GEO Accession viewer

GSE227794	ETVs dictate hPSC differentiation by tuning biophysical properties
GSE229357	Effect of treatment with 5uM of the type I PRMT inhibitor MS023 dissolved in DMSO for 3 days and of a stably transduced PRMT1 specific dox-inducible knockdown over 4 days in ccRCC cell line models RCC243 and 786-0
GSE230939	Effect of NUTF2 overexpression on gene expression in MCF-7 cells
GSE232939	LINE1 and PRC2 control nucleolar organization and repression of the 8C-state in human ESCs
GSE233638	Discovery of Competent Chromatin Regions in Human Embryonic Stem Cells
GSE233655	Absolute transcription-start nucleotide m6Am stoichiometry quantification by CROWN-Seq
GSE235493	Gene expression profile at single cell level from rhesus macaque fetal brain prefrontal cortex and human organotypic dlPFC slices.
GSE241585	Retinoic acid and ascorbate synergize to suppress myeloid leukemia via TET2 activation
GSE243765	Mechanoresponsive genomic enhancers potentiate the cellular response to matrix stiffness
GSE243824	Mechanism for controlled assembly of transcriptional condensates by Aire [ChIP-seq]
GSE243825	Mechanism for controlled assembly of transcriptional condensates by Aire
GSE248111	RNA Sequencing of Human iPSC-Derived Hepatocyte Organoids (iHOs)
GSE251892	Single-cell RNA-seq study of ascending somatosensory assembloids and human primary DRG
GSE255108	Targeting CDK7 function in the RNA Polymerase II transcription cycle in inflammatory arthritis
GSE255677	Reutilization of ancestral gill regulatory programs in outer ear evolution (human)
GSE260926	scMultiome-seq and single-cell spatial HD data for the developing human knee
GSE261050	Transcriptome study of Alzheimer's disease on post-mortem human brain
GSE261432	The impact of PCR duplication on RNAseq data generated using NovaSeq 6000, NovaSeq X, AVITI and G4 sequencers
GSE262329	A human-specific regulatory mechanism revealed in a preimplantation model
GSE262442	Scaled and efficient derivation of loss-of-function alleles in risk genes for neurodevelopmental and psychiatric disorders in human iPSCs
GSE263271	Human iPS cell-derived respiratory organoids as a model for respiratory syncytial virus infection
GSE263289	LINE1 and PRC2 control nucleolar organization and repression of the 8C-state in human ESCs [ChIRP-seq,RSeT+DT H9]
GSE263650	Primitive macrophages enable long-term vascularization of human heart-on-a-chip platforms
GSE263862	The enhancer RNA, AANCR, regulates APOE expression in astrocytes and microglia
GSE264208	Modifications of microbiome-derived cell-free RNA in plasma discriminates colorectal cancer samples
GSE264740	Enhancing Transcriptome Mapping with Rapid PRO-seq Profiling of Nascent RNA
GSE266575	Nuclear functions of CFAP20 in transcription and replication
GSE266680	Architecture of the neutrophil compartment in mice
GSE267283	miRNA-1229-5p promotes the migration and invasion of endometrial cells by regulating STMN1/EMT in ovarian endometriosis
GSE267465	Phagocyte-Associated Pathobionts in Crohn's Disease
GSE267525	Mechanism for controlled assembly of transcriptional condensates by Aire [ATAC-seq]
GSE267530	Inflammatory mediators suppress FGFR2 expression in human keratinocytes to promote skin inflammation
GSE267825	Assessing the impact of GXYLT2 knockdown on the expression levels of genes associated with malignant characteristics, including proliferation, invasion, and stemness, in HGC-27 gastric cancer cells.
GSE267956	Novel mechanisms of MITF regulation identified in a mouse suppressor screen
GSE268609	A roadmap to human hippocampal neurogenesis in adulthood, aging and AD
GSE268627	A comparison of methylome data produced with tPBAT and sPBAT library preparation protocols.
GSE268671	KRAS mutants confer platinum resistance by regulating ALKBH5 posttranslational modifications in lung cancer
GSE268871	Small Molecule-Catalyzed Deamination: Applications in Transcriptome-Wide Profiling of N6-Methyladenosine in RNA (human)
GSE269285	Macrophages show unprecedented anti-HIV activity in HIV-infected iHMD-NSG mice
GSE269418	Effect of the sGC activator BAY 60-2770 on human proximal tubular (HK-2) cells under hypoxia and after TGF-β1 treatment
GSE269485	Transcriptomics-informed pharmacology identifies epigenetic and cell cycle regulators as enhancers of AAV production
GSE269948	Defective RNA processing and ELOA-mediated transcriptional elongation in reversible cellular senescence suggest aging by transcription
GSE270033	DNA 5-methylcytosine regulates genome-wide formation of G-quadruplex structures [ATAC-seq]
GSE270034	DNA 5-methylcytosine regulates genome-wide formation of G-quadruplex structures [WGBS]
GSE270035	DNA 5-methylcytosine regulates genome-wide formation of G-quadruplex structures [CUT&Tag]
GSE270275	Structure-guided development of high-performance antibodies targeting site-specific post-translational modifications
GSE270327	Splicing factor U2AF2 promotes inclusion of exons with poor nucleosome phasing
GSE270463	Molecular basis for human respiratory syncytial virus transcriptional regulator NS1 interactions with MED25
GSE270504	Epigenetic heterogeneity and state-specific transcriptional programs determine differential drug response in osteosarcoma [snRNAseq + snATACseq]
GSE270506	Epigenetic heterogeneity and state-specific transcriptional programs determine differential drug response in osteosarcoma.
