| GSE230559 |
Deconvoluting clonal and cellular architecture in IDH-mutant Acute Myeloid Leukemia |
| GSE231717 |
Adaptation to Volumetric Compression Drives an Apoptosis-Resistant and Invasive Phenotype in Liver Cancer |
| GSE231906 |
Single-cell analysis of human thymus and peripheral blood unveils the dynamics of T-cell development and aging. |
| GSE232641 |
Differential Tropisms of Old and New World Hantaviruses Influence Virulence and Developing Host-Directed Antiviral Candidates |
| GSE233555 |
Calibrated ribosome profiling assesses the dynamics of ribosomal flux on transcripts |
| GSE233958 |
Basis of gene-specific transcription regulation by the Inegrator Complex |
| GSE235294 |
PBRM1 directs PBAF to pericentromeres and protects centromere integrity [CUT&RUN] |
| GSE235344 |
PBRM1 directs PBAF to pericentromeres and protects centromere integrity |
| GSE237154 |
Monitoring the complexity and dynamics of mitochondrial translation |
| GSE238106 |
High-dimensional analysis reveals increased chromatin heterogeneity and reduced histone acetylation driven by mutant-IDH1 |
| GSE239270 |
Investigate FOXA2, NKX2-1, CTCF and P300 cistrome and enhancer (H3K27ac and H3k4me1) reprogramming during NEPC transformation by ChIP-seq. |
| GSE239272 |
Investigate FOXA2 mediated chromatin 3D confirmation reorganization during NEPC transformation by Hi-C. |
| GSE239278 |
Epigenetic remodeling and 3D chromatin reorganization governed by NKX2-1 drive neuroendocrine prostate cancer |
| GSE239702 |
Circular RMST cooperates with lineage-driving transcription factors to govern neuroendocrine transdifferentiation |
| GSE240569 |
mRNA bisulfite sequencing of pluripotent stem cells and the derived cardiomyocytes |
| GSE241338 |
Genome-wide interference of chromatin architecture and Mediator in transcriptional bursting and gene network regulation |
| GSE241585 |
Retinoic acid and ascorbate synergize to suppress myeloid leukemia via TET2 activation |
| GSE245771 |
Differential DNA methylation occurs in RUNX1 heterozygous mutations harboring hematopoietic progenitor cells |
| GSE245943 |
RNA sequestration regulates cell fate |
| GSE246931 |
Specific cPRC1 complexes are co-opted to mediate oncogenic gene repression in diffuse midline glioma |
| GSE248231 |
Generation of human neuromusculoskeletal tri-tissue organoids |
| GSE250303 |
Telomeric Repeat-Containing RNA Increases in Aged Human Cells |
| GSE250510 |
Cohesin phosphorylation accelerates DNA damage repair and reduces translocations |
| GSE252392 |
U1 snRNP regulates alternative promoter activity by inhibiting premature polyadenylation |
| GSE253099 |
CRISPRi Screening of Enhancers in Human Primary Astrocytes Identifies Regulatory Circuitry Disrupted in Alzheimer’s Disease [RNA-seq] |
| GSE254753 |
Epigenetic memory of radiotherapy in dermal fibroblasts impairs wound repair capacity in cancer survivors (ATAC-Seq) |
| GSE254866 |
Regulation of stochastic gene bursting by chromatin-independent acetylation |
| GSE255998 |
Open chromatin, HIF binding and mRNA expression analysis in primary tubule and ccRCC cells [ATAC-seq] |
| GSE255999 |
Open chromatin, HIF binding and mRNA expression analysis in primary tubule and ccRCC cells [CUT&Tag] |
| GSE256000 |
Open chromatin, HIF binding and mRNA expression analysis in primary tubule and ccRCC cells [RNA-seq] |
| GSE256001 |
Open chromatin, HIF binding and mRNA expression analysis in primary tubule and ccRCC cells |
| GSE256182 |
Deciphering the Sperm RNA Code of Aging with PANDORA-seq |
| GSE260520 |
Basis of gene-specific transcription regulation by the Inegrator Complex (ChIP-Seq II) |
| GSE261129 |
Circular RNA circZFPM2 regulates cardiomyocyte hypertrophy and survival |
| GSE261187 |
Epigenetic priming induces cancer testis antigens and human endogenous retroviruses in glioma for enhanced T cell responses at single cell resolution (bulk RNA-Seq) |
| GSE261188 |
Epigenetic priming induces cancer testis antigens and human endogenous retroviruses in glioma for enhanced T cell responses at single cell resolution (scRNA-Seq) |
| GSE261191 |
Epigenetic priming induces cancer testis antigens and human endogenous retroviruses in glioma for enhanced T cell responses at single cell resolution |
| GSE261265 |
The interplay between RNA sequestration in P-bodies and chromatin architecture sustains myeloid leukemia [CUT&RUN] |
| GSE262060 |
Functional activity scores of a DMS library representing coding single residue substitution variants in the transcription factor CRX measured in an engineered reporter cell line |
| GSE262355 |
Programmable transcript-specific enrichment for single-cell sequencing enables profiling of rare cell states |
| GSE262590 |
LARP3, LARP7, and MePCE are Involved in the Early Stage of Human Telomerase RNA Biogenesis |
| GSE262779 |
Monitoring of melanoma patients on treatment reveals a distinct macrophage population driving targeted therapy resistance |
| GSE262826 |
Thr4 phosphorylation on RNA Pol II occurs at early transcription regulating 3’-end processing |
| GSE263034 |
Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1] |
| GSE263038 |
Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset2] |
| GSE263079 |
Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3] |
| GSE263356 |
Gene expression profiling of sorted primary human bronchial epithelial cell populations |
| GSE263424 |
Transcriptomic Analysis of C918 Cells Treated with 400μM Tetracaine Hydrochloride (TTC) for 24 Hours |
| GSE263725 |
The N6-methyladenosine Epitranscriptomic Landscape of Lung Adenocarcinoma [RIP-seq] |
| GSE263727 |
The N6-methyladenosine Epitranscriptomic Landscape of Lung Adenocarcinoma |
| GSE263881 |
Genetic disruption of class I HLA in cutaneous T-cell lymphoma |
| GSE264204 |
Girolline is a sequence-context specific modulator of eIF5A activity |
| GSE264398 |
Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity [Visium] |
| GSE264498 |
YTHDF1 CLIP-seq in WT and DHX36-KO HEK293T cells |
| GSE264600 |
Transcriptome profiling of RBM3 overexpression in A431 cells |
| GSE264642 |
DHX36 binding induces RNA structurome remodeling and regulates RNA abundance via m6A/YTHDF1 |
| GSE264678 |
Controlling nephron precursor differentiation to generate proximal-biased kidney organoids with emerging maturity [scRNA-Seq] |
| GSE265801 |
Single cell atlas of the human retina |
| GSE265961 |
Gene expression profiles at single cell level of nucleotides optimized WT or S449A PTPN22 in J.Lck WT or J.Lck Y192F Jurkat cells |
| GSE266161 |
RoCK and ROI: a single-cell RNA-sequencing method with enhanced transcriptome information via targeted enrichment of transcripts and preselected, region-specific sequencing |
| GSE267826 |
MIRO2-mediated mitochondrial transfer from cancer cells induces cancer-associated fibroblast differentiation |
| GSE268054 |
Epstein-Barr virus protein EBNA-LP engages YY1 through [RNA-seq] leucine-rich motifs to promote naïve B cell transformation |
| GSE268155 |
Epigenomic signatures of sarcomatoid differentiation to guide the treatment of renal cell carcinoma |
| GSE268157 |
Mis-splicing derived neoantigens and cognate T cell receptors in splicing factor mutant leukemias |
| GSE268385 |
Induction of meiosis from human pluripotent stem cells |
