Xq23~25(SC)
 chrX 116Mb   stbA304N7SP6*u AQ241224.1 SP6,
AQ202927.1 		 
X RP13-125M24 S Xq23~25(SC)
 chrX 117Mb AL391237.12 stbA573J16SP6    
X RP3-409F10 S Xq23~25(SC)
 chrX 116Mb AC008059.2 DXS7863    
X RP3-429C12 S Xq23~25(SC)
 chrX 120Mb   stSG11426    
X RP4-562J12 S Xq23~25(SC)
 chrX 117Mb AC006965.3 DXS7274    
X RP4-649M7 S Xq23~25(SC)
 chrX 116Mb AC006968.2 stSG54634    
X RP4-655L22 S Xq23~25(SC)
 chrX 119Mb AC011890.4 stSG45901    
X RP5-1026B21 S Xq23~25(SC)
 chrX 116Mb AC006975.2 WI-8811*d   multiple_placements_on_genome
X RP5-1026B21 S Xq23~25(SC)
 chrX 48Mb AC006975.2*d WI-8811   multiple_placements_on_genome
X RP6-155F9 S Xq23~25(SC)
 chrX 117Mb AC007021.3 stSG55096    
X RP6-39H21 S Xq23~25(SC)
 chrX 117Mb AC007088.3 stSG38526    
X RP1-116L16 S Xq24(SC)
 chrX 120Mb   stSG38524    
X RP1-141F21 S Xq24(SC)
 chrX 116Mb   sWXD3117    
X RP1-169K13 S Xq24(SC)
 chrX 117Mb AC003012.1 stSG38526    
X RP1-170A2 S Xq24(SC)
 chrX 117Mb   stSG38526    
X RP1-172A13 S Xq24(SC)
 chrX 116Mb AC004823.1 stSG20768    
X RP1-222H5 S Xq24(SC)
 chrX 120Mb AC002377.1 DXS7597    
X RP1-236C11 S Xq24(SC)
 chrX 119Mb   stSG2986    
X RP1-237N6 S Xq24(SC)
 chrX 120Mb   stSG38523    
X RP1-237P6 S Xq24(SC)
 chrX 120Mb   stSG38523    
X RP1-23F21 S Xq24(SC)
 chrX 111Mb   AFMA275ZC9    
X RP1-245M12 S Xq24(SC)
 chrX 109Mb   sWXD1198    
X RP1-269O5 S Xq24(SC)
 chrX 110Mb AC005191.1 stdJ288I1SP6    
X RP1-281C6 S Xq24(SC)
 chrX 118Mb   stSG50088    
X RP1-2C6 S Xq24(SC)
 chrX 116Mb AC002071.1 stSG20780*u    
X RP1-302C5 S Xq24(SC)
 chrX 109Mb AC000113.1 sWXD1198    
X RP1-313K13 S Xq24(SC)
 chrX 116Mb   sWXD3117    
X RP1-318C15 S Xq24(SC)
 chrX 119Mb AC002476.1 stSG2986    
X RP1-44L15 S Xq24(SC)
 chrX 111Mb AC004827.1 WI-13613    
X RP1-57I15 S Xq24(SC)
 chrX 122Mb   stSG24604    
X RP1-64C11 S Xq24(SC)
 chrX 119Mb   stSG25724    
X RP1-77N5 S Xq24(SC)
 chrX 119Mb   stSG2986    
X RP1-99A5 S Xq24(SC)
 chrX 119Mb   DXS1001    
X RP3-336F19 S Xq24(SC)
 chrX 116Mb   stSG20786    
X RP3-353N18 S Xq24(SC)
 chrX 118Mb   stSG25727    
X RP3-364D2 S Xq24(SC)
 chrX 111Mb   stSG24595    
X RP3-370D8 S Xq24(SC)
 chrX 122Mb   stSG24603    
X RP3-376J14 S Xq24(SC)
 chrX 118Mb   stSG45809    
X RP3-378G18 S Xq24(SC)
 chrX 120Mb   stSG24598    
X RP3-378P9 S Xq24(SC)
 chrX 116Mb AC005002.2 AFMC013WD5    
X RP3-387K21 S Xq24(SC)
 chrX 122Mb   DXS8059    
X RP3-396A11 S Xq24(SC)
 chrX 119Mb   stSG2986    
X RP3-404F18 S Xq24(SC)