GSE270564	RNA sequencing in 22RV1 cells stably expressing shLuc, shIMPA1, shIMPDH2
GSE270565	Characterization of gene profile between ALDH high LNCaP cells and ALDH low LNCaP cells
GSE270624	Dietary 3-Aminobenzoic Acid Enhances Intestinal Barrier Integrity and Attenuates Experimental Colitis
GSE270784	ZIC2 and ZIC3 promote SWI/SNF recruitment to safeguard progression towards human primed pluripotency [ChIP-seq]
GSE270787	ZIC2 and ZIC3 promote SWI/SNF recruitment to safeguard progression towards human primed pluripotency
GSE270822	ZIC2 and ZIC3 promote SWI/SNF recruitment to safeguard progression towards human primed pluripotency [CUT&Tag]
GSE270948	ZIC2 and ZIC3 promote SWI/SNF recruitment to safeguard progression towards human primed pluripotency [ATAC-Seq]
GSE271090	Centralized control of dynamic gene regulatory circuits governs human T cell rest and activation
GSE271390	Cell-free transcriptome of Barrett’s Esophagus and Esophageal Cancer [Illumina - short read]
GSE271459	Transcription factor network dynamics during the commitment to oncogene-induced senescence [ATAC-Seq]
GSE271460	Transcription factor network dynamics during the commitment to oncogene-induced senescence [CUT&Tag]
GSE271461	Transcription factor network dynamics during the commitment to oncogene-induced senescence [RNA-Seq]
GSE271723	Oncostatin M induces epigenetic reprogramming in renal cell carcinoma-associated endothelial cells
GSE271789	Single-Cell Analysis Reveals Novel Immune Perturbations in Fibrotic Hypersensitivity Pneumonitis
GSE271854	AKAP95 condensates regulate transcription and can be targeted in MLL-fusion driven oncogenesis (ChIP-Seq)
GSE271855	AKAP95 condensates regulate transcription and can be targeted in MLL-fusion driven oncogenesis (CLIP-Seq)
GSE271857	AKAP95 condensates regulate transcription and can be targeted in MLL-fusion driven oncogenesis (RNA-Seq)
GSE271858	AKAP95 condensates regulate transcription and can be targeted in MLL-fusion driven oncogenesis
GSE271989	Hemoglobin-induced Transcriptomic Changes in Human Cerebral Arteries
GSE272082	Single-nucleus multiomics reveals the regulatory programs in three brain regions of sporadic early-onset Alzheimer's Disease
GSE272101	Investigating the Impact of adriamycin resistance on Gene Expression in MDA-MB-231 Breast Cancer Cells
GSE272103	Investigating the Impact of Genetic MSN Depletion on Gene Expression in MDA-MB-231 Breast Cancer Cells
GSE272312	Effect of abemaiclicb and deletion of TP53 on gene expression in MCF7 cells at different timepoints
GSE272385	Natural and non-natural cytokine receptors generate diverse cell states to enhance T cell therapy
GSE272695	Decidual natural killer cells promote extravillus trophoblast developmental pathways: evidence from trophoblast organoid co-cultures
GSE272812	Neuronal DNA repair reveals strategies to influence CRISPR editing outcomes
GSE272859	Hypoxia promotes airway differentiation in the human lung epithelium [DamID-seq]
GSE272873	IGF2BP1 phosphorylation regulates ribonucleoprotein condensate formation by impairing low-affinity protein and RNA interactions (RIP-Seq)
GSE272874	IGF2BP1 phosphorylation regulates ribonucleoprotein condensate formation by impairing low-affinity protein and RNA interactions (RNA-Seq)
GSE272875	IGF2BP1 phosphorylation regulates ribonucleoprotein condensate formation by impairing low-affinity protein and RNA interactions
GSE273226	An alternative transcription factor isoform controls AML chemoresistance [Cut&Run]
GSE273233	Retinoic acid and ascorbate synergize to suppress myeloid leukemia via TET2 activation [U-937 5hmC-seq]
GSE273253	Long non-coding RNA TUG1 regulates multiple glycolytic enzymes in hepatocellular carcinoma cells via sponging microRNA-122-5p
GSE273397	Single-cell RNA-seq of the human tonsil and blood lymphocytes
GSE273417	SIRT2 is a regulator of the differentiation block driven by SMARCB1 loss in ATRT. [RNA-Seq]
GSE273418	SIRT2 is a regulator of the differentiation block driven by SMARCB1 loss in ATRT. [CUT&Run]
GSE273419	CyroSCAPE: Scalable Immune Profiling Using Cryopreserved Whole Blood for Multi-omic Single Cell and Functional Assays
GSE273455	SIRT2 is a regulator of the differentiation block driven by SMARCB1 loss in ATRT.
GSE273692	Polo-like kinase inhibitors increase AAV production by halting cell cycle progression
GSE273887	Deciphering the functional impact of Alzheimer’s Disease-associated variants in resting and proinflammatory immune cells [MPRA]
GSE274083	Early-life thymectomy leads to an increase of granzyme-producing γδ T cells in children with congenital heart disease
GSE274466	Activation of STAT3-mediated ciliated cell survival protects against severe infection by respiratory syncytial virus
GSE274723	Combinatorial BMP4 and Activin direct choice between alternate routes to endoderm during human gastrulation.
GSE274751	Method of moments approach for generalized differential gene expression analysis (Perturb-seq)
GSE274986	Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration [scMultiome]
GSE275042	3D genome architecture in MCF10A cells in repsonse to DNA damage and ER stress
GSE275067	Deep longitudinal immune profiling reveals reprogramming of memory T cells that links to B cell dysregulation with age.
GSE275071	Single cell RNAseq analysis of PBMCs isolated from healthy adults subjeccted to sleep restriction
GSE275159	Classification of pediatric soft and bone sarcomas using DNA methylation-based profiling
GSE275677	RUNX2 as a novel Biomarker for early identification of Patients Progressing to Advanced-Stage Mycosis Fungoides
GSE275778	AR coactivators, CBP/p300, are critical mediators of DNA repair in prostate cancer [RNA-seq: 22RV1]
GSE275856	Optogenetic-Programmable Human Embryo Models Elucidate the Interplay Between Tissue Architecture and BMP4 Signaling at the Onset of Gastrulation
GSE276055	CRISPRi with barcoded expression reporters dissects regulatory networks in human cells
GSE276066	Targeting the 3D genome by anthracyclines for chemotherapeutic effects
GSE276283	A functional subpopulation of human glioma associated macrophages linked to malignant glioma progression [mtscATAC-seq]
GSE276320	Chromodomain protein CDYL confers forebrain identity to human cortical organoids by inhibiting neuronatin [RNA-seq]
GSE276596	Attempts to create transgenic mice carrying the Q3925E mutation in RyR2 Ca2+ binding site
GSE276684	Deciphering shared molecular dysregulation across Parkinson's Disease variants using a multi-modal network-based data integration and analysis
GSE276786	Toxoplasma gondii dictates placental trophoblast lineage specification through induction of decidual signaling cues [single nuclei multiome]
GSE276934	Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Visium]
GSE276945	Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis
GSE276947	Massively parallel reporter assay investigates shared genetic variants of eight psychiatric disorders
GSE277216	Role of the SAF-A SAP domain in X inactivation, transcription, splicing, and cell proliferation [ATAC-seq]
GSE277217	Role of the SAF-A SAP domain in X inactivation, transcription, splicing, and cell proliferation [CutandRun]
GSE277219	Role of the SAF-A SAP domain in X inactivation, transcription, splicing, and cell proliferation [DNA-seq]
GSE277221	Role of the SAF-A SAP domain in X inactivation, transcription, splicing, and cell proliferation [RNA-seq]
GSE277299	Androgen receptor inhibition increases MHC Class I expression and improves immune response in prostate cancer
GSE277548	Targeting the PDGFRa-SHP2 Signaling Enhances Therapeutic Effect of Radiotherapy on Treating IDH1 Mutant Glioma
GSE277567	Adipose-derived mesenchymal stem cells overexpressing thrombomodulin reduce thrombogenic risk and enhance therapeutic efficacy
GSE277609	Optimized Method to Generate Well-Characterized Macrophages from Induced Pluripotent Stem Cells
GSE277719	Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation [Hi-C]
GSE277720	Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation [ChIP-seq]
GSE277721	Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
GSE278191	High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops [1000U]
GSE278198	A disintegrin-like and metalloproteinase with thrombospondin motifs 18 (ADAMTS18) cleaves fibronectin and regulates its fibrillogenesis
GSE278221	Integrative multi-omics identifies AP-1 transcription factor as a targetable mediator of acquired osimertinib resistance in non-small cell lung cancer [ATAC-SEQ]