| GSE268431 |
Cellular senescence in skeletal muscle aging: new mechanisms and therapeutic potential for sarcopenia [cut&run_seq_IMR90] |
| GSE268457 |
mRNAseq: Evidence of RNA polymerase III recruitment and transcription at protein-coding gene promoters |
| GSE268535 |
Tracking and mitigating imprint erasure during induction of naïve human pluripotency at single-cell resolution [RNA-Seq] |
| GSE268536 |
Tracking and mitigating imprint erasure during induction of naïve human pluripotency at single-cell resolution [Bisulfite-Seq] |
| GSE269037 |
Iterative deep learning-design of human enhancers exploits condensed sequence grammar to achieve cell type-specificity [scRNA-Seq] |
| GSE269071 |
Inhibition of CDK8/CDK19 with the small molecule inhibitor SEL120-34A in prostate cancer cell lines (3’ tag DGE) |
| GSE269073 |
Downregulation of MED12 via siRNA in SPHEROIDS derived from prostate cancer cell lines (3’ tag DGE) |
| GSE269121 |
CD22 modulation regulates neuroinflammation in microglia |
| GSE269768 |
3D Bioprinting Lobule-like Hepatorganoids with Induced Vascularization for Orthotopic Implantation |
| GSE269805 |
RNA-seq in parental and resistant non-small cell lung cancer (NSCLC) cells |
| GSE269949 |
Human hepatoma Huh-7 cell culture models deficient in apolipoprotein B secretion |
| GSE269968 |
Cancer-associated fibroblasts (CAFs) gene signatures predict outcomes in breast and prostate tumor patients |
| GSE269977 |
DNA methylation alterations of driver genes in blood of high-altitude pulmonary edema ( RRBS) |
| GSE270030 |
Targeting z-Crystallin by aspirin restores the sensitivity to cisplatin in resistant A2780 ovarian cancer cells |
| GSE270045 |
Upregulation of olfactory receptors and neuronal-associated genes highlights complex immune and neuronal dysregulation in Long COVID patients |
| GSE270167 |
Effects of the receptor-like protein tyrosine phosphatase PTPRH overexpression on gene expression in non-small cell lung cancer cell lines |
| GSE270178 |
Human tri-tissue organoids model neuromusculoskeletal development and disease [bulk RNA-Seq] |
| GSE270193 |
Analysis of mRNA profiling in sinonasal inverted papilloma |
| GSE270293 |
Rapid and efficient generation of human iPSC-derived lymphatic endothelial cells for functional assays |
| GSE270402 |
NCBP2 promotes colorectal cancer growth and metastasis by driving lipid droplet accumulation by stabilizing LIPG mRNA |
| GSE270425 |
High-Fidelity, Efficient Human Post-Implantation Embryo Models Generated by STAT3-Induced Cell Plasticity |
| GSE270431 |
Neutrophils recruited by NKX2-1 suppression via activation of CXCLs/CXCR2 axis promote lung adenocarcinoma progression |
| GSE270507 |
IRF1 cooperates with ISGF3 or GAF to form innate immune de novo enhancers |
| GSE270547 |
Mutant CEBPA promotes tolerance to inflammatory stress through deficient AP-1 activation [ChIP-seq] |
| GSE270550 |
Mutant CEBPA promotes tolerance to inflammatory stress through deficient AP-1 activation [RNA-Seq] |
| GSE270578 |
TFCP2L1 promotes GPX4-mediated ferroptosis to inhibit breast cancer cell proliferation and metastasis via the PI3K/AKT signaling pathway |
| GSE270829 |
Aberrant DNA methylation occurs in RUNX1 heterozygous mutations harboring hematopoietic progenitor cells [CUT&RUN] |
| GSE270902 |
Twist1-induced suppression of oncogene-induced senescence in non-small cell lung cancer requires the transactivation domain of Twist1 |
| GSE270992 |
Fast pH-Driven Solubilization Method of Realgar (As4S4) to Reduce the Toxicity of Arsenic [As(III)] for Medical Purposes |
| GSE271101 |
ETV2 Overexpression Promotes Efficient Differentiation of Pluripotent Stem Cells to Endothelial Cells |
| GSE271108 |
PRAME-mediated retinoid resistance in keratinocyte carcinomas is overcome by EZH2 inhibition |
| GSE271428 |
Engineering Scalable Vascularized Kidney Organoids for in vivo Glomerular Filtration with Human Endothelial Integration |
| GSE271629 |
Single Cell Minimal Residual Disease Analysis in Multiply Relapsed AML Patient |
| GSE271648 |
Macromolecular interactions dictate Polycomb-mediated epigenetic repression [RNA-seq] |
| GSE271728 |
Engineering covalent small molecule–RNA complexes in living cells |
| GSE271752 |
Macromolecular interactions dictate Polycomb-mediated epigenetic repression [ChIP-seq] |
| GSE272059 |
Elevated GRHL2 imparts plasticity in estrogen receptor positive breast cancer cells [ChIP-Seq] |
| GSE272118 |
Transposable element activity captures human pluripotent cell states [ATAC-seq] |
| GSE272186 |
Microglia-astrocyte interplay mitigates Aβ toxicity in a novel human 3D neurosphere model of Alzheimer’s Disease |
| GSE272196 |
Transposable element activity captures human pluripotent cell states. |
| GSE272495 |
Isolation and tracing of matrix-producing notochordal and chondrocyte cells using ACAN-2A-mScarlet reporter human iPSC lines |
| GSE272550 |
Effect of CDK12-IN-3 on uterine serous carcinoma cell line |
| GSE272892 |
Transcriptome data of HepaRG differentiation, de-differentiation, and re-differetiation. |
| GSE272958 |
EWS-FLI1 in embryonic hMSCs induces DNA damage and Ewing sarcoma tumorigenesis [Spatial_transcriptomics] |
| GSE272960 |
EWS-FLI1 Expression in Human Embryonic Mesenchymal Stem Cells Leads to Defective DNA Damage Repair and Ewing Sarcoma |
| GSE273061 |
Changes in 3D genome organization of hepatocellular carcinoma (HCC) cells induced by lipid overload |
| GSE273112 |
Newly identified ZNHIT3 variants, which cause intrauterine fetal loss, disrupt snoRNP assembly |
| GSE273149 |
Longitudinal transcriptomic analysis reveals persistent enrichment of iron homeostasis and erythrocyte function pathways in severe COVID-19 ARDS |
| GSE273164 |
Systematic evaluation of GAPs and GEFs identifies ARHGAP45 as a targetable leukemia-specific RhoGAP dependency |
| GSE273169 |
Pyrimidine Triones as Potential Activators of p53 Mutants |
| GSE273423 |
NKG2C and NKG2A coexpression defines a highly functional antiviral NK population in spontaneous HIV control |
| GSE273432 |
The roles of glioma-associated macrophages/microglia in human GBM |
| GSE273497 |
Neddylation Signaling Inactivation by Tetracaine Hydrochloride Suppresses Cell Proliferation and Vemurafenib-resistance of Melanoma |
| GSE273556 |
Fn14 antagonist L524-0366 exerts protective effect on fibroblasts |
| GSE273614 |
HIV-1 m6A methylome investigation by m6A-SAC-seq |
| GSE273678 |
Phase-separated NDF−FACT condensates facilitate transcription elongation on chromatin [ChIP-Seq] |
| GSE273679 |
Phase-separated NDF−FACT condensates facilitate transcription elongation on chromatin [CUT&Run] |
| GSE273680 |
Phase-separated NDF−FACT condensates facilitate transcription elongation on chromatin [PRO-Seq] |
| GSE273681 |
NDF-FACT phase separation condensates are required for RNA Polymerase II transcription elongation through chromatin [RNA-Seq] |
| GSE273772 |
Rapid Human Oogonia-like Cell Specification via Combinatorial Transcription Factor-Directed Differentiation [BiSulfite-seq] |
| GSE273775 |
Enhanced CLIP-Seq (eCLIP-Seq) of FLAG-tagged wild-type and mutant MYC in U2OS-MYC-KO-MYC-Tet-On cells |
| GSE273776 |
