GEO Browser - GEO

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41 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL11154	Methylation profiling by high throughput sequencing	Mus musculus
GSE136578	Super cChIP-seq, a robust and universal epigenetic profiling method using 10 cells	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	32	BW SRA Run Selector	Xiaodong Zhao	Apr 07, 2024
GSE200187	Circulating cell-free, methylated DNA reveals tissue-specific, cellular damage from radiation treatment	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	87	BETA CSI PAT	Anton Wellstein	Jul 24, 2023
GSE158067	Single-cell multi-omics in human clonal hematopoiesis reveals that DNMT3A R882 mutations perturb early progenitor states through selective hypomethylation.	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	26	CSV MTX TSV TXT XLSX SRA Run Selector	Neville Dusaj	Jul 05, 2022
GSE165052	Characterization of a RAD51C-Silenced High Grade Serous Ovarian Cancer Model During PARP Inhibitor Resistance Development	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	34	IDAT	Hu Li	Jun 16, 2021
GSE144032	m6A profiling of early, adolescent, aged and Alzheimer brains	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	58	TXT XLS XLSX SRA Run Selector	Andrew Shafik	Nov 20, 2020
GSE85356	DNA methylation repels binding of hypoxia-inducible transcription factors to maintain tumour immunotolerance	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	285	BEDGRAPH COV TSV TXT	Jieyi Xiong	Jun 18, 2020
GSE112875	DNA 5-methylcytosine specific profiling with limited input	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	15	COV	Xiaolong Cui	Apr 14, 2020
GSE124822	DNA methylation disruption reshapes the hematopoietic differentiation landscape	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	540	CSV TXT SRA Run Selector	Franco Izzo	Feb 13, 2020
GSE121723	Glioblastoma epigenome profiling identifies SOX10 as a master regulator of molecular tumour subtype	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	364	BED BIGWIG BW CEL	Bernhard Radlwimmer	Nov 05, 2018
GSE78149	Stella prevents excessive de novo DNA methylation during mouse oogenesis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	83	TXT SRA Run Selector	Zhuqiang Zhang	Sep 24, 2018
GSE112554	Highly scalable generation of DNA methylation profiles in single cells	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	6	BED SRA Run Selector	Ryan M Mulqueen	Apr 12, 2018
GSE79838	Methylome analysis of colorectal cancer cell line DNA (HCT116) and colorectal cancer patient derived xenografts (PDXs) using MeDIP-seq and cfMeDIP-seq	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	24	WIG SRA Run Selector	Daniel De Carvalho	Apr 01, 2018
GSE95013	AICDA-induced epigenetic plasticity accelerates germinal center-derived lymphomagenesis	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	88	TXT SRA Run Selector	Matt Teater	Jan 19, 2018
GSE77026	Dnmt3a haploinsufficiency transforms Flt3-ITD myeloproliferative disease into a rapid, spontaneous, and fully-penetrant acute myeloid leukemia	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	44	TXT SRA Run Selector	Maria E Figueroa	Sep 01, 2017
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE96744	Epigenetic identity in AML is mostly dependent on disruption of non-promoter regulatory elements and reveals potentially antagonistic effects of mutations in epigenetic modifiers [mouse]	Methylation profiling by high throughput sequencing Third-party reanalysis	Homo sapiens Mus musculus	7	BED TXT SRA Run Selector	Jacob Lowell Glass	Apr 28, 2017
GSE86586	Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	48	TXT	Felix Krueger	Oct 10, 2016
GSE86903	Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification [Mouse and Human RNA-seq and BS-seq]	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	46	TXT SRA Run Selector	Felix Krueger	Oct 10, 2016
GSE71403	Tumor hypoxia causes DNA hypermethylation by reducing TET activity	Methylation profiling by array Methylation profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	99	IDAT	Bernard thienpont	Sep 01, 2016
GSE80105	Synergistic model of chromatin predicts Dnase-I accessibility	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	8	TAR TSV TXT SRA Run Selector	David Gifford	Jul 20, 2016