GSE278409	Integrative multi-omics identifies AP-1 transcription factor as a targetable mediator of acquired osimertinib resistance in non-small cell lung cancer [RNA_SEQ_FOSL1 and JUN KO]
GSE278487	Quantitative CRACI reveals transcriptome-wide dynamics of tRNA and mRNA dihydrouridylation at base resolution
GSE278538	Identification of RNAs that can accept assembly of an Sm-protein ring
GSE278572	Centralized control of dynamic gene regulatory circuits governs human T cell rest and activation [Perturb-CITE-seq]
GSE278880	Isocitrate Dehydrogenase 1 Primes Group-3 Medulloblastomas For Cuproptosis
GSE279023	Functional screen for mediators of onco-mRNA translation specificity [II]
GSE279116	Mapping and Quantification of Genome-wide DNA Damages by Catechol Estrogens Using Click probe-Seq and LC/MS2: Unraveling Endogenous Genotoxicity Beyond Receptor-mediated Signaling
GSE279423	Single-nucleotide-resolution genomic maps of O6-methylguanine from the glioblastoma drug temozolomide
GSE279474	PRMT5 regulates alternative splicing of TCF3 under hypoxia to promote EMT and invasion in breast cancer
GSE279479	High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops [600U]
GSE279583	High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops [800U]
GSE279732	High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops [200U]
GSE279772	Modeling in vivo induction of gastric insulin-secreting cells using transplanted human stomach organoids
GSE279951	Iron-sensitive RNA regulation by poly C binding proteins [P1KD]
GSE279953	Iron-sensitive RNA regulation by poly C binding proteins
GSE279958	Single cell RNA seq of micropatterns derived from Human ESC Micropatterns
GSE280044	RNA-seq analysis of NK-92 cells expressing Vaccinia virus (VACV) poxin (encoded by the B2R gene)
GSE280054	Inhibition of ADSS2-mediated de novo AMP biosynthesis resensitizes acute myeloid leukemia to BH3 mimetics [scRNA-seq]
GSE280170	Molecular Cartography of the Human and Mouse Down Syndrome Brain [Slide-seq]
GSE280393	The SAMD1 transcription factor coordinates hematopoietic lineage differentiation and H3K4 methylation status [CUT&RUN]
GSE280482	High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops (SDS test)
GSE280508	Evolutionarily guided transcription factor design programs novel T cell states [bulkRNA-seq]
GSE280509	Evolutionarily guided transcription factor design programs novel T cell states [scRNA-seq, MULTI-seq]
GSE280563	HIV-1 m6A methylome investigation by m6A-SAC-seq [CD4+ T cells]
GSE280650	Virus Entry is a Major Determinant of HCMV Latency in Monocytes
GSE280812	Gene expression profilling of day 30 cerebral organoids at the single cell level
GSE280833	Cell-cycle-dependent repression of histone gene transcription by histone H4
GSE281096	Single-cell and spatial transcriptomics identify COL6A3 as a prognostic biomarker in undifferentiated pleomorphic sarcoma [scRNA-Seq]
GSE281150	High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops
GSE281164	TFE3 fusion oncoprotein condensates drive epigenetic reprogramming and cancer progression [ATAC-Seq]
GSE281165	TFE3 fusion oncoprotein condensates drive epigenetic reprogramming and cancer progression [CUT&RUN]
GSE281252	Monitoring ORF10's Impact on Host Transcriptome Using Doxycycline-Inducible A549 and 293T Cell Lines.
GSE281313	single-cell multiomics data for the developing human pelvic girdle [Multiomics]
GSE281317	single-cell multiomics data for the developing human pelvic girdle [spatial]
GSE281374	The EP4 antagonist vorbipiprant and an anti-PD-1 in MSS mCRC
GSE281529	Single-cell and spatial transcriptomics identify COL6A3 as a prognostic biomarker in undifferentiated pleomorphic sarcoma
GSE281893	SFPQ protects DNA repeat stability by recruiting histone H3.3 chaperon activity to R-loop structures [ChIP-seq]
GSE281919	LBR and LAP2 mediate heterochromatin tethering to the nuclear periphery to preserve genome homeostasis
GSE282191	Functional dissection of metabolic trait-associated variants in steady state and stimulated human skeletal muscle cells
GSE282362	Optimized Methods for scRNA-seq and snRNA-seq of Skeletal Muscle Stored in Nucleic Acid Stabilizing Preservative
GSE282364	Anti-leukemic effect of TGN-1062, a novel CDK7 inhibitor, on AML-leukemic stem cells by targeting RNA modification and Mitochondrial metabolism
GSE282399	The effects of AMPK activator A-769662 on the transcriptome of pathological phenotypes following mitochondrial DNA depletion
GSE282453	Ion-coupled Transfersome Complexes for Enhanced Transdermal NAD+ Repletion and Defense Against Cellular Senescence Signatures
GSE282602	Gene expression proﬁling of MDA-MB-231 cells treated Compound 28, a CDK9 degrader
GSE282647	Role of POLR2A in kidney response to DNA damage
GSE282765	Eosinophils restrict CRC metastasis by inhibiting pro-tumorigenic Spp1+ macrophage differentiation.
GSE282823	FTO degrader inhibits acute myeloid leukemia by impairing ribosome biogenesis and translation
GSE282850	Functional dissection of metabolic trait-associated variants in steady state and stimulated human skeletal muscle cells [RNA-Seq]
GSE282945	The FAM53C/DYRK1A axis regulates the G1/S transition of the cell cycle
GSE283100	Epigenetic modulation of γ-globin expression as a new therapeutic approach for sickle cell disease
GSE283119	Linker histone H1-0 is a specific mediator of the ETV6::RUNX1 transcriptional landscape in preleukemia and B cell acute lymphoblastic leukemia
GSE283136	Non-destructive transcriptomics via vesicular export (NTVE)
GSE283144	Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy
GSE283180	Differential gene expression in leukemia is driven by enhancer heterogeneity [MCC]
GSE283182	Differential gene expression in leukemia is driven by enhancer heterogeneity
GSE283209	MYOD represses gene expression from non-Ebox motifs
GSE283210	Quantitative design of microRNA-responsive mRNA from expression data
GSE283444	Small molecule RNA therapeutics to target prostate cancer [DMS MaP-seq]
GSE283446	Small molecule RNA therapeutics to target prostate cancer [RNA-seq]
GSE283647	Metabolic Reprogramming into a Glycolysis Phenotype Induced by Extracellular Vesicles Derived from Prostate Cancer Cells
GSE283656	Assessing mifepristone's effects on endometrial tissue in women with BRCA mutations: A randomised clinical trial
GSE283992	CFTR gene regulation in pancreatic duct, bile duct and sweat gland
GSE284197	Dissecting Gene Regulatory Networks Governing Human Cortical Cell Fate
GSE284534	Rapid DNA and RNA isolation from few or single cells using low-cost NAxtra magnetic nanoparticles
GSE284783	Acetylated microtubules refine cytomegalovirus interactions with and remodeling of host chromatin [Hi-C]
GSE285168	Reduced TBX5 dosage causes human atrial disease by undermining developmental gene regulation of atrial cardiomyocyte identity [scATAC-seq]
GSE285174	Actin polymerization by WASp limits nuclear envelope rupture and inflammation in macrophages I
GSE285196	Pathogenesis of Graves' Disease Using Single-Cell Sequencing with Thyroid Autoantigens Peptides Stimulation in B Cells
GSE285268	Dose-dependent sensitivity of human 3D chromatin to a heart disease-linked transcription factor [ChIP-Seq]
GSE285274	Dose-dependent sensitivity of human 3D chromatin to a heart disease-linked transcription factor [Hi-C]
GSE285277	Dose-dependent sensitivity of human 3D chromatin to a heart disease-linked transcription factor [RNA-Seq]
GSE285436	RNA-seq analysis of grape-like organoids and others in iPSC derived Hepatocyte organoids (iHOs)
GSE285531	Transcriptional regulation of temporal dynamics in human neurogenesis and neuronal maturation [ATAC-seq]
GSE285532	Transcriptional regulation of temporal dynamics in human neurogenesis and neuronal maturation [CUT&Tag]
GSE285570	Transcriptional regulation of temporal dynamics in human neurogenesis and neuronal maturation [RNA-seq]
GSE285699	DNA topological regulation by topoisomerase IIβ-DNA-PK interaction is important for controlled hypoxia-inducible gene expression [TMP-seq]
GSE285881	The Role of BAZ2-dependent Chromatin Remodeling in Suppressing G4 DNA [HA] Structures and Associated Genomic Instability
GSE285882	The Role of BAZ2-dependent Chromatin Remodeling in Suppressing G4 DNA Structures and Associated Genomic Instability [G4]
GSE285900	Arsenic regulates ALKBH1 abundance and substrate specificity to promote translation and tumorigenicity