ChIP-Seq with reference exogenous genome (ChIP-Rx) of MAX in U2OS-MYC-KO-MYC-Tet-On cells with exogenous wild-type and mutant MYC expression |
| GSE273777 |
RNA-Seq of U2OS-MYC-KO-MYC-Tet-On cells with exogenous wild-type and mutant MYC expression |
| GSE273815 |
Melanoma plasticity is regulated by mTOR-mediated crosstalk between MITF and TFE3 |
| GSE273837 |
innate immune cell memory induced by endogenous and exogenous triggers |
| GSE274151 |
Epigenetically mediated drug resistance in myeloma is coordinated by a myeloma-associated long non-coding RNA PLUM [ChIP] |
| GSE274152 |
Epigenetically mediated drug resistance in myeloma is coordinated by a myeloma-associated long non-coding RNA PLUM |
| GSE274206 |
Interferon-dependent R-loop Induction by Zika Virus Contributes to Growth Attenuation [ZIKV_DENV_IFN_DRIPseq] |
| GSE274207 |
Interferon-dependent R-loop Induction by Zika Virus Contributes to Growth Attenuation [U251 DRIP-Seq] |
| GSE274208 |
Interferon-dependent R-loop Induction by Zika Virus Contributes to Growth Attenuation [ZIKV_Bruseq] |
| GSE274227 |
HaloPROTAC3 treatment activates the unfolded protein response of the endoplasmic reticulum in non-engineered mammalian cells |
| GSE274346 |
Next-generation breast organoids capture human organogenesis with high-resolution live imaging |
| GSE274590 |
Snord67 promotes breast cancer metastasis by guiding U6 modification and modulating the splicing landscape |
| GSE274841 |
p300 catalytic inhibition selectively targets IRF4 oncogenic activity in multiple myeloma (MM1S_KB528_timeseries) |
| GSE274843 |
p300 catalytic inhibition selectively targets IRF4 oncogenic activity in multiple myeloma (PBMC_KB528_timeseries) |
| GSE274845 |
p300 catalytic inhibition selectively targets IRF4 oncogenic activity in multiple myeloma (RPMI8226_KB528_timeseries) |
| GSE274846 |
p300 catalytic inhibition selectively targets IRF4 oncogenic activity in multiple myeloma (MM1S_SOC) |
| GSE275059 |
High-throughput mRNA-sequence of MCM7 and SHCBP1 knock down hepatocytes with IL-1β stimulation |
| GSE275060 |
Extrachromosomal DNA Associates with Nuclear Condensates and Reorganizes Chromatin Structures to Enhance Oncogenic Transcription |
| GSE275114 |
Therapy of allergic rhinitis using ribavirin spray to clear nasal commensal viruses |
| GSE275127 |
Induction of meiosis from human pluripotent stem cells [Bisulfite-seq] |
| GSE275154 |
The competition between splicing and 3′ processing shapes the human transcriptome |
| GSE275215 |
Productive mRNA chromatin escape is promoted by PRMT5 activity - Cytoplasm Nucleoplasm Chromatin Fractions |
| GSE275303 |
Identifying RARG fusions or PML-RARA binding genes or analysis the epigenetic changes (H3K27ac, H3K4me1, and H3K4me3) in hCD34+ cells overexpressing CPSF6::RARG and NUP98::RARG. |
| GSE275304 |
Analysis of the chromatin accessibility in CPSF6-RARG or NUP98-RARG overexpressing hCD34+ cells compared to control hCD34+ cells using ATAC-seq. |
| GSE275330 |
Doxorubicin resistance involves modulation of interferon signaling, transcriptional bursting, and gene co-expression patterns of U-ISGF3-related genes |
| GSE275505 |
IGF-1 Peptide Mimetic-functionalized Hydrogels Enhance MSC Survival and Immunomodulatory Activity |
| GSE275527 |
Effect of PDCD11 silencing on gene expression in MDA-MB-231 cells |
| GSE275571 |
Single-cell multiome uncovers differences in glycogen metabolism underlying species-specific speed of development [mTORi] |
| GSE275572 |
Single-cell multiome uncovers differences in glycogen metabolism underlying species-specific speed of development |
| GSE275598 |
Methylation profiling of plasma cell-free DNA in pediatric brain tumor patients |
| GSE275662 |
Effect of cisplatin on gene expression of human umbilical vein endothelial cells |
| GSE275667 |
Effect of cisplatin on gene expression of human microvascular endothelial cells |
| GSE275705 |
Extrachromosomal DNA Associates with Nuclear Condensates and Reorganizes Chromatin Structures to Enhance Oncogenic Transcription [RNA-seq II] |
| GSE275707 |
Extrachromosomal DNA Associates with Nuclear Condensates and Reorganizes Chromatin Structures to Enhance Oncogenic Transcription [CUT&TAG] |
| GSE275898 |
RPRD1B’s direct interaction with phosphorylated RNA Polymerase II regulates polyadenylation of cell cycle genes and drives cancer progression |
| GSE275928 |
CRISPR screening identifies regulators of enhancer mediated androgen receptor transcription in advanced prostate cancer (RNA-Seq) |
| GSE276016 |
Genetic variants affecting RNA stability influence complex traits and disease risk |
| GSE276052 |
CRISPR screening identifies regulators of enhancer mediated androgen receptor transcription in advanced prostate cancer |
| GSE276142 |
Consistent self-organized emergence of hyaline cartilage in hiPSC-derived multi-tissue organoids |
| GSE276176 |
Divergence from the human astrocyte developmental trajectory in glioblastoma [bulk RNA] |
| GSE276193 |
Integrative Single-Cell Analysis Reveals Iron Overload-Induced Senescence and Metabolic Reprogramming in Ovarian Endometriosis-Associated Infertility |
| GSE276210 |
Beta-Adrenergic Stimulation and MYH7 G256E Mutant Gene Dosage Drive Hypertrophic Cardiomyopathy Phenotype Penetrance |
| GSE276333 |
Novel function of NUP153 in HNF4α transcriptional upregulation contributes to promoting HBV replication |
| GSE276610 |
Effect of cigarette smoking on human tracheal epithelium |
| GSE276640 |
Next Generation Sequencing Facilitates Quantitative Analysis of Lactic acid Treated Human Treg cells Transcriptomes |
| GSE276645 |
The effection of celastrol treatment on SKM-1 cell |
| GSE276653 |
Next Generation Sequencing Facilitates Qunatitative Analysis of Lactic acid Treated CD8+ T cells Transcriptomes |
| GSE276663 |
High-dimensional analysis reveals increased chromatin heterogeneity and reduced histone acetylation driven by mutant-IDH1 [ATAC-seq] |
| GSE276718 |
Engineering mtDNA Deletions by Reconstituting End-Joining in Human Mitochondria [DOGMAseq] |
| GSE276962 |
GRB2 promotes malignant behaviors of breast cancer by modulating the global expression and alternative splicing profiles in SK-BR-3 cells through binding mRNA [RNA-seq] |
| GSE276963 |
GRB2 promotes malignant behaviors of breast cancer by modulating the global expression and alternative splicing profiles in SK-BR-3 cells through binding mRNA [fRIP-seq] |
| GSE276999 |
Three-dimensional genome structures of single mammalian sperm [scHi-C] |
| GSE277016 |
Three-dimensional genome structures of single mammalian sperm [GAM] |
| GSE277040 |
Three-dimensional genome structures of single mammalian sperm |
| GSE277096 |
Early cytokine and chemokine signals shape the anti-AML activity of bispecific engager-secreting T cells |
| GSE277128 |
Efficient suppression of premature termination codons with alanine by engineered chimeric pyrrolysine tRNAs |
| GSE277130 |
Efficient suppression of premature termination codons with alanine by engineered chimeric pyrrolysine tRNAs [Ribo-Seq] |
| GSE277163 |
Effect of 3D cultivation of human mesenchymal stomal cells to emulate the bone marrow niche microenvironment |
| GSE277326 |
Single-cell analysis of the epigenome and 3D chromatin architecture in the human retina [10x multiome] |
| GSE277353 |
