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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones |
| Chr | clone name | Distributor1 | FISH | Placement on genome2 | Placement summary3 | Insert sequence4 | STS4 | BAC-ends4 | Flag |
| Y | RP11-414C23 |   |
Yp11.3(FHCRC) |
chrY 2Mb |      |
AC006157.2 | DYS252 | AZ303265.2 SP6, AQ552747.1 SP6, AZ515687.2 T7 | |
| Y | RP11-115H13 |  |
Yp11.2(FHCRC) Yp11.31b~11.31a(NCI) |
chrY 6Mb |   |
AC011297.3 | DYS266 | AQ346422.1 T7, AQ346419.1 SP6 | |
| Y | RP11-375P13 | |
Yp11.2j~11.2h(NCI) |
chrY 8Mb |  |
AC064829.6 | CL423246.1 SP6, CL423248.1 T7, AQ533959.1 T7 | ||
| Y | RP11-91N9 | |
Yq11.21(FHCRC) |
chrY 12Mb |  |
AQ284202.1 SP6, AQ284203.1 T7 | |||
| Y | RP11-91P9 | |
Yq11.21(FHCRC) |
chr6 26Mb | |
AZ519364.1 T7, AQ284268.1 T7, AQ284266.1 SP6 | |||
| Y | RP11-20H21 | |
Yq11.2(FHCRC) |
chrY 19Mb | |
DYS211 | B85663.1 T7, AQ008163.1 SP6 | ||
| Y | RP11-24F18 | |
Yq11.2(FHCRC) |
chrY 21Mb |   |
DYS224 | B86616.1 SP6 | ||
| Y | RP11-71M14 | |
Yq11.2(FHCRC) |
chrY 15Mb | |
DYS280 | AQ236898.1 SP6 | ||
| Y | RP11-91A13 | |
Yq11.2(FHCRC) |
chrY 16Mb | |
DYS197 | AQ286312.1 SP6, AQ286314.1 T7 | ||
| Y | RP11-26B12 | |
Yq11.2~12(FHCRC) |
chrY 25Mb | |
AFM161YF6*u, AFM161YF6*u | B86816.1 SP6, B86817.1 T7 | ||
| Y | RP11-135H9 | |
Yq11.22(FHCRC) |
chrY 17Mb | |
DYS200 | AQ380804.1 SP6 | ||
| Y | RP11-236J18 | |
Yq11.22(FHCRC) |
chr8 80Mb | |
DYS210*d, DYS208*d | AQ486167.1 SP6, AQ486169.1 T7 | multiple_placements_on_genome | |
| Y | RP11-236J18 | |
Yq11.22(FHCRC) |
chrY 19Mb |  |
DYS208, DYS210 | AQ486167.1*d SP6, AQ486169.1*d T7 | multiple_placements_on_genome | |
| Y | RP11-65G9 | |
Yq11.22(FHCRC) |
chrY 21Mb | |
AC007876.2 | DYS222, DYS221, DYS222*u | AQ237983.1 SP6, AQ237984.1 T7 | |
| Y | RP11-214M24 | |
Yq11.223d~11.223e(NCI) Yq11.23(FHCRC) |
chrY 25Mb | |
AC025735.4*d | CL423213.1 SP6, CL423215.1 T7 | multiple_placements_on_genome | |
| Y | RP11-214M24 | |
Yq11.223d~11.223e(NCI) Yq11.23(FHCRC) |
chrY 25Mb | |
AC025735.4 | CL423215.1 T7, CL423213.1 SP6 | multiple_placements_on_genome | |
| Y | RP11-140H23 | |
Yq11.23(FHCRC) |
chrY 25Mb | |
AC053490.2*d | DYS236*u | AQ387617.1 SP6, AQ387618.1 T7 | multiple_placements_on_genome |
| Y | RP11-140H23 | |
Yq11.23(FHCRC) |
chrY 23Mb | |
AC053490.2 | DYS236*u | AQ387617.1 SP6, AQ387618.1 T7 | multiple_placements_on_genome |
| Y | RP11-185N10 | |
Yq11.23(FHCRC) |
chrY 21Mb | |
DYS222, DYS221, DYS222*u | AQ420969.1 SP6 | ||
| Y | RP11-5C5 | |
Yq11.23(FHCRC) |
AC010080.2*u | DYS223*u | B48115.1*u T7, B63441.1*u SP6, B63442.1*u T7 | |||
| Y | RP11-80F8 | |
Yq12(FHCRC) |
chrY 57Mb | |
AQ284004.1 SP6, AQ284006.1 T7 | |||
| Y | RP11-88F4 | |
Yq12(FHCRC) |
chrY 57Mb | |
AQ286683.1 SP6, AZ516167.1 T7, AQ286686.1 T7 | |||
| total | 19 | C:17 R:3 S:0 | 19 | 18 | 7 | 13 | 19 |
1 Distributor: , Children's hospical Oakland research institute; , Research Genetics; 
, Sanger Center
2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included
3 Placement summary indicates sequences used for clone placement.
BAC-end sequence aligned in the plus orientation
BAC-end sequence aligned in the minus orientation
insert sequence
STS aligned
insert sequence has clone end information.
4 Sequence-tag
*d indicates sequences that disagree with placement on the genome.
*u indicates seqeunces that didn't align to the genome or were not used for annotation because the clone was placed to multiple locations on the human genome.