GSE285943	A reference model for circulating hematopoietic stem cells with applications to diagnostics
GSE285962	Transcriptional responses to nitric oxide are widescale and source-dependent
GSE285990	Chemotherapy triggers immune evasion by fostering LEPR+ Kupffer cell differentiation in liver metastases [RNA-seq]
GSE285991	Chemotherapy triggers immune evasion by fostering LEPR+ Kupffer cell differentiation in liver metastases
GSE286022	Genome-wide CRISPR knockout screen identifies Activating Transcription Factor (ATF1) as an activator of HIV gene expression that restricts entry into latency
GSE286040	Endothelial Sensitivity to Pro-Fibrotic Signals Links Systemic exposure to Pulmonary Fibrosis
GSE286227	Spatial transcriptomic profiling of the lung tissues from a patient with recurrent anti-synthetase syndrome associated interstitial lung disease after bilateral lung transplantation and one untreated patient
GSE286234	Bulk RNA-seq profiling of human head and neck squamous cell carcinoma (HNSCC) with primary tumors and metastatic lymph nodes
GSE286325	Transcriptomes of classical monocytes in post-COVID patients suggest predisposing condition or innate memory from SARS-CoV-2 infection
GSE286332	Dysregulation of Vitamin D and Its Signaling in Hashimoto's Thyroiditis in Korean Population
GSE286357	Transcriptional regulation of temporal dynamics in human neurogenesis and neuronal maturation [scRNA-seq]
GSE286472	FOXP3 Expression Depends on Cell-Type Specific Cis-Regulatory Element and Transcription Factor Circuitry [human_Treg_ChIP-seq]
GSE286473	FOXP3 Expression Depends on Cell-Type Specific Cis-Regulatory Element and Transcription Factor Circuitry
GSE287139	Programmable RNA-triggered counterselection in eukaryotic cells using CRISPR-Cas12a2
GSE287188	Effects of active-state RAS inhibition on the colorectal cancer cell transcriptome
GSE287229	RSK1-driven TRIM28-E2F1 feedback loop promotes castration-resistant prostate cancer progression
GSE287556	Intracellular traction forces modulate chromatin accessibility at the FOXO1 locus
GSE287558	Study 3- RNA-seq of male KOLF2.2J hiPSC-derived cortical brain organoids homozygous null for six different transcription factors
GSE287691	Effects of exposure to the trichloroethylene metabolite S-(1,2-dichlorovinyl)-L-cysteine on HTR-8/SVneo differential gene expression under hypoxic vs. normoxic conditions (O2 < 2%)
GSE287732	Study of epithelial-mesenchymal transition induced by POU1F1 in normal breast cells
GSE287792	PHLPP2 is a pseudophosphatase that lost activity in the metazoan ancestor
GSE287812	Reprogramming breast cancer cells to breast cancer stem cells-like by the POU1F1 transcription factor
GSE287843	Study 4- RNA-seq of male KOLF2.2J hiPSC-derived cortical brain organoids and extra-embryonic lineages homozygous null for six different transcription factors
GSE287844	Study 5- RNA-seq of male KOLF2.2J hiPSC-derived cortical brain organoids and extra-embryonic lineages homozygous null for nine different transcription factors and one RNA splicing factor
GSE287845	Bulk RNA-seq study 4 and 5: 17 genes knocked out in extra-embryonic and cortical brain organoids
GSE288026	A conserved short 3 ́UTR short motif regulates gene expression in vertebrates
GSE288099	restoring mitochondrial quantity and quality to reverse warburg effect and drive neuroblastoma differentiation
GSE288286	Study 6- RNA-seq of female WIBJ2 hiPSC-derived cortical brain organoids and extra-embryonic lineages homozygous null for five different transcription factors
GSE288287	Study 7- RNA-seq of male KOLF2.2J hiPSC-derived differentiated cells for lines in which the original mutation to create null alleles was reverted back to wildtype
GSE288288	Study 1- RNA-seq of male KOLF2.2J hiPSC-derived trophoblast cell lines homozygous null for seven different transcription factors
GSE288289	Study 2- RNA-seq of male KOLF2.2J hiPSC-derived trophoblast cell lines homozygous null for seven different transcription factors
GSE288317	Study 1 and Study 2 - RNA-seq of male KOLF2.2J hiPSC-derived trophoblast cell lines homozygous null for 14 different transcription factors
GSE288398	Bulk RNA seq timecourse of KOLF2.2J hiPSC after Auxin-induced protein degradation of specific gene products
GSE288436	IL-7-mediated expansion of autologous lymphocytes increases CD8+ T Cell VLA-4 expression and accumulation within glioblastoma
GSE288451	Early dissemination and prognostic value of circulating tumor cells in ductal carcinoma in situ
GSE288562	Multi-Omics Analysis of the Immunological State at Baseline and Following SARS-CoV-2 mRNA Vaccination in Lung Transplant Recipients
GSE288706	Mesenchymal stromal cells from JAK2V617F myeloproliferative neoplasms support healthy and malignant haematopoiesis in a humanised scaffold model in vivo
GSE288796	IFNλ1 is a STING-dependent mediator of DNA damage and induces Immune activation in lung cancer
GSE288996	Simultaneous single cell CRISPR, RNA, and ATAC-seq enables multiomic CRISPR screens to identify gene regulatory relationships
GSE289044	Spatial proteo-transcriptomic profiling reveals the molecular landscape of borderline ovarian tumors and their invasive progression
GSE289053	The ALS-associated co-chaperone DNAJC7 mediates neuroprotection against proteotoxic stress by modulating HSF1 activity
GSE289235	A Massively Parallel CRISPR-Based Screening Platform for Modifiers of Neuronal Activity
GSE289575	Multi-omics Analysis of Skeletal Muscle Identifies Dysregulation of Hypoxia-Induced Genes in Peripheral Artery Disease [RRBS]
GSE289689	Phenotypic variability in SCN1A-associated febrile seizures: transcriptomic and electrophysiological insights from iPSC-derived neurons
GSE289713	Superior preclinical efficacy of co-treatment with BRG1/BRM and FLT3 inhibitor against AML cells with FLT3 mutations
GSE289738	Effect of interleukin-1beta on confluent human lymphatic endothelial cells
GSE289962	Evaluation of toxicological mechanisms of ochratoxin-A in human primary proximal tubule epithelial cells
GSE290028	LSD1 inhibition attenuates targeted therapy-induced lineage plasticity in BRAFV600E colorectal cancer
GSE290091	Transcriptomic analysis of NGO (nano-graphene oxide) treated acute GVHD or nonGVHD patients' PBMC
GSE290132	HIV-Induced Sialoglycans on Infected Cells Promote Immune Evasion from Myeloid Cell-Mediated Killing
GSE290153	Uncovering genetic dependencies in the DNA repair network after ionizing radiation
GSE290222	Optogenetic mitochondrial preconditioning enhances cardiomyocyte survival under stress
GSE290359	Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [snRNAseq/snATACseq multiomics]
GSE290535	RNA Transcripts Serve as a Template for Double-Strand Break Repair in Human Cells
GSE290596	Discovery of Competent Chromatin Regions in Human Embryonic Stem Cells [scRNA-seq]
GSE290724	Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration [Spatial transcriptomics]
GSE290725	Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration [methylation]
GSE290847	In-depth examination of an iPSC-derived model of human eye development identifies multiple embryonic cell types of critical importance to ocular genesis and disease
GSE290931	Controlling nephron precursor differentiation to generate proximal-biased kidney organoids with emerging maturity [snRNA-Seq]
GSE291052	Characterization of human healthy i3 lower motor neurons exposed to CSF from ALS patients stratified by UNC13A and C9ORF72 genotype
GSE291135	Oxidative stress and GPX2 control pancreatic vs non-pancreatic cell fate in human endoderm
GSE291155	Unlocking single cell chromatin accessibility in formalin-fixed paraffin-embedded tissues by scFFPE-ATAC
GSE291384	Multiplex base editing of BCL11A regulatory elements to treat sickle cell disease
GSE291410	Redox Regulation of Lung Endothelial PERK, Unfolded Protein Response (UPR) and Proliferation via NOX1: Targeted Inhibition as a Potential Therapy for PAH
GSE291458	Supplementing CD2 expression enhances CAR-T Cell Efficacy through Optimizing CAR-immunological Synapse formation
GSE291564	Characterization of a gene expression biomarker predictive of hypoxia-inducible factor-1 modulation
GSE291718	Analysis of chromatin accessibility relative to epigenetic features of azacitidine response in high-risk myelodysplastic syndrome
GSE291820	Decidual ESF co-culture with primary EVTs
GSE291960	Improved split prime editors enable efficient in vivo genome editing.
