GEO Browser - GEO

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84 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16791				IDAT
GSE224850	H1FOO-DD promotes efficiency and uniformity in reprogramming to naive pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	168	BED IDAT MTX TSV TXT	Akira Kunitomi	May 01, 2024
GSE249637	Phenotypical states modulate sensitivity and transcriptional reprogramming in patient-derived glioblastoma cells in response to temozolomide and radiation therapy.	Expression profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	84	IDAT	oluwademilade Nuga	Mar 25, 2024
GSE204813	Co-expression analysis reveals gene cluster associated with methylation of enhancers and chromosomal instability under TP63 and TRIM29 regulation.	Methylation profiling by genome tiling array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	21	BW IDAT NARROWPEAK	Rinat I Sultanov	Mar 19, 2024
GSE227853	Genome scale analysis of DNA methylation patterns in prostate cancer patient derived xenograft models	Methylation profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	77	BW IDAT	Brian Hanratty	Dec 31, 2023
GSE226872	Transcriptome and DNA methylation analyses highlight the role of menstrual cycle phase in tumorigenesis of endometriosis-related ovarian carcinoma histotypes.	Methylation profiling by genome tiling array	Homo sapiens	184	IDAT	Ian Beddows	Oct 13, 2023
GSE242090	Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups	Expression profiling by high throughput sequencing Third-party reanalysis Methylation profiling by genome tiling array	Homo sapiens Mus musculus	69	IDAT MTX TAB TSV	Mamy Jean de Dieu ANDRIANTERANAGNA	Sep 20, 2023
GSE220581	Culture expansion of CAR T cells evokes aberrant DNA methylation that is associated with adverse clinical outcome	Expression profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	40	IDAT TXT	Wolfgang Wagner	Jul 20, 2023
GSE224624	A multi-omics approach unveils an association between subclinical atherosclerosis and epigenetic age acceleration mediated by systemic inflammation	Expression profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	782	IDAT	Juan Carlos Silla-Castro	Jun 21, 2023
GSE166134	Tumorigenic iPSC-NS/PCs with mesenchymal properties	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	277	IDAT	Tsukasa Sanosaka	Jun 04, 2023
GSE226961	Significant increase of high-risk chromosome 1q gain and 6q loss at recurrence in posterior fossa group A ependymoma: a multicenter study	Expression profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	291	IDAT	Andrew M Donson	May 31, 2023
GSE210277	Synthetic epigenetic reprogramming of mesenchymal to epithelial states using the CRISPR/dCas9 platform in triple negative breast cancer	Methylation profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	45	BROADPEAK BW IDAT NARROWPEAK	Joe Cursons	Apr 17, 2023
GSE212375	Multiplatform Analysis of Primary and Metastatic Breast Tumors from the AURORA US Network identifies microenvironment and epigenetics differences as drivers of metastasis	Expression profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	281	IDAT	Uma Chandran	Jan 03, 2023
GSE179476	Improved Sendai Viral System for Reprogramming to Naive Pluripotency	Methylation profiling by array Expression profiling by high throughput sequencing	Homo sapiens	26	IDAT TXT	Akira Kunitomi	Dec 15, 2022
GSE214803	Cancer-selective metabolic vulnerabilities in MYC-amplified medulloblastoma	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array Other	Homo sapiens	18	IDAT TXT	Sheila Singh	Nov 09, 2022
GSE207266	Unified rhombic lip origins of Group 3 and Group 4 medulloblastoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens Mus musculus	68	IDAT NARROWPEAK	Kyle S Smith	Sep 23, 2022
GSE139388	DNA methylation and gene expression changes during acquired resistance to ALK inhibitors	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	7	BED IDAT MTX TSV	Jong Hwan Kim	Sep 20, 2022
GSE210843	DNA methylation signatures in airway cells from adult children of asthmatic mothers reflect subtypes of severe asthma	Expression profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	260	IDAT	Carole Ober	Aug 09, 2022
GSE201754	Methylome and transcriptome profiling of giant cell arteritis monocytes reveals novel pathways involved in disease pathogenesis and molecular response to glucocorticoids	Methylation profiling by array Expression profiling by high throughput sequencing	Homo sapiens	224	IDAT	Bioinformatics Unit IPBLN-CSIC	Jun 28, 2022
GSE180404	Hematopoietic differentiation of human iPSC is hardly affected by knockouts in DNMT3A exons despite loss of de novo DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	32	IDAT	Wolfgang Wagner	May 31, 2022
GSE163331	GATA6 is predicted to regulate DNA methylation in an in vitro model of human hepatocyte differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by array	Homo sapiens	68	BED IDAT	Takahiro Suzuki	May 04, 2022