 chrX 118Mb AC004000.1 stSG50088    
X RP3-431C13 S Xq24(SC)
 chrX 109Mb   sWXD1198    
X RP3-435I6 S Xq24(SC)
 chrX 113Mb   stSG20795    
X RP3-488L15 S Xq24(SC)
 chrX 122Mb   AFM280VF5    
X RP3-491A6 S Xq24(SC)
 chrX 120Mb   stSG38523    
X RP3-491K3 S Xq24(SC)
 chrX 114Mb   stSG51496    
X RP3-510F15 S Xq24(SC)
 chrX 118Mb   stSG45809    
X RP5-1057B19 S Xq24(SC)
 chrX 117Mb   DXS7286    
X RP1-117L12 S Xq24~25(SC)
 chrX 122Mb   AFM280VF5    
X RP1-153N1 S Xq24~25(SC)
       DXS6791*u    
X RP1-192M20 S Xq24~25(SC)
 chrX 120Mb   stSG24598    
X RP1-25G7 S Xq24~25(SC)
 chrX 122Mb   stSG24603    
X RP1-26J8 S Xq24~25(SC)
 chrX 122Mb   stSG55095    
X RP1-31C3 S Xq24~25(SC)
 chrX 122Mb   AFM280VF5    
X RP11-423F7 CR Xq24~25(FHCRC)
Xq24e~25a(NCI)
 chrX 119Mb   stSG2986 AZ254507.2 T7,
AZ254508.2 SP6,
AQ549465.1 SP6		  
X RP11-566B18 S Xq24~25(SC)
 chrX 120Mb AL732591.4 stSG44008    
X RP11-63E7 C Xq24~25(FHCRC)
 chrX 122Mb   AFM280VF5 AQ196250.1 ,
AQ196247.1 		 
X RP3-387M6 S Xq24~25(SC)
 chrX 120Mb   stSG11426    
X RP3-399P19 S Xq24~25(SC)
 chrX 120Mb   sWXD400    
X RP3-525N14 S Xq24~25(SC)
 chrX 119Mb AC002086.1 stSG36134    
X RP4-755D9 S Xq24~25(SC)
 chrX 119Mb AC006147.2 DXS7277    
X RP6-173I14 S Xq24~25(SC)
 chrX 123Mb AL589793.1 DXS7144    
X RP6-30G15 S Xq24~25(SC)
 chrX 126Mb AL589785.1 DXS8044    
X RP11-238K20 S Xq24~26.2(SC)
 chrX 125Mb AC026652.2 stFSX1057    
X RP11-531P11 R Xq25a(NCI)
 chrX 120Mb   DXS7316 AZ254665.2 T7,
AZ254666.2 SP6		  
X RP11-526E6 R Xq25a~25b(NCI)
 chrX 122Mb   DXS7322 AZ254663.2 T7,
AZ254664.2 SP6		  
X CTD-2115P10 C Xq25(FHCRC)
       Hs.89525*u    
X RP1-27C23 S Xq25(SC)
 chrX 122Mb   stSG24603    
X RP1-317F20 S Xq25(SC)
 chrX 127Mb   stFSX97    
X RP11-22C20 C Xq25(FHCRC)
 chrX 120Mb   SHGC-194*u AQ009028.1 SP6,
B86146.1 SP6,
B86147.1 T7		  
X RP11-325K14 CR Xq25(FHCRC)
Xq25c(NCI)
 chrX 122Mb   DXS7906 AQ536948.1 T7,
AZ254440.1*u T7,
AZ254441.1*u SP6		  
X RP11-511E23 C Xq25(FHCRC)
 chrX 120Mb   DXS7316    
X RP11-96G7 C Xq25(FHCRC)
 chrX 126Mb   SHGC-9476 AQ317627.1 T7,
AQ317624.1*u SP6		  
X RP3-382L17 S Xq25(SC)
 chrX 122Mb   AFM280VF5    
X RP3-443J15 S Xq25(SC)
       DXS7897*u    
X RP6-1M13 S Xq25(SC)
 chrX 123Mb   stSG26602    
X RP6-64M13 S Xq25(SC)
 chrX 122Mb   stSG20774    
X RP11-307J14 C Xq25~26(FHCRC)
 chrX 128Mb   DXS7865    
X RP11-357N12 CR Xq25~26(FHCRC)
Xq26.3b(NCI)
 chrX 133Mb   DXS7503 AQ553839.1 T7,
AZ519469.1 SP6,
AZ254466.1*u T7		  