GSE292363	p53 drives epigenetic programs associated with luminal cell identity in breast cancer [RNA-seq]
GSE292364	p53 regulates the expression of histone modifiers to restrict stemness and maintain differentiated luminal identity in breast cancer
GSE292454	ATF4:p52 Complex Activates Oncogenic Enhancers in Multiple Myeloma via p300/CBP Recruitment to Regulate BACH1
GSE292596	Cohesin supercoils DNA during loop extrusion
GSE292617	CREsted: modeling genomic and synthetic cell type-specific enhancers across tissues and species
GSE292620	Genome-wide CRISPR Screen Identifies BUB1 Kinase as a Druggable Vulnerability in Malignant Pleural Mesothelioma
GSE292627	Stromal lipid species dictate melanoma metastasis and tropism [A375_RNA_seq]
GSE292628	Stromal lipid species dictate melanoma metastasis and tropism [MeWo_RNA_seq]
GSE292722	Common AAV gene therapy vectors show nonselective transduction of ex vivo human brain tissue
GSE292732	A pilot trial of perioperative IDH Inhibition in treatment-naïve IDH-mutant glioma
GSE292777	Incorporating Metabolic Competence into High-Throughput Profiling Assays
GSE292909	Disease-associated loci share features with loci that regulate gene expression in response to environmental perturbations
GSE292924	Effects of Normoxia, Hypoxia, Oscillatory Hypoxia, and Lactate on Wild-Type, NOTCH1-Knockdown, and TP53-Knockdown MDA-MB-231 Cells
GSE292959	9-cis-retinoic acid improves disease modelling in iPSC-derived liver organoids
GSE292995	REGION-SPECIFIC GENE EXPRESSION AND SEX INFORM ABOUT DISEASE SUSCEPTIBILITY IN THE AORTA - MCAM Knockdown
GSE293163	Transcriptomic analysis of peripheral blood mononuclear cells reveals age specific differences at baseline and response to acute exercise
GSE293189	Histologic variants in bladder cancer share aggressive molecular features including a CA125+ cell state and targetable TM4SF1 expression
GSE293237	Axial Nephron Fate Switching Demonstrates a Plastic System Tunable on Demand
GSE293399	snATAC data analysis for Hidradentis Suppurativa patients' epidermis
GSE293514	Development of a split-toxin CRISPR screening platform to systematically identify upstream regulators of human myoblast fusion
GSE293633	AI-generated MLH1 small binder improves prime editing efficiency
GSE293692	Menin-MLL complex cooperates with NF-Y to promote HCC survival [CUT&RUN]
GSE293920	Programmable RNA acetylation with CRISPR-Cas13
GSE294057	Unveiling Tissue-Specific Transcriptional Adaptations in iPSC-Derived Fibroblasts via Co-Culture Systems
GSE294197	Ultra-mild bisulfite outperforms existing methods for 5-methylcytosine detection with low input DNA
GSE294544	Research on the effect of PRMT5 on the genomic binding sites of ΔNp63α and its impact on the global transcriptomic regulation in the human tongue squamous cell carcinoma cell line UM1.
GSE294577	Ablation of VEGFA following a lumbar intervertebral disc injury attenuates intradiscal neurovascular features and prevents chronic low back pain symptoms
GSE294754	MiNK-215: Allogeneic FAP-CAR-IL15 iNKT therapy remodels tumor stroma to enhance anti-tumor immunity
GSE294775	Fate mapping of peripherally derived macrophages reveals a long-lasting engrafted population that maintains a distinct transcriptomic profile for up to 8 months after Traumatic Brain Injury IV
GSE294792	Nuclear 2′-O-methylation regulates RNA splicing through its binding protein FUBP1 (Nm-mut-seq)
GSE294793	Nuclear 2′-O-methylation regulates RNA splicing through its binding protein FUBP1 (CLIP-seq and PAR-CLIP)
GSE294883	Incomplete paralog compensation generates selective dependency on TRA2A in cancer
GSE294915	IFNγ-induced memory in human macrophages is not sustained by epigenetic changes but the durability of the cytokine itself [ATAC-Seq]
GSE294916	IFNγ-induced memory in human macrophages is not sustained by epigenetic changes but the durability of the cytokine itself [CUT&Tag]
GSE294935	Induced neural progenitor specification from human pluripotent stem cells by a refined synthetic Notch platform
GSE294995	Transcriptional responses to nitric oxide are widescale and source-dependent (calcium)
GSE295018	The effect of PTEN inhibitor on Periodontal ligament cells
GSE295024	Imlunestrant: A next-generation oral SERD overcomes ESR1 mutant resistance in estrogen receptor-positive breast cancer
GSE295064	Transcriptional responses to nitric oxide are widescale and source-dependent
GSE295080	Disambiguating Transcriptional Effects from Post-Transcriptional Effects of Genetic Variants with an Inferred Stability Optimized Massively Parallel Reporter Assay (ISOMPRA).