Binding sites of ASCL1 and NEUROD1 in ASCL1/NEUROD1 double-positive cell lines |
| GSE277361 |
Single-cell analysis of the epigenome and 3D chromatin architecture in the human retina [snm3c-seq] |
| GSE277387 |
Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease |
| GSE277397 |
Mapping GATA2 Occupancy in Uterine Serous Carcinoma |
| GSE277414 |
Mapping snoRNA-target RNA interactions in an RNA binding protein-dependent manner with chimeric eCLIP [chimeric eCLIP] |
| GSE277416 |
Mapping snoRNA-target RNA interactions in an RNA binding protein-dependent manner with chimeric eCLIP [eCLIP] |
| GSE277476 |
Altered bone marrow myelopoiesis contributes to kidney injury [scRNA-seq] |
| GSE277565 |
RNA sequencing of human monocyte-derived dendritic cells stimulated with CLEC10A ligand glycodendrimers in the presence of Pam3CysK4 |
| GSE277630 |
Development of acquired resistance to sotorasib in NCI-H358 cell line in vitro |
| GSE277653 |
Effect of MEKi on NF1 pseudarthrosis primary cells |
| GSE277708 |
Transcriptional profiling of isolated T cells of healthy individuals after treatment with supernatant of peripheral blood mononuclear cells (PBMCs) of the same individuals treated overnight with soluble CD14 (sCD14) |
| GSE277711 |
Transcriptional profiling of T cells of healthy individuals after treatment with supernatant of PBMCs of the same individuals treated overnight with sCD14 with isolated T cells cultured in TH17 polarizing condition and T cells treated with GABA overnight |
| GSE277719 |
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation [Hi-C] |
| GSE277721 |
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation |
| GSE277845 |
RNA-seq analysis of differentially expressed genes between WT and siALDOA HT29 cells. |
| GSE277875 |
Interphase chromosome conformation is specified by distinct folding programs inherited via mitotic chromosomes or through the cytoplasm [Hi-C] |
| GSE278007 |
Spatial profiling of chromatin accessibility in formalin-fixed paraffin-embedded tissues |
| GSE278008 |
Transcriptomic analysis of NAFLD model cells with the co-administration of pseudo-natural flavonol and copper |
| GSE278023 |
Interphase chromosome conformation is specified by distinct folding programs inherited via mitotic chromosomes or through the cytoplasm |
| GSE278036 |
Vaginal transcriptional signatures of the neutrophil-driven immune response correlate with clinical severity during recurrent vulvovaginal candidiasis |
| GSE278089 |
THUMPD3 regulates alternative splicing of ECM transcripts in human lung cancer cells and promotes proliferation and migration |
| GSE278252 |
Co-profiling of in situ RNA-protein interactions and transcriptome in single cells and tissues [scMAPIT-seq] |
| GSE278288 |
Engineering Fibroblast with Reprogramming and Spheronization for Bone Defect Repair |
| GSE278343 |
Dickkopf-1 promotes tumor progression of gefitinib- resistant non-small cell lung cancer through cancer cell-fibroblast interactions |
| GSE278348 |
CEBPB drives endothelial pathological phenotype and promotes atherosclerosis by directly upregulating TGFBR1 expression [CUT&Tag-Seq] |
| GSE278418 |
Co-profiling of in situ RNA-protein interactions and transcriptome in single cells and tissues |
| GSE278573 |
A Meta-Atlas of the Developing Human Cortex Identifies Modules Driving Cell Subtype Specification [Chimeroid] |
| GSE278642 |
Growth signaling promotes H2A.Z deposition by SRCAP to sustain somatic tissue regeneration [ChIP-Seq] |
| GSE278773 |
Bruton's tyrosine kinase inhibitors rescue neuronal impairment caused by B cell-mediated lymphotoxin-α release |
| GSE278800 |
Controlling human stem cell-derived islet composition using magnetic sorting |
| GSE278958 |
Genome-wide DNA replication profiling and full-length total RNA sequencing from the same single cell [IMR-90 G1] |
| GSE278959 |
Genome-wide DNA replication profiling and full-length total RNA sequencing from the same single cell |
| GSE278968 |
Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [bulk RNA-Seq] |
| GSE279044 |
Comprehensive single-cell RNA-sequencing study of Tollip deficiency effect in IL-13-stimulated human airway epithelial cells |
| GSE279068 |
ZMYND11 Functions in Bimodal Regulation of Latent Genes and Brain-like Splicing to Safeguard Corticogenesis [CUT&RUN] |
| GSE279072 |
ZMYND11 Functions in Bimodal Regulation of Latent Genes and Brain-like Splicing to Safeguard Corticogenesis [RNA-seq] |
| GSE279087 |
Placental cytotrophoblast microvillar stabilization is required for cell-cell fusion |
| GSE279103 |
Bruton's tyrosine kinase inhibitors rescue neuronal impairment caused by B cell-mediated lymphotoxin-α release |
| GSE279127 |
Gene Expression is Co-regulated by Non-nucleolar RNA Polymerase I [RNA-seq] |
| GSE279134 |
MYC plus class IIa HDAC inhibiton potentiates mitochondrial dysfunction in non-small cell lung cancer [ATAC-seq] |
| GSE279160 |
Therapeutic benefits of maintaining CDK4/6 inhibitors and incorporating CDK2 inhibitors beyond progression in breast cancer |
| GSE279213 |
Targeting De Novo Cholesterol Synthesis as a Therapeutic Strategy in Rhabdomyosarcoma |
| GSE279228 |
Developmental exposure to perfluorooctanoic sulfonate(PFOS) impairs the endometrial receptivity |
| GSE279284 |
Systematic characterization of the composition and dynamics of processing body-associated mRNAs [dataset 2] |
| GSE279285 |
Systematic characterization of the composition and dynamics of processing body-associated mRNAs |
| GSE279443 |
ZNF207-YWHAZ Enhances Breast Cancer Proliferation and Chemotherapy Resistance by Activating the HIF-1alpha-PPARgamma-PKM2 Signaling Axis |
| GSE279580 |
Transcriptomic analysis of effects of cancer cell detachment after treatment with 2-deoxy-D-glucose alone or in co-treatment with metformin |
| GSE279647 |
Cell surface ribonucleoproteins cluster with heparan sulfate to regulate growth factor signaling |
| GSE279749 |
Combination of PARP and KRAS G12D Inhibitors Enhances Efficacy of Therapeutic Vulnerabilities |
| GSE279769 |
Individual G-quadruplex targeting with ligand-functionalized CRISPR-Cas9 uncovers transcriptional-dependent functional responses. |
| GSE279879 |
Ex vivo-generated human CD1c+ regulatory B cells by a chemically defined system suppress immune responses and alleviate graft-versus-host disease |
| GSE279930 |
STAU1 exhibits oncogenic characteristics and modulates alternative splicing and gene expression in A549 lung adenocarcinoma cells |
| GSE280391 |
Targeting CERT sensitizes AML Cells to FLT3 Inhibitors through activating GRP78-ATF6-CHOP Axis |
| GSE280483 |
Early NK-cell and T-cell dysfunction marks progression to severe dengue in patients with obesity and healthy weight |
| GSE280645 |
RNF26 promote the proliferation and metastasis of colorectal cancer cells via Wnt pathway |
| GSE280982 |
Single-cell sequencing across radiation treatment timepoints in head and neck cancer |
| GSE281407 |
RNA-Seq of nucleus pulposus cells with or without CircFUNDC1 overexpression |
| GSE281425 |
Chromosome engineering to correct a complex rearrangement on Chromosome 8 reveals the effects of 8p syndrome on gene expression and neural differentiation |
| GSE281526 |
Single-nuclei RNA-seq and ATAC-seq for Human Retina from Diverse Ancestry Backgrounds |