X RP11-486A7 CR Xq25~26(FHCRC)
Xq26.2a(NCI)
 chrX 130Mb   DXS7278, sWXD1781*u AZ303223.2 T7,
AZ303224.2 SP6		  
X RP11-65I1 C Xq25~26(FHCRC)
 chrX 130Mb   SHGC-33938    
X RP6-52J6 S Xq25~26(SC)
 chrX 122Mb   stSG20774    
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
X RP11-488B15 R Xq25f(NCI)
 chrX 124Mb   RH63424 AZ303218.2 SP6,
AZ303217.2 T7		  
X RP11-383B16 R Xq25h~26.1a(NCI)
 chrX 127Mb   DXS7359 AZ254492.2 SP6,
AQ550758.1 SP6,
AQ550761.1 T7,
AZ254491.2 T7		  
X RP11-348J1 R Xq26.1a~26.1b(NCI)
 chrX 128Mb   DXS7865 AZ254460.1*u T7,
AZ254461.1*u SP6		  
X CTB-40O12 R Xq26(CSMC)
 chrX 133Mb   AFMA342ZF5    
X CTB-40O13 R Xq26(CSMC)
 chrX 133Mb   AFMA342ZF5    
X CTB-40P13 R Xq26(CSMC)
 chrX 133Mb   AFMA342ZF5    
X CTB-9C23 R Xq26(CSMC)
 chrX 136Mb   AFMA046WB9    
X RP1-228J8 S Xq26(SC)
 chrX 131Mb   stSG20992    
X RP1-93B6 S Xq26(SC)
 chrX 131Mb   stSG20992    
X RP11-155A5 C Xq26(FHCRC)
 chrX 130Mb   SHGC-13669 AZ516088.1 T7  
X RP11-267D20 C Xq26(FHCRC)
 chrX 135Mb   SHGC-31764    
X RP11-34J1 C Xq26(FHCRC)
 chrX 135Mb   SHGC-31168 AQ046442.1 ,
AQ046443.1 		 
X RP11-478P11 C Xq26(FHCRC)
 chrX 136Mb   DXS1319 AZ254488.2 SP6,
AQ635738.1 SP6,
AQ635746.1 T7,
AZ254487.2 T7		  
X RP11-97N5 C Xq26(FHCRC)
 chrX 134Mb AL953870.2 SHGC-31813 AQ319483.1 T7,
AQ319481.1 SP6		  
X RP3-481H9 S Xq26(SC)
 chrX 73Mb   SHGC-32393    
X RP11-503I20 CR Xq26(FHCRC)
Xq26.3d~27.1a(NCI)
 chrX 136Mb   DXS7291 AZ303212.2 SP6,
AZ303211.2 T7		  
X RP11-179G19 S Xq26.1~27.1(SC)
 chrX 131Mb AL390249.10 stFSX283*u    
X CTB-10L13 R Xq26~27(CSMC)
 chrX 136Mb   AFMA046WB9    
X RP11-112H23 C Xq26~27(FHCRC)
 chrX 136Mb   SHGC-1488 AQ313077.1 SP6,
AQ343294.1 T7		  
X RP11-533L19 CR Xq26~27(FHCRC)
Xq27.2a(NCI)
 chrX 140Mb   DXS8232 AZ303296.2 SP6,
AZ303295.2 T7		  
X RP11-508C21 R Xq26.2a~26.2b(NCI)
 chrX 130Mb   DXS7278, RH63767*u, sWXD1781*u AZ303214.2 SP6,
AZ303213.3 T7		  
X RP5-1091A21 S Xq26.2~27.2(SC)
 chrX 138Mb   stSG52872    
X RP11-513O11 R Xq26.2b(NCI)
 chrX 132Mb   RH16248 AZ303293.2 T7,
AZ303294.2 SP6		  
X RP13-173E14 S Xq26.3~27.2(SC)
 chrX 138Mb   stdJ41P24T7    
X GS1-213J20 S Xq26.3~27.3(SC)
       stFSX1593*u    
X RP4-569K23 S Xq26.3~27.3(SC)
       sWXD848*u    
X RP1-81J2 S Xq27(SC)
 chrX 136Mb   stSG20553    
X RP11-269F10 S Xq27.1~27.3(SC)
 chrX 144Mb AL445258.4 stFSX1628    
X RP11-298A8 S Xq27.1~27.3(SC)
 chrX 139Mb AL451048.13 DXS1341    
X RP11-35M23 S Xq27.1~27.3(SC)
 chrX 144Mb   DXS7401    