GSE295408	Targeting serotonin-driven histone serotonylation suppresses lineage plasticity and progression of NEPC
GSE295527	Evaluating the practical aspects and performance of commercial single-cell RNA sequencing technologies
GSE295558	Large-scale bidirectional arrayed CRISPR screens identify OXR1 and EMC4 as modifiers of α-synuclein aggregation
GSE295823	Integrative multi-omics identifies AP-1 transcription factor as a targetable mediator of acquired osimertinib resistance in non-small cell lung cancer
GSE296029	Combinatorial BMP4 and Activin direct choice between alternate routes to endoderm during human gastrulation [RN25025_RNAseq]
GSE296060	Myricone C, a novel neolignan from Myristica fragrans, induces ER stress-mediated apoptosis in gastric and colorectal cancer via ROCK inhibition
GSE296112	Augment proteasome inhibitor efficacy activates CD8+ T cell-mediated antitumor immunity in breast cancer
GSE296164	Bone marrow and blood demonstrate distinct immune reconstitution patterns and correlations with relapse post-transplant
GSE296342	The catalytic efficiency of METTL16 affects cellular methyltransferase activities by governing the intracellular S-adenosylmethionine setpoint
GSE296358	ApoE4 disrupts intracellular trafficking and iron homeostasis in an improved iPSC-based model of human brain endothelial cells [bulk RNA-seq]
GSE296377	ApoE4 disrupts intracellular trafficking and iron homeostasis in an improved iPSC-based model of human brain endothelial cells [Bulk RNA-seq 2]
GSE296399	Paired single-cell and spatial transcriptional profiling reveals a central osteopontin macrophage response mediating tuberculous granuloma formation in humans and zebrafish [scRNA-Seq]
GSE296400	Paired single-cell and spatial transcriptional profiling reveals a central osteopontin macrophage response mediating tuberculous granuloma formation in humans and zebrafish [Spatial Transcriptomics]
GSE296403	RNA-Seq of PBMC of FAP patient before and after a low-inflammatory diet
GSE296547	Hypoxia promotes airway differentiation in the human lung epithelium [scRNAseq_hypoxia_AT2]
GSE296669	Identification of human macrophage tissue signatures at homeostasis and during polarization
GSE296683	Tomatidine Attenuates Inflammatory Responses to Exercise-Like Stimulation in Donor-derived Skeletal Muscle Myobundles
GSE296750	Intracellular Delivery of Bone Nanoparticles to Mitigate Irradiation-Induced Damage in Bone Marrow Mesenchymal Stem Cells
GSE296828	Abatacept Restores Dysregulated Transcriptomic and Proteomic Profiling in LRBA Deficiency and CTLA-4 Insufficiency
GSE296838	Docetaxel treatment upregulates estrogen receptor expression in triple negative breast cancer cells via activating arachidonic acid pathway
GSE296943	Deciphering HAND Pathogenesis Using Single-Nucleotide Omics Approaches
GSE297299	Mismanagement of Cellular Iron Leads to Ferroptosis Susceptibility in Cancer Cells Surviving Chemotherapy
GSE297352	Defective RNA processing and ELOA-mediated transcriptional elongation in reversible cellular senescence suggest aging by transcription
GSE297393	Single-cell RNA sequencing reveals distinct senotypes and a quiescence-senescence continuum at the transcriptome level following chemotherapy
GSE297471	Genetic and epigenetic screens in primary human T cells link candidate causal autoimmune variants to T cell networks [MPRA]
GSE297472	Genetic and epigenetic screens in primary human T cells link candidate causal autoimmune variants to T cell networks
GSE297577	Transcriptional profiles of castration resistant prostate cancer cells treated with ITRI-148 PROTAC targeting AR and AR-V7
GSE297589	Cytotoxicity caused by 5-methylcytosine depletion on chromatin-associated RNA by 5-azacytosine in leukemia [CUT&Tag]
GSE297591	Cytotoxicity caused by 5-methylcytosine depletion on chromatin-associated RNA by 5-azacytosine in leukemia [RNA-seq]
GSE297594	MeCP2 regulates telencephalic development in human cerebral organoids
GSE297680	Free-floating Long-term Vascularized Mesenchymal Organoids [scRNA-seq]
GSE297712	Gene regulatory programs of NK cells show that NCAM1 (CD56) and KIRs are controlled by genetically polymorphic distal regulatory elements [scATAC-seq]
GSE297907	Differential gene expression in leukemia is driven by enhancer heterogeneity [CUT&TAG]
GSE297929	Differential gene expression in leukemia is driven by enhancer heterogeneity [Whole Genome Sequencing]
GSE297954	Recreating pathophysiology of CLN2 disease and demonstrating reversion by TPP1 gene therapy in hiPSCs-derived retinal organoid and retina-on-chip
GSE297966	Nuclear functions of CFAP20 in transcription and replication [ChIP-seq TY-CFAP20]
GSE298160	SETD6 Mediates Selective Interaction and Genomic Occupancy of BRD4 and MITF in Melanoma [RNA-seq]
GSE298161	SETD6 Mediates Selective Interaction and Genomic Occupancy of BRD4 and MITF in Melanoma [CUT&Run]
GSE298200	Gene regulatory programs of NK cells show that NCAM1 (CD56) and KIRs are controlled by genetically polymorphic distal regulatory elements
GSE298261	Exploiting collateral sensitivity in the evolution of resistance to tyrosine kinase inhibitors in soft tissue sarcomas.
GSE298393	Microgravity Accelerates Skeletal Muscle Degeneration: Functional and Transcriptomic Insights from a Muscle Lab-on-Chip Model Onboard the ISS.
GSE298439	γδ T Cells Target and Ablate Senescent Cells in Aging and Alleviate Pulmonary Fibrosis
GSE298535	Sensitive and unbiased genome-wide profiling of base-editor-induced off-target activity with CHANGE-seq-BE
GSE298663	Immunometabolic determinants of long-term response in leukemia patients receiving CD19 CAR T cell therapy
GSE298732	Transcriptional and functional architecture of the whole neutrophil compartment
GSE298861	Retinoic acid and ascorbate synergize to suppress myeloid leukemia via TET2 activation [MV4-11 ATAC-seq]
GSE298868	Integrated Single-Cell Lung Cancer Atlas Revealed Distinct Fibroblast Phenotypes between Adenocarcinoma and Squamous Cell Carcinomas
GSE298872	Breast Cancer Remodels Lymphatics in Sentinel Lymph Nodes
GSE299111	Regulatory T cells in lung tumor shape an anti-inflammatory myeloid-landscape recovery after chemotherapy
GSE299480	Transcriptome change of Palmitic acid-treated human aortic smooth muscle cells
GSE299651	Pooled single-cell screening in colorectal cancer identifies transcriptional modules of clinical relevance unlocked by oncogenes
GSE299939	EBV induces CNS homing of B cells attracting inflammatory T cells
GSE300142	Tumor Acidosis Remodels the Glycocalyx to Control Lipid Scavenging and Ferroptosis
GSE300163	The Breakome of BRCA1 and BRCA2 Mutation Carriers Reveals Early Processes in Breast Oncogenesis
GSE300334	p52:ETS1: a transcriptional complex essential for germinal center formation [ChIP-seq]
GSE300405	Effect of PRLX-93936 treatment on gene expression of PANC-1 cells
GSE300482	Single nuclei RNAseq of human Rett syndrome neurons cortical samples after sorting for MECP2 expression
GSE300543	Essential function of the integrator complex in Kaposi's sarcoma-associated herpesvirus lytic replication
GSE300544	The Integrator complex is required for optimal lytic lifecycle of Kaposi’s Sarcoma-Associated Herpesvirus [ChIP-seq]
GSE300565	MRPL37 promotes hepatocellular carcinoma progression through modulating mitochondrial energy metabolism
GSE300645	Dysmorphic neurons express markers of inhibitory glycinergic signaling in focal cortical dysplasia
GSE300789	Sustained Mesenchymal Reprogramming of Endothelial Cells after Completion of Chemotherapy [RNA-seq]
GSE300844	Deciphering the functional impact of Alzheimer’s Disease-associated variants in resting and proinflammatory immune cells
GSE301119	Integrative analysis of pooled CRISPR screens provide functional insights into AD GWAS risk genes
GSE301307	Modulating SPARC Expression in Mesenchymal Stem Cells Improves Secretome-Mediated Skin Regeneration and Wound Repair
GSE301498	B cells specific for polyomavirus-derived oncoprotein are predictive of Merkel cell carcinoma progression
GSE301528	Comprehensive evaluation of bone marrow microenvironment in patients with autoimmune hemolytic anemia: from trephine biopsy to single cell RNA sequencing.