| GSE281646 |
A tri-specific antibody engages T and myeloid cells to augment anti-tumor immunity [TCE_scRNA-seq] |
| GSE281767 |
MYC plus class IIa HDAC inhibiton potentiates mitochondrial dysfunction in non-small cell lung cancer [I] |
| GSE281768 |
Glutathione enhances antitumor activity of NK cells via modulation of mitochondrial metabolism in acute leukemia patients |
| GSE281881 |
Proteomic study identifies Aurora-A mediated regulation of alternative splicing through multiple splicing factors |
| GSE281913 |
B cell-derived nociceptin/orphanin FQ contributes to impaired glucose tolerance and insulin resistance in obesity |
| GSE281935 |
RNA-seq analysis of resistant ER+ breast cancer cell lines |
| GSE282046 |
Single-cell RNA sequencing of human IL-18R supported CAR T cells targeting oncofetal Tenascin C |
| GSE282081 |
Deciphering CRC-Hepatocyte Interactions: A Multiomic Platform for Interrogation of Metabolic Crosstalk in the Liver-Tumor Microenvironment |
| GSE282112 |
Single-nucleus RNA sequencing of human periventricular white matter in vascular dementia [scRNA-Seq] |
| GSE282113 |
The RNA-binding protein PRRC2B preserves 5' TOP mRNA during starvation to maintain ribosome biogenesis during recovery |
| GSE282230 |
Single-cell RNA Sequencing Uncovers Molecular Mechanisms of Human Pancreatic Islet Dysfunction Under Overnutrition Metabolic Stress |
| GSE282245 |
Role of DDX3X in translation regulation in acute ER stress |
| GSE282356 |
Generation of Bona Fide Human Induced Trophoblast Stem Cells from Term Umbilical Cord |
| GSE282376 |
Sp140L Is a Herpesvirus Restriction Factor [Day8_WT_vs_LPKO_BulkRNAseq] |
| GSE282377 |
Sp140L Is a Herpesvirus Restriction Factor [Day5_LPKO_vs_SP100_SP140L_KO_BulkRNAseq] |
| GSE282454 |
Role of OCT4 as a transcription factor in pluripotent stem cells [ChIP-seq] |
| GSE282515 |
RNAseq of CD4 T cells treated with Insulin for 48 hours |
| GSE282517 |
RNAseq of CD4 T cells from 83 individuals with musculoskeletal compains |
| GSE282588 |
CHI-KAT8i5 suppresses ESCC tumor growth through inhibiting KAT8 mediate c-Myc stability |
| GSE282662 |
FOXL2 drives the differentiation of supporting gonadal cells in early ovarian development |
| GSE282676 |
High PRMT5 levels, maintained by KEAP1 inhibition, drive chemoresistance in ovarian cancer [ATAC-seq] |
| GSE282699 |
Interleukin-33 (IL-33) promotes DNA damage-resistance in lung cancer |
| GSE282705 |
BLU-222, a Potent CDK2 Inhibitor, Synergizes with CDK4/6 Inhibitors to Overcome Drug Resistance in HR–Positive and Triple-Negative Breast Cancer by Inducing p21 and p27 |
| GSE282806 |
A three-dimensional ex vivo model recapitulates in vivo features and unravels increased drug resistance in childhood acute lymphoblastic leukemia |
| GSE282838 |
Discrimination of initiator tRNA and start codon by mammalian mitochondrial initiation factor 3 in leaderless mRNA translation |
| GSE282928 |
Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease |
| GSE282952 |
Distinct endothelial pathomechanisms drive arterio-venous malformation in Alk1 or Smad4 loss-of-function conditions |
| GSE282984 |
Exploring the anti-influenza mechanism of erucic acid based on network pharmacology and transcriptomics |
| GSE283073 |
SUPER to Probe the Site-Specific DNA-Binding Protein Complex [bulkRNA-seq] |
| GSE283111 |
Regulatory mechanisms of the Hippo/YAP axis by G-protein coupled estrogen receptor in gastric signet-ring cell carcinoma |
| GSE283186 |
Axial Nephron Fate Switching Demonstrates a Plastic System Tunable on Demand |
| GSE283408 |
ExRNAcarrier_comp_small |
| GSE283546 |
KDM6A downregulation promotes tumor-prone cytokines expression in cancer-associated fibroblasts by activating enhancers |
| GSE283704 |
Af-CUT&Tag: A Sensitive and Antibody-Free Chromatin Profiling Method Using Genetically Encoded Tags and High-Affinity Binders Fused to Tn5 |
| GSE283705 |
Af-CUT&Tag: A Sensitive and Antibody-Free Chromatin Profiling Method Using Genetically Encoded Tags and High-Affinity Binders Fused to Tn5 |
| GSE283706 |
Af-CUT&Tag: A Sensitive and Antibody-Free Chromatin Profiling Method Using Genetically Encoded Tags and High-Affinity Binders Fused to Tn5 |
| GSE283756 |
Effect of over expression RGS6e forward and RGS6e Reverse on gene expression of SK-N-SH cells (Human neuroblastoma cell line) |
| GSE283760 |
OTTR-seq of FXTAS brain reveals tRNA ligase dysfunction |
| GSE283868 |
Axial Nephron Fate Switching Demonstrates a Plastic System Tunable on Demand [RNA-seq] |
| GSE283869 |
Protein kinase A regulates ferroptosis by controlling GPX4 m6A modification through phosphorylation of ALKBH5 |
| GSE283907 |
Changes of energy metabolism-related proteins before and after donor liver transplantation in patients with ischemia-reperfusion injury |
| GSE283908 |
Modeling aspects of human early post-implantation development with stem cells |
| GSE283978 |
Maf1 cooperates with progesterone receptors to repress RNA polymerase III transcription of select tRNAs |
| GSE284058 |
Histone H4 lysine 20 monomethylation is not a mark of transcriptional silencers |
| GSE284207 |
Joint single-cell profiling of Cas9 edits and transcriptomes reveals on- and off-target effects on gene expression (Superb-seq) |
| GSE284217 |
Bacterial immunotherapy leveraging IL-10R hysteresis for both phagocytosis evasion and tumor immunity revitalization [RNA-Seq] |
| GSE284342 |
Endoplasmic reticulum proteostasis in senescent cells is a vulnerability to senolytic vanadyl sulfate |
| GSE284372 |
NUDT21 lactylation reprograms alternative polyadenylation to promote cuproptosis resistance |
| GSE284403 |
Lactylated histone promotes rheumatoid arthritis progression by increasing NFATc2 expression and the production of anti-lactylated histone autoantibodies |
| GSE284431 |
Non-small cell lung cancer-associated Keap1 mutations lead to epigenetic reprogramming and tumorigenesis through CHD6 stabilization |
| GSE284491 |
Rapamycin Enhances CAR-T Control of HIV Replication and Reservoir Elimination in vivo |
| GSE284628 |
RNA-coupled CRISPR Screens Reveal ZNF207 as a Regulator of LMNA Aberrant Splicing in Progeria [CRASP-Seq] |
| GSE284629 |
RNA-coupled CRISPR Screens Reveal ZNF207 as a Regulator of LMNA Aberrant Splicing in Progeria [siZNF207_mRNA-Seq] |
| GSE284630 |
RNA-coupled CRISPR Screens Reveal ZNF207 as a Regulator of LMNA Aberrant Splicing in Progeria [siZNF207_Rescue_mRNA-Seq] |
| GSE284682 |
U1 snRNP regulates alternative promoter activity by inhibiting premature polyadenylation [TT-seq] |
| GSE284715 |
Injured epithelial cell states critically impact kidney allograft survival after T-cell-mediated rejection |
| GSE284720 |
RNA-seq analysis identifies the impact of different organic components of fine particulate matter (PM2.5) on human nasal fibroblasts |
| GSE284742 |
Injured epithelial cell states critically impact kidney allograft survival after T-cell-mediated rejection |
| GSE284796 |
Beneficial infections of the enterovirus genus in patients with liver cancer |
| GSE284839 |
USP7 inhibitors disrupt EBNA1 interactome and EBV tumorigenesis |
| GSE285028 |
Redox disruption using electroactive liposome coated gold nanoparticles for cancer therapy |