X RP11-388L20 C Xq27(FHCRC)
 chrX 140Mb   DXS7410 AZ254689.1*u T7,
AZ254690.1*u SP6		  
X RP11-489K19 CR Xq27(FHCRC)
Xq27.3d~27.3e(NCI)
 chrX 146Mb   DXS7378 AZ303209.2 T7,
AQ633285.1 T7,
AQ633283.1 SP6,
AZ303210.2 SP6		  
X RP11-494A15 S Xq27.1~27.3(SC)
 chrX 139Mb   stdJ595A18t7    
X RP11-503O6 CR Xq27(FHCRC)
Xq27.3c(NCI)
 chrX 144Mb   DXS7386 AZ303216.2 SP6,
AZ303215.2 T7		  
X RP11-513H18 CR Xq27(FHCRC)
Xq27.3b~27.3c(NCI)
 chrX 142Mb   DXS7381 AZ303298.2 SP6,
AZ303297.2 T7		  
X RP13-175H18 S Xq27.1~27.3(SC)
       stFSX1593*u    
X RP13-188P16 S Xq27.1~27.3(SC)
 chrX 139Mb   stFSX2297    
X RP13-34G21 S Xq27.1~27.3(SC)
 chrX 138Mb AL442633.4 stFSX210*u    
X RP13-99O6 S Xq27.1~27.3(SC)
 chrX 139Mb   stFSX2297    
X RP1-52F3 S Xq27.1~28(SC)
 chrX 146Mb   GDB:185344    
X RP11-130N6 C Xq27~28(FHCRC)
 chrX 148Mb   AFM199WC7, AFM199WC7*u    
X RP11-142M16 C Xq27~28(FHCRC)
 chrX 148Mb   SHGC-35882, 18045*u AQ385857.1 T7  
X RP11-221G13 C Xq27~28(FHCRC)
 chrX 149Mb   SHGC-13668    
X RP11-357B12 S Xq27.1~28(SC)
 chrX 144Mb   sts-H42415*d AQ552854.1 T7 multiple_placements_on_genome
X RP11-357B12 S Xq27.1~28(SC)
 chrX 56Mb   sts-H42415 AQ552854.1*d T7 multiple_placements_on_genome
X RP11-383P16 C Xq27~28(FHCRC)
 chrX 127Mb   RH76118*u AZ301099.2 SP6,
AZ301098.2 T7		  
X RP11-406D14 CR Xq27.3c~27.3d(NCI)
Xq27~28(FHCRC)
 chrX 145Mb   sWXD1447 AZ254499.2 T7,
AZ254500.2*u SP6		  
X RP11-514L15 S Xq27.1~28(SC)
 chrX 142Mb AL135920.12 DXS7381    
X GS1-77P9 S Xq27.2~28(SC)
 chrX 145Mb   stFSX729    
X RP11-356G18 R Xq27.3a(NCI)
 chrX 141Mb   DXS7409 AQ535824.1 T7,
AQ535823.1 SP6,
AZ254464.1*u T7,
AZ254465.1*u SP6		  
X CTB-8E16 R Xq28(CSMC)
 chrX 149Mb   AFMB334XH9    
X RP11-314B3 C Xq28(FHCRC)
 chrX 152Mb   DXS7418    
X RP11-337E5 CR Xq28(FHCRC)
Xq28b~28c(NCI)
 chrX 150Mb   DXS7076 AZ254452.1*u T7,
AZ254453.1*u SP6		  
X RP11-405N23 CR Xq28(FHCRC)
Xq28f(NCI)
 chrX 154Mb   DXS7060*u AZ301102.2 T7,
AZ301103.2 SP6		  
X RP13-91D16 S Xq28(SC)
 chrX 26Mb   stFSX1103    
total351C:118 R:80 S:204351342 102351132 

1 Distributor: C, Children's hospical Oakland research institute; R, Research Genetics; S, Sanger Center

2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.

4 Sequence-tag

  *d indicates sequences that disagree with placement on the genome.

  *u indicates seqeunces that didn't align to the genome or were not used for annotation because the clone was placed to multiple locations on the human genome.