GSE301725	Human Neural Organoid Microphysiological Systems Show the Building Blocks Necessary for Basic Learning and Memory
GSE301787	Defined human tri-lineage brain microtissues
GSE301852	IGFBP2 Mediates Human iPSC-Cardiomyocyte Proliferation in a Cellular Contact-Dependent Manner
GSE301954	Comprehensive analysis of microRNA expression provides mechanistic insights into transcriptomic alteration in primary and metastatic testicular germ cell tumors
GSE301996	Identification of Novel DNA Sequence Motifs that Modulate Transcription in T cells
GSE302285	Single Cell Transcriptomics of Refractory Epilepsy (RE) patients in Colombia.
GSE302393	Iron-sensitive RNA regulation by poly C binding proteins [DKD_RNASeq]
GSE302514	Tonic Signaling Shaped by Epitope Targeting Governs CAR-T Cell Fitness and Antitumor Activity in Diffuse Midline Glioma [RNA-Seq]
GSE302997	Bulk RNA-seq study 8- RNA-seq of male KOLF2.2J hiPSC-derived trophoblast cell lines homozygous null for nine different transcription factors.
GSE303127	Ectopic expression of BEX genes in T-cell Acute Lymphoblastic Leukemia [RNA-Seq]
GSE303130	Ectopic expression of BEX genes in T-cell Acute Lymphoblastic Leukemia [CUT&Tag]
GSE303174	A portable poison exon for small molecule control of mammalian gene expression
GSE303463	Clinical and Molecular differences of hypertensive disorders during pregnancy
GSE303737	The obesity-linked peptide SP16 regulates adipocytes through GIP and insulin receptor
GSE303862	A Microcavity-Based Sarcoma Spheroid Model for Drug Efficacy and Mechanism Analysis Using Cost-effective 3D Printing Technology
GSE303868	A tumor-associated macrophage-targeted immunocytokine leveraging T and NK cell synergy for potent cancer immunotherapy [CITE-seq]
GSE303870	A tumor-associated macrophage-targeted immunocytokine leveraging T and NK cell synergy for potent cancer immunotherapy
GSE303918	Bulk RNA-seq study 9- RNA-seq of male KOLF2.2J hiPSC-derived cortical brain organoids homozygous null for eight different transcription factors.
GSE303919	Bulk RNA-seq study 10- RNA-seq of male KOLF2.2J hiPSC-derived endoderm and mesoderm homozygous null for three different transcription factors.
GSE303979	Bulk RNA-seq study 11- RNA-seq of male KOLF2.2J hiPSC-derived cortical brain organoids during different time points.
GSE304295	Effect of adenoviral E1A on oxaliplatin response in oxaliplatin-sensitive and resistant human colorectal cancer HCT116 cells
GSE304350	Distinct and convergent effects of SF3B1 mutations in human breast cancer
GSE304548	ALS-Associated TDP-43 Dysfunction Compromises UPF1-Dependent mRNA Metabolism Pathways Including Alternative Polyadenylation and 3’UTR Length [IPS_RNASeq]
GSE304669	Spatial transcriptomics reveals distinct role of monocytes/macrophages with high FCGR3A expression in kidney transplant rejections
GSE305062	FOXP3 Expression Depends on Cell-Type Specific Cis-Regulatory Element and Transcription Factor Circuitry [CRISPRoff_RNA-seq]
GSE305063	FOXP3 Expression Depends on Cell-Type Specific Cis-Regulatory Element and Transcription Factor Circuitry [human_Tconv_ChIP-seq]
GSE305164	ACTL6A regulates the Warburg effect through coordinated activation of AP-1 signaling in head and neck squamous cell carcinoma
GSE305194	Waves of cell death modulate the abundance and maturation of human retinal ganglion cells
GSE305464	Pre-clinical proof-of-concept of anti-fibrotic activity of caveolin-1 scaffolding domain peptide LTI-03 in ex vivo precision cut lung slices from patients with Idiopathic Pulmonary Fibrosis
GSE305987	A Tonic Signaling Code Governs CAR-T Cell Efficacy in Diffuse Midline Glioma
GSE306117	Distinct genomic and immunologic tumor evolution in germline TP53-driven breast cancers
GSE306157	Distinct miRNA profiles in human amniotic tissue and its vesicular and non-vesicular secretome
GSE306223	Effects of Acute and Chronic Type I Interferon Stimulation on Human Cardiomyocytes
GSE306283	Silencing AADAC enhances trophoblast invasion and reveals a protective angiogenic role in severe preeclampsia
GSE306345	GSX2 Regulates Progenitor Maturation and Regional Identity Through Transcriptional Repression in the Developing Basal Ganglia [ChIP-Seq]
GSE306350	GSX2 Regulates Progenitor Maturation and Regional Identity Through Transcriptional Repression in the Developing Basal Ganglia [ATAC-seq]
GSE306441	GVH_transcriptomic_validation_cohort
GSE306600	A disintegrin-like and metalloproteinase with thrombospondin motifs 18 (ADAMTS18) cleaves fibronectin and regulates its fibrillogenesis
GSE306759	Effect of palmitate on breast cancer cells according to CD36 expression
GSE306820	Generation and characterization of iPSC derived microglia from blood derived PBMCs for in vitro modeling of stimuli-specific neuroimmune responses
GSE306917	Integrated epigenetic and genetic programming of primary human T cells [WGBS]
GSE307124	Microglia-containing neural organoids as brain microphysiological systems for long-term culture
GSE307240	Epigenetic and transcriptional heterogeneity define osteosarcoma subtypes and establish targetable vulnerabilities [multiomics]
GSE307296	Multidimensional Deep Receptor Scanning Reveals Constraints on GPCR Biosynthesis [Ribo-Seq]
GSE307319	CHAMP1 is an essential regulator for human myoblast fusion and muscle development
GSE307322	SPANXA2-OT1 promotes macrophage chemotaxis
GSE307449	Mechanoresponsive genomic enhancers potentiate the cellular response to matrix stiffness [hicar]
GSE307827	Intra-leukemic interferon signaling suppresses expansion and mediates chemoresistance in human AML
GSE307861	Maintenance of gene expression homeostasis by systems-level feedback loops in response to changes in RNA polymerase II dosage [RNAPII_levels_mRNAseq]
GSE307892	Sensitive and unbiased genome-wide profiling of base-editor-induced off-target activity with CHANGE-seq-BE [Hybrid Capture Sequencing for Cas9]
GSE307914	Autologous multiantigen-targeted T cell therapy for pancreatic ductal adenocarcinoma: results of a Phase I, three-arm, nonrandomized clinical trial (TACTOPS)
GSE307925	Proliferative diabetic retinopathy subtypes defined by immune defense and endothelial mitochondrial dysfunction
GSE307991	FRA1 (FOSL1) Suppresses Neoplastic Transformation and Modulates Radiation Responses via Transcriptional Control of Mitogenic and Stress-Responsive Networks
GSE308237	Sensitive and unbiased genome-wide profiling of base-editor-induced off-target activity with CHANGE-seq-BE [Hybrid Capture Sequencing for CBE and ABE]
GSE308352	Integration protocol of microglia and cerebral organoid
GSE308360	Lactate promotes cholesterol uptake by facilitating SCARB1 expression through histone H3K18 lactylation
GSE308443	Alternative Splicing And Global Transcriptome Changes Associated with LPS Stimulation in Human Peripheral Blood Mononuclear Cells