| GSE285126 |
Single-nuclei RNA-seq of neural organoids generated from wildtype and FNDC4 KO iPSCs |
| GSE285224 |
Identifying modifiers of seed-induced TDP-43 loss of function |
| GSE285272 |
Toxicity and absorption of polystyrene micro-nanoplastics in healthy and Crohn's disease human duodenum-chip models |
| GSE285312 |
RBPscan: A Quantitative, In Vivo Tool for Profiling RNA-Binding Protein Interactions. |
| GSE285496 |
RBPscan: A Quantitative, In Vivo Tool for Profiling RNA-Binding Protein Interactions IV |
| GSE285734 |
Lactylated histone promotes rheumatoid arthritis progression by increasing NFATc2 expression and the production of anti-lactylated histone autoantibodies [II] |
| GSE285814 |
SIRPa ablation overcomes exhaustion and enhances the antibody- and CAR-mediated antitumor activities of iPSC-derived CAR Macrophages |
| GSE285817 |
Infection of LUVA mast cells with Salmonella Typhimurium wt and S.Tm ∆invG |
| GSE285915 |
Nuclear ANLN regulates transcription initiation related Pol II clustering and target gene expression [Cut & Tag] |
| GSE285916 |
Nuclear ANLN regulates transcription initiation related Pol II clustering and target gene expression [RNA-Seq] |
| GSE285943 |
A reference model for circulating hematopoietic stem cells with applications to diagnostics |
| GSE285951 |
T cell receptor sequencing of HNSCC patient and healthy donor peripheral blood |
| GSE286330 |
Histone H3 E50K remodels chromatin to confer oncogenic activity and support EMT phenotype [ATAC-Seq] |
| GSE286331 |
Histone H3 E50K remodels chromatin to confer oncogenic activity and support EMT phenotype [Cut & Tag] |
| GSE286336 |
Chronic stress-induced cholesterol metabolism abnormalities promote ESCC tumorigenesis and predict neoadjuvant therapy response [RNA-Seq] |
| GSE286410 |
Multi-modal Omics Analysis of a Paediatric Melanoma Highlights Mechanisms Underlying Treatment Resistance [Seq] |
| GSE286426 |
RNA sequestration regulates cell fate [RNA-Seq] |
| GSE286438 |
Epigallocatechin Gallate (EGCG) Modulates Senescent Endothelial Cell-Monocyte Communication in Age-Related Vascular Inflammation |
| GSE286439 |
Comparative profile of microtubule destabilizers, a microtubule stabilizer, and TNF-α in human pulmonary microvascular endothelial cells |
| GSE286441 |
Gene expression of combretastatin A4 on quiescent retinal pigment epithelial cells |
| GSE286442 |
Measuring the effect of pan-Rho inhibition on microtubule destabilization response |
| GSE286443 |
Measuring the effect of ROCK inhibition on microtubule destabilization response |
| GSE286514 |
Cytosolic transport of citrate protects pancreatic cancer from ferroptosis under nutrient stress. |
| GSE286561 |
Effects of p65 palmitoylation on gene expression when overexpressing vector or p65 WT or p65 2CS in p65 knockout 293A cells combined with TNFα treatment |
| GSE286568 |
Comparison of gene expression in HeLa cells after treatment with IFN-b, IFN-g, or VPgEMCV. |
| GSE286577 |
Cancer-associated snaR-A noncoding RNA interacts with core splicing machinery and disrupts processing of mRNA subpopulations II |
| GSE286688 |
Direct induction of meiosis from human iPSCs under defined conditions |
| GSE287078 |
Time- and Dose-Dependent Effects of Irradiation on Endothelial and Tumor Endothelial Cells: Transcriptional, Molecular, and Functional Changes Driving Activation In Vitro and In Vivo |
| GSE287113 |
Human Immuno-Lung Organoid Model to Study Macrophage-Mediated Lung Cell Senescence Upon SARS-CoV-2 Infection [snMultiomics] |
| GSE287114 |
Human Immuno-Lung Organoid Model to Study Macrophage-Mediated Lung Cell Senescence Upon SARS-CoV-2 Infection |
| GSE287132 |
DNA binding and mitotic phosphorylation protect polyglutamine proteins from assembly formation |
| GSE287300 |
Single cell compendium of the muscle microenvironment in peripheral artery disease reveals capillary endothelial heterogeneity and activation of resident macrophages |
| GSE287301 |
Single-cell RNA-sequencing of HNSCC-infiltrating T cells |
| GSE287429 |
Drug Repurposing Identifies Proteasome Inhibitors as Antiproliferative Agents Counteracting Inflammation-Driven Chemoresistance in Triple-Negative Breast Cancer Organoids |
| GSE287509 |
Propofol Differentially Modulates Neurodevelopmental Processes in Region-Specific Human Brain Organoids |
| GSE287574 |
Infection and herbicide exposure implicate c-Abl kinase in α-synuclein serine 129 phosphorylation |
| GSE287648 |
ComBO: A combined human bone and lympho-myeloid bone marrow organoid for pre-clinical modelling of haematopoietic disorders |
| GSE287658 |
Old World alphaviruses use distinct mechanisms to infect brain microvascular endothelial cells for neuroinvasion |
| GSE287673 |
Cell-free fat extract promotes cornea epithelial repair and restores neurodegeneration via an anti-inflammation pathway |
| GSE287775 |
Ablation of CD38 on Multiple Myeloma Cells Leads to an Aggressive Phenotype |
| GSE287835 |
Nucleus-localized S100A9 triggers senescence of human amnion fibroblasts as a heterochromatin buster at parturition - CUT&Tag |
| GSE287868 |
Transcriptomic footprinting following restoration of p53 sequence and function utilising Adenine Base Editing |
| GSE287906 |
Common and Distinct Circulating MicroRNAs Across Four Neurovascular Disorders |
| GSE287925 |
Disrupting the interaction between androgen receptor and its coregulator WDR77 delays the growth of treatment-resistant prostate cancer |
| GSE288075 |
Efficient DNA- and virus-free engineering of cellular transcriptomic states using dCas9 ribonucleoprotein (dRNP)-complexes |
| GSE288077 |
Metabolic dysfunction-associated steatotic liver disease may increase intrahepatic interferon gene signatures in patients with chronic hepatitis B |
| GSE288162 |
SPATIAL TRANSCRIPTOMICS IDENTIFY HOMOLOGOUS MECHANISMS IN THE PATHOPHYSIOLOGY OF HUMAN AND E4FAD MOUSE CEREBRAL MICROBLEEDS |
| GSE288165 |
Multi-Region Brain Organoid - Fusion Organoid with cerebral, Endothelial and Mid-Hindbrain Components |
| GSE288174 |
Longitudinal Gene Expression Changes in PTSD Following Sub-Anaesthetic Oral Ketamine Administration |
| GSE288189 |
B2M knockout for hypo-immunity alters the global profiles of membrane-proteins and cytokines and impairs therapeutic efficacy of human stem cells |
| GSE288207 |
Reduced JAG1 expression through miR-200 overexpression or Crispr-Cas mediated knockout impairs TNBC growth and metastasis. |
| GSE288399 |
Bulk RNAseq of differentiation timecourse of embryoid bodies |
| GSE288422 |
Rise in KRT17 sensitizes platinum-resistant ovarian cancer organoids to targeted therapies |
| GSE288477 |
Mutant CEBPA promotes tolerance to inflammatory stress through deficient AP-1 activation [ATAC-seq] |
| GSE288498 |
The Retinal Determination Gene Network can confer chemoresistant properties to AML [THP1_chip_rna] |
| GSE288669 |
CHD3 regulates BMP signalling response during cranial neural crest cell specification |
| GSE288758 |
Spatial dynamics of the tumor microenvironment associated with emerging resistance to targeted therapy in EGFR-mutated non–small cell lung cancer |
| GSE288771 |
Epigenetic Silencing of LTR12C family in OCI-AML3 |
| GSE288780 |
Promoter-centric gene regulation in drug-resistant cancer |
