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39477 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing
GSE235540	Mapping cellular plasticity through the lens of Fra1 during KrasG12D mediated pancreatic acinar to ductal metaplasia [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BW	Anil K. Rustgi	Jun 09, 2024
GSE235542	Mapping cellular plasticity through the lens of Fra1 during KrasG12D mediated pancreatic acinar to ductal metaplasia [snATAC]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	MTX TSV	Anil K. Rustgi	Jun 09, 2024
GSE241429	Comparative single-cell multiome reveals evolutionary innovations in neural progenitor cells during primate corticogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Macaca mulatta Mus musculus	33	BED MTX TXT	Yiming Sun	Jun 09, 2024
GSE246900	TET-mediated DNA demethylation influences histone enhancers H3K4me1 and H3K27ac in breast cancer	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	NARROWPEAK	Samson Mani	Jun 09, 2024
GSE115551	Genome-wide mapping of H3K9me2 in DOT1L-deficient worms.	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	8	BEDGRAPH SRA Run Selector	Ruben Esse	Jun 07, 2024
GSE123393	Genome-wide chromatin localization profiling of transcription factor MML-1	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED BEDGRAPH TXT SRA Run Selector	Ruben Esse	Jun 07, 2024
GSE180483	PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	88	BED BW NARROWPEAK XLSX SRA Run Selector	Jacquelyn A Myers	Jun 07, 2024
GSE180486	PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BW NARROWPEAK SRA Run Selector	Jacquelyn A Myers	Jun 07, 2024
GSE180487	PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	137	BED BW NARROWPEAK	Jacquelyn A Myers	Jun 07, 2024
GSE235543	Mapping cellular plasticity through the lens of Fra1 during KrasG12D mediated pancreatic acinar to ductal metaplasia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BW MTX TSV TXT	Anil K. Rustgi	Jun 07, 2024
GSE240025	RNA-SEQ for different CD8 T cell subsets of leukemic mice before and after chemotherapy	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	92	CNT TXT	duan cai wen	Jun 07, 2024
GSE268819	Drosophila melanogaster Set8 and L(3)mbt function in gene expression independently of histone H4 lysine 20 methylation [H4K20me1_CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	27	BED BW	Robert J. Duronio	Jun 07, 2024
GSE268820	Drosophila melanogaster Set8 and L(3)mbt function in gene expression independently of histone H4 lysine 20 methylation [GFP-L3mbt_CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	8	BED BW	Robert J. Duronio	Jun 07, 2024
GSE269349	PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression[CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BW NARROWPEAK	Jacquelyn A Myers	Jun 07, 2024
GSE209715	Chromatin structure and gene expression signatures in FUS low and high expressed hematopoietic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	44	BED BW HIC TXT	Jianwei Wang	Jun 06, 2024
GSE242851	Cell fate decision by a morphogen-transcription factor-chromatin modifier axis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BED BW TXT	jin ming	Jun 06, 2024
GSE245538	A cis-regulatory module underlies retinal ganglion cell genesis and axonogenesis [Set1.Sc-ATAC-Seq retina E14.5 WT retina]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	MTX TSV	Shuchang Liu	Jun 06, 2024
GSE245543	A cis-regulatory module underlies retinal ganglion cell genesis and axonogenesis [Set5.H3K27me3 ChIP-Seq retina E14.5 WT and Atoh7 Remote enhancer KO]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW	Shuchang Liu	Jun 06, 2024
GSE245544	A cis-regulatory module underlies retinal ganglion cell genesis and axonogenesis [Set6.H3K27Ac and H3K4me2 ChIP-Seq cerebellum P18 WT]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BW	Shuchang Liu	Jun 06, 2024
GSE245549	A cis-regulatory module underlies retinal ganglion cell genesis and axonogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	48	BW MTX TAB TSV	Shuchang Liu	Jun 06, 2024