GSE308505	A protocol for high-throughput microplate-based CUT&Tag
GSE308686	Catch and release of sialoglycoRNAs enables sequencing-based profiling across cellular and extracellular material
GSE308896	Cancer cells transfer invasive properties through microRNAs contained in collagen-tracks
GSE308909	Temporal dynamics of collateral RNA cleavage by LbuCas13a in human cells
GSE308957	Epigenetic heterogeneity and state-specific transcriptional programs determine differential drug response in osteosarcoma. [ATAC-Seq, cell line]
GSE309005	Effect of CDK8/19 kinase inhibitor SNX 631 on OV90 parental and anoikis resistant isogenic lines
GSE309031	Epigenetic heterogeneity and state-specific transcriptional programs determine differential drug response in osteosarcoma [CUT&Run]
GSE309248	Generation of spinal cord organoids from human induced pluripotent stem cells caudalised to a lumbar fate
GSE309271	N1-Methylpseudouridine Directly Modulates Translation Dynamics
GSE309294	Human pancreatic ductal cells from non-T1D donors respond to T1D cytokines and function as non-professional antigen presenting cells
GSE309393	Cancer-associated fibroblasts promote esophageal carcinogenesis and lung metastasis by CDH11-mediated extracellular matrix environment remodeling [RNA-Seq]
GSE309539	RNA alterations induced by influenza infection
GSE309548	Transcriptional dysregulation in the spinal cord of SCA3 provides insights into disease mechanisms [Human_RNAseq]
GSE309644	High-throughput characterization of transcription factors that modulate UV damage formation and repair at single-nucleotide resolution
GSE310041	Bulk RNA-Seq of head and neck squamous cell carcinomas
GSE310067	Human fallopian tube epithelial organoids with TP53 mutation recapitulate features of serous tubal intraepithelial carcinoma (STIC)- RNA-sequencing
GSE310125	Single-cell transcriptomic profiling of the developing human brain (GW 13, 15, and 19)
GSE310384	Age-independent and targetable transcription factor networks regulate CD8+ T cell senescence in aging humans [CUT&Tag]
GSE310393	Age-independent and targetable transcription factor networks regulate CD8+ T cell senescence in aging humans [ATAC-seq_inhibitors]
GSE310429	Human fallopian tube epithelial organoids with TP53 mutation recapitulate features of serous tubal intraepithelial carcinoma (STIC) -LP-WGS
GSE310490	PTEN variant and genetic backgrounds combine to modify cerebellar neuronal differentiation in autism spectrum disorder
GSE310492	ADH1C downregulation is a key hypoxia response in colon epithelium
GSE310525	The Nuclear Matrix Regulates Gene Induction By Maintaining the Chromatin-Speckle Association and Compartmentalization [CLIP-Seq]
GSE310527	The Nuclear Matrix Regulates Gene Induction By Maintaining the Chromatin-Speckle Association and Compartmentalization [Hi-C]
GSE310581	Spatially controlled enhanced anti-tumor efficacy via CAR T cells engineered with a CTLA-4-based autoregulated circuit
GSE310614	Mutant p53 binds RNA to drive mitochondrial dysfunction [RNA-seq]
GSE310625	Age-independent and targetable transcription factor networks regulate CD8+ T cell senescence in aging humans [RNA-seq_inhibitors]
GSE310669	TCF3::HLF orchestrates an enhancer-promoter network with activation of MEF2C to promote an immature HSC gene expression program in leukemia
GSE310729	Age-independent and targetable transcription factor networks regulate CD8+ T cell senescence in aging humans [RNA-seq_RNAi_TFs]
GSE310940	Determinants of “placental” versus “maternal” preeclampsia
GSE311038	Multi-omics integrative approach of senescent endothelial cells and derived extracellular vesicles in a replicative senescence model [RNA-seq]
GSE311039	Multi-omics integrative approach of senescent endothelial cells and derived extracellular vesicles in a replicative senescence model [miRNA-seq]
GSE311040	Multi-omics integrative approach of senescent endothelial cells and derived extracellular vesicles in a replicative senescence model
GSE311138	The Nuclear Matrix Regulates Gene Induction By Maintaining the Chromatin-Speckle Association and Compartmentalization [RNA-Seq]
GSE311170	Combining CDK12 and BAF inhibition synergistically impairs cancer cell survival in triple-negative breast cancer line
GSE311253	RNA-seq profiling of ADAM10 inhibition in DLD-1 and SW620 colorectal cancer cell lines
GSE311262	Recapitulating Patient-to-Patient Colorectal Cancer Tumor Heterogeneity Using Patient-Derived Xenograft Cells in an Engineered Tissue Model
GSE311294	Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer
GSE311423	Single-nucleus Multiome Profiling of Infant and Adult Human Spleen
GSE311654	ZNF865 (BLST) Regulates Human Cell Senescence and DNA Damage [ATAC-seq]
GSE311656	ZNF865 (BLST) Regulates Human Cell Senescence and DNA Damage [RNA-seq]
GSE311657	ZNF865 (BLST) Regulates Human Cell Senescence and DNA Damage
GSE311761	Spec-seq data for human and macaque ZNF626 with replicates
GSE311906	A targetable developmental program co-regulates angiogenesis and immune evasion [ChIP-seq, ATACseq and CUT&Tag]
GSE311907	A targetable developmental program co-regulates angiogenesis and immune evasion [Hi-C]
GSE311908	A targetable developmental program co-regulates angiogenesis and immune evasion [RNA-Seq]
GSE311909	A targetable developmental program co-regulates angiogenesis and immune evasion [Spatial Transcriptomics]
GSE312034	The Nuclear Matrix Regulates Gene Induction By Maintaining the Chromatin-Speckle Association and Compartmentalization
GSE312185	Enrichment of DNA hypomethylated regions for biomarker discovery using 5-methylcytosine glycosylase [human_DMNseq]
GSE312238	Sensitive and unbiased genome-wide profiling of base-editor-induced off-target activity with CHANGE-seq-BE [Digenome-seq]
GSE312322	Identification of genomic features that uniquely impact estrogen receptor alpha binding and its effects on gene expression in endometrial cancer [CRISPRScreen]
GSE312368	A targetable developmental program co-regulates angiogenesis and immune evasion.
GSE312485	Regulation of INSM1 Gene Expression and Neuroendocrine Differentiation in High-Risk Neuroblastoma
GSE312906	Identification of genomic features that uniquely impact estrogen receptor alpha binding and its effects on gene expression in endometrial cancer
GSE312998	Discovery and Functional Characterization of Novel Non-Coding Variants in a Case of Late-Onset Familial Cerebral Cavernous Malformation [RNA-seq]
GSE313368	Dictionary of human intestinal organoid responses to secreted niche factors at single cell resolution
GSE313376	Discovery of Competent Chromatin Regions in Human Embryonic Stem Cells [ATAC-seq]
GSE313379	Discovery of Competent Chromatin Regions in Human Embryonic Stem Cells [ChIP-Seq 2]
GSE313800	RNA-seq of ISL1 overexpression during islet differentiation.
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