99 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE237609
Modifications in the T arm of tRNA globally determine tRNA function and cellular fitness
  • Link icon Escherichia coli
12 Ute Kothe Jun 05, 2024
GSE232539
RNA Post-transcriptional Modifications of an Early-Stage Large Subunit Ribosomal Intermediate
  • Link icon Escherichia coli
3
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Eda Kocui May 15, 2024
GSE243699
RpoS acts as a global repressor of virulence gene expression in Escherichia coli O104:H4 and enteroaggregative E. coli
  • Link icon Escherichia coli
12
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Petya Berger Apr 04, 2024
GSE253511
Anti-viral defense by an ADP-ribosyltransferase that targets mRNA to block translation (RIP-Seq in vitro)
2
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Christopher Ross Doering Mar 09, 2024
GSE253512
Anti-viral defense by an ADP-ribosyltransferase that targets mRNA to block translation (RIP-Seq in vivo)
4
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Christopher Ross Doering Mar 09, 2024
GSE253513
Anti-viral defense by an ADP-ribosyltransferase that targets mRNA to block translation (RNA-Seq)
8
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Christopher Ross Doering Mar 09, 2024
GSE225335
Enhanced genome-wide knockout screens in bacteria with CRISPR base editors
  • Link icon Escherichia coli
27
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Chase Beisel Feb 05, 2024
GSE234254
A reverse-central-dogma pathway underlies ribosome-antibiotic efficacy and accelerates resistance evolution
  • Link icon Escherichia coli
57 Tianmin Wang Dec 24, 2023
GSE196911
Improved prediction of bacterial CRISPRi guide efficiency from depletion screens through mixed-effect machine learning and data integration
  • Link icon Escherichia coli
8
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Yanying Yu Dec 19, 2023
GSE234211
A phage-encoded RNA-binding protein inhibits the antiviral activity of a toxin-antitoxin system
  • Link icon Escherichia coli
8
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Chantal K Guegler Dec 04, 2023
GSE185290
Quantitative analysis of transcription start site selection in Saccharomyces cerevisiae reveals control by DNA sequence, RNA Polymerase II activity, and NTP levels
90 Yunye Zhu Nov 26, 2023
GSE242875
Adaptive laboratory evolution of E. coli ndh gene deletion strain
  • Link icon Escherichia coli
10
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Amitesh Anand Sep 12, 2023
GSE240200
Profiling tRNA modifications in Mycobacterium tuberculosis
12
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Satoshi Kimura Aug 11, 2023
GSE235465
The global anaerobic metabolism regulator fnr is necessary for the degradation of food dyes and drugs by Escherichia coli
  • Link icon Escherichia coli
23
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Peter J Turnbaugh Aug 09, 2023
GSE150501
Reconstruction of a Pan-regulon for Fur uncovers the conservation of its transcriptional regulation in E. coli
36 Ye Gao Aug 04, 2023
GSE231935
Massively-parallel Microbial mRNA Sequencing (M3-Seq) reveals heterogenous behaviors in bacteria at single-cell resolution
4
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Bruce Wang Jul 27, 2023
GSE211073
Pairwise multiplex CRISPR/Cas9 screen of mitophagy receptors in acute myeloid leukemia
19
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Martin Wegner Jul 11, 2023
GSE202972
Generation of synthetic Acinetobacter baumannii specific nanobodies
  • Link icon Escherichia coli
3
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Bryan Davies Jun 21, 2023
GSE198120
High throughput analysis of binding of E. coli Lrp mutants
  • Link icon Escherichia coli
234 Peter Freddolino Jan 31, 2023
GSE216481
A Transcription Factor Atlas of Directed Differentiation
281 Julia Joung Jan 05, 2023