| GSE288861 |
Lucicebtide (ST101) effect on hPBMCs-derived M2-type macrophages. |
| GSE288910 |
RNA structure directs RNA partitioning and is actively disrupted inside stress granules to enable cellular recovery |
| GSE288919 |
Genome-wide CRISPR screen for comprehensive identification of human factors involved in alternative polyadenylation based on differential localization of CD47 protein |
| GSE289004 |
Mitochondrial calcium uniporter links acetyl-CoA metabolism and H3K27 acetylation to maintain glioblastoma stem cells [ChIP-Seq] |
| GSE289050 |
Coordinated Expression of Retained Introns and Poison Exons in Renal Cell Carcinoma |
| GSE289148 |
Pooled screening identifies combinatorial CAR signaling domains for next-generation CAR-M immunotherapies [RNA-Seq] |
| GSE289149 |
Pooled screening identifies combinatorial CAR signaling domains for next-generation CAR-M immunotherapies [scRNA-seq] |
| GSE289169 |
Targeting the RBM39-MEK5 axis synergizes with bortezomib to inhibit the malignant growth of multiple myeloma |
| GSE289201 |
Pooled screening identifies combinatorial CAR signaling domains for next-generation CAR-M immunotherapies [scCAR-seq] |
| GSE289202 |
Pooled screening identifies combinatorial CAR signaling domains for next-generation CAR-M immunotherapies |
| GSE289220 |
Pathogenic variants in TMEM184B cause a neurodevelopmental syndrome associated with alteration of metabolic signaling |
| GSE289383 |
IFITM3-MET interaction drives osimertinib resistance through AKT pathway activation in EGFR-mutant non–small cell lung cancer |
| GSE289483 |
Spatial transcriptomics of pulmonary pleomorphic carcinoma |
| GSE289565 |
CLU alleviates Alzheimer’s disease-relevant processes by modulating astrocyte reactivity and microglia-dependent synaptic density [scRNA-seq] |
| GSE289619 |
IFITM3-MET interaction drives osimertinib resistance through AKT pathway activation in EGFR-mutant non–small cell lung cancer II |
| GSE289804 |
The role and mechanism of hypoxia-induced SLC6A8 up-regulation in HCC progression |
| GSE289809 |
Exploration of common pathogenic genes between cerebral amyloid angiopathy and insomnia based on bioinformatics and experimental validation |
| GSE289829 |
Differentiation-induced reduction in functional diversity restricts the ability of cytomegalovirus-specific CD8 T cells to eliminate virus-infected cells |
| GSE289913 |
Transcriptome analysis of γδT cells with/without PERK knockdown |
| GSE289915 |
Comparing Transcriptomes of human Alpha Beta and Gamma Delta T cells |
| GSE289999 |
Human Stress Response Specificity through MAPK Bioresonance Selectivity |
| GSE290006 |
Reduced vaccine-induced germinal center outputs in inflammatory bowel disease patients treated with anti-TNF biologics |
| GSE290015 |
Amniotic Fluid Reduces Liver Fibrosis By Attenuating Hepatic Stellate Cell Activation |
| GSE290079 |
SARS-CoV-2 NSP14 Inhibitor Confers Potent Antiviral Efficacy and Reverses NSP14-triggered Host Cell Modulation |
| GSE290105 |
PRMT5-mediated SRSF1 methylation promotes virus-positive Merkel cell carcinoma tumorigenesis by increasing Tip60 exon inclusion [JNJvsDMSO_raw] |
| GSE290189 |
SHMT2 modulates the transcriptome and metabolism profiles to promote the tumor phenotypes of bladder cancer HT-1376 cells |
| GSE290292 |
Clonal Hematopoiesis Landscape in Frequent Blood Donors |
| GSE290392 |
Adipocytes-derived β-hydroxybutyrate confers the resistance of myeloma cells to metabolic stress |
| GSE290413 |
Effect of TIMP1 depletion on gene expression in MIA PaCa-2 cell line by CRISPR/Cas9-based targeting of exon 4 |
| GSE290442 |
Single cell transcriptomic analysis of nephron and UB lineages in recombinant hPSC-derived kidney organoids grown under various conditions. |
| GSE290462 |
Enhancer-associated LncRNA-ITGA2 promotes vascular smooth muscle remodeling by mediating ITGA2 promoter-enhancer interactions [CUT&TAG] |
| GSE290463 |
Enhancer-associated LncRNA-ITGA2 promotes vascular smooth muscle remodeling by mediating ITGA2 promoter-enhancer interactions [RNA-seq] |
| GSE290468 |
STAMP: Single-Cell Transcriptomics Analysis and Multimodal Profiling through Imaging |
| GSE290502 |
RIT1 drives lung oncogenic transformation and is an actionable target in lung adenocarcinoma [H2110] |
| GSE290503 |
RIT1 drives lung oncogenic transformation and is an actionable target in lung adenocarcinoma [PDX] |
| GSE290534 |
Integration of CRISPR-Cas9 Screens and Multi-Omics Profiling Reveals CHD7-ANGPT1 as a Novel Multi-Drug Resistance Axis in AML |
| GSE290609 |
PRMT5-mediated SRSF1 methylation promotes virus-positive Merkel cell carcinoma tumorigenesis by increasing Tip60 exon inclusion |
| GSE290640 |
Effect of knockdown of CCDC137 on gene expression in bladder carcinoma cell T24. |
| GSE290654 |
Cancer-Associated Fibroblasts Shape a High-Lactate Microenvironment to Drive Perineural Invasion in Pancreatic Cancer via Histone Lactylation |
| GSE290798 |
Multi-omics analysis unveiled fibroblast-mediated pathogenesis in male genital lichen sclerosus |
| GSE290841 |
FASTKD5 processes mitochondrial pre-mRNAs at non-canonical cleavage sites |
| GSE290879 |
Biphasic control of the B cell transcriptome by mTORC1 and GSK3 |
| GSE290894 |
Rewiring the fusion oncoprotein EWSR1::FLI1 in Ewing scarcoma with bivalent small molecules [ChIP-Seq] |
| GSE290897 |
Identification of key genes associated with circadian rhythm as potential diagnostic biomarkers for cytomegalovirus infection in very low birth weight infants |
| GSE290905 |
Transcription factor cooperativity at a GATA3 tandem DNA sequence determines oncogenic enhancer-mediated activation. |
| GSE290924 |
Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer |
| GSE290979 |
Targeted Antisense Oligonucleotide Treatment Rescues Developmental Alterations in Spinal Muscular Atrophy Organoids [bulk RNA-seq] |
| GSE291048 |
Role of ATF4 in regulation of kidney gene expressions, signaling pathways and functions [human RCC4] |
| GSE291049 |
Role of ATF4 in regulation of kidney gene expressions, signaling pathways and functions |
| GSE291058 |
Effect of CMA inhibitor on gene expression in A549 non-small cell lung cancer cells |
| GSE291172 |
High-Fidelity, Efficient Human Post-Implantation Embryo Models Generated by STAT3-Induced Cell Plasticity [WGBS] |
| GSE291174 |
High-Fidelity, Efficient Human Post-Implantation Embryo Models Generated by STAT3-Induced Cell Plasticity [ATAC-Seq] |
| GSE291195 |
Tracking tau and cellular responses in human iPSC-microglia from uptake to seedable secretion in extracellular vesicles |
| GSE291200 |
Topological velocity inference from spatial transcriptomic data |
| GSE291310 |
Metabolic regulation of Th2 cells by L-phenylalanine |
| GSE291362 |
IQGAP3 bridges matrix stiffness with cancer stem cell maintenance and radioresistance by stabilizing SOX2 |
| GSE291386 |
Chromatin accessibility profiling of HSPC-derived erythroblast differentiation [ATAC-seq] |
| GSE291593 |
The Exon Junction Complex coordinates the co-transcriptional inclusion of blocks of neighboring exons |
| GSE291700 |
Effect of a 1-week mind-body intervention retreat on exosome-derived miRNA for 21 healthy human participants |
| GSE291758 |
Comparison of 3' GEM-X and PIPseq V on human immune cells |
| GSE291768 |
KRIT1 heterozygous mutations are sufficient to induce a pathological phenotype in patient-derived iPSC models of Cerebral Cavernous Malformation |
| GSE291850 |
Ruxolitinib reduces macrophage pyroptosis in aplastic anaemia |
| GSE291905 |
Post-replicative initial expression of the cell fate regulator PAX6 during neuroectoderm formation [RNA-seq 2] |
| GSE291954 |
Inflammatory transcriptomic signatures in a human cellular NMOSD model reveal upregulation of NF-κB and IL6 pathways |
| GSE292074 |
Patterns of intra- and inter-tumor phenotypic heterogeneity in men with lethal prostate cancer [scRNA-seq] |
| GSE292101 |
Silencing mitochondrial gene expression in living cells |
| GSE292194 |
Patterns of intra- and inter-tumor phenotypic heterogeneity in men with lethal prostate cancer [scATAC-seq] |
| GSE292195 |
Patterns of intra- and inter-tumor phenotypic heterogeneity in men with lethal prostate cancer |
| GSE292298 |
Multi-omics Identifies Tumor-Intrinsic SREBP1 Driving Immune Exclusion in Hepatocellular Carcinoma |
| GSE292361 |
p53 drives epigenetic programs associated with luminal cell identity in breast cancer [ATAC-seq] |
| GSE292364 |
p53 regulates the expression of histone modifiers to restrict stemness and maintain differentiated luminal identity in breast cancer |
| GSE292426 |
Macropinocytosis and vascularization detrmine response to mTOR inhibitors in lung squamous cell carcinomas |
| GSE292455 |
ATF4:p52 Complex Activates Oncogenic Enhancers in Multiple Myeloma via p300/CBP Recruitment to Regulate BACH1 |
| GSE292513 |
Loss of NF2 drives malignant transformation of human pancreatic acinar cells and enhances cell fitness under nutrient deprivation and therapeutical stress [single_cell_RNAseq] |
| GSE292529 |
Uncovering gene regulatory differences between human and chimpanzee neural cells [CUT&Tag] |
| GSE292538 |
KRAS-Dependent Metabolic Reprogramming of Endothelial Cells as a Therapeutic Vulnerability in Brain Arteriovenous Malformations |
| GSE292544 |
ABHD11 mediated deglutarylation regulates the TCA cycle and T cell metabolism |
| GSE292575 |
Lentiviral Vectors for Hematopoietic Stem Cell Gene Therapy Restore α-Globin Expression in α-Thalassemia Red Blood Cells |
| GSE292612 |
Genome-wide flow sorting CRISPRi screen identify PTGES3 as a novel therapeutic target of AR |
| GSE292688 |
Uncovering gene regulatory differences between human and chimpanzee neural cells [RNA-seq] |
| GSE292760 |
High-Throughput Drug Discovery for a Rare Neurological Disorder: Uncovering a Novel Therapeutic Opportunity for the 19q12 Autism Spectrum Disorder [post treatment entrectinib patient data] |
| GSE292792 |
Designed NGF mimetics with reduced nociceptive signatures in neurons |
| GSE292848 |
Distinct Roles of IL-4, IL-13, and IL-22 in Human Skin Barrier Dysfunction and Atopic Dermatitis |
| GSE292981 |
Single-Cell Transcriptome Profiling of PBMCs in Response to Diverse Immune Adjuvant Stimuli |
| GSE293003 |
Hepatocyte FoxO1 depletion exacerbates hepatic inflammation in MASH |
| GSE293013 |
Single-Cell Exon Deletion Profiling Reveals Splicing Events That Shape Gene Expression and Cell State Dynamics [scRNA-seq] |
| GSE293036 |
Genome-wide discovery of multiple sclerosis genetic risk variant allelic regulatory activity |
| GSE293278 |
ADAR1 regulates dsRNA formation in nuclear and mitochondrial transcripts through editing-dependent and -independent mechanisms |
| GSE293534 |
LEADR ncRNA dampens interferon signalling in bladder cancer |
| GSE293553 |
RNA-seq of ESCC Cells Overexpressed TFAP2β or its LLPS-deficient Mutants |
| GSE293656 |
Phosphodiesterase 12 facilitates the growth and metastatic capabilities of gastric cancer cells by activating the TCAF2/JAK2/STAT3 axis |
| GSE293734 |
Master TFs in LUSC |
| GSE293756 |
PANCREATIC DUCTAL ADENOCARCINOMAS RESISTANT TO KRAS INHIBITION ARE DRUGGABLE WITH AN ANTI-MUC1-C ADC |
| GSE293813 |
PITX2 dosage-dependent pacemaker cell state changes underlie sinus node dysfunction and atrial arrhythmia-susceptibility |
| GSE293821 |
SALL4 recruits BAF to activate enhancers required for cranial neural crest cell specification |
| GSE293884 |
Isoform-Specific Gene Regulation by Progesterone Receptors Drives Divergent Phenotypes in Breast Cancer Cells [CUT&Run] |
| GSE293885 |
Isoform-Specific Gene Regulation by Progesterone Receptors Drives Divergent Phenotypes in Breast Cancer Cells [RNA-Seq] |
| GSE294029 |
Distinct microRNA signatures define sporadic PSP-RS and PD in patient-derived midbrain organoids |
| GSE294154 |
Exosomal Non-Coding RNAs Drives Multiple Myeloma Progression |
| GSE294186 |
Changes in H3K27me3 in Tatton-Brown-Rahman Syndrome Neuronal Progenitor Cells |
| GSE294189 |
Transcriptomic changes in Tatton-Brown-Rahman Syndrome models of neuronal development |
| GSE294241 |
T-cell dysfunction during blinatumomab therapy in pediatric acute lymphoblastic leukemia |
| GSE294244 |
The promising miRNAs, Let-7b-5p and miR-24-3p, have the potential to serve as therapeutic agents targeting pancreatic cancer stem cells.[RNA-Seq] |
| GSE294276 |
Microbial Bile acid metabolite, 3-oxo-LCA, prohibits colorectal cancer progression |
| GSE294291 |
Single Cell Transcriptomics of human carotid artery plaques V2 |
| GSE294397 |
Effect of depletion of CNOT4 on gene transcription in human cells. |
| GSE294470 |
NSUN2 Facilitates Dicer Cleavage of DNA Damage-Associated R-Loops to Promote Repair [ChIP-Seq] |
| GSE294597 |
NELF coordinates Pol II transcription termination and DNA replication |
| GSE294621 |
Vascular-type heterogeneity is associated with differential gene expression profiles of endothelial cells under shear stress |
| GSE294656 |
Dysregulation of protein homeostasis by mutant UBA1 in VEXAS syndrome [WES] |
| GSE294791 |
ANTXR2 Deficiency Promotes Cellular Senescence and Chondroid Differentiation in Hyaline Fibromatosis Syndrome Fibroblasts |
| GSE294840 |
Gene expression profiling of triple-negative breast cancer cells by Nitidine Chloride(NCD) |
| GSE294981 |
MUC1-C IS ESSENTIAL FOR INFLAMMATORY MEMORY OF TYROSINE KINASE INHIBITOR RESISTANCE IN NSCLC CELLS |
| GSE295067 |
Lysine Pyruvylation Mediated by HAT1/p300-SIRT3 Couples Glycolytic Flux to Epigenetic Regulation |
| GSE295071 |
Transcriptomic analyses of normal human pancreatic acinar cells |
| GSE295083 |
Dynamic Multi-omics Profiling Unveils Bimodal Epigenetic Roles of Chromatin O-GlcNAc modification in Premature Senescence Program [RNA-seq] |
| GSE295121 |
VGLL1 contributes to both the transcriptome and epigenome of the developing trophoblast compartment [ATAC-Seq] |
| GSE295124 |
VGLL1 contributes to both the transcriptome and epigenome of the developing trophoblast compartment [ChIP-Seq] |
| GSE295225 |
Transcriptomic changes in human SCC-25 Parental and RARG knockout cells in response to 6h and 48h treatments with RARγ agonists CD1530 or all-trans retinoic acid (RA). |
| GSE295262 |
KCTD10 is a sensor for co-directional transcription-replication conflicts |
| GSE295330 |
Astrocyte induction of disease-associated microglia is suppressed by acute exposure to fAD neurons in human iPSC triple cultures |
| GSE295421 |
Enhancing RNA base editing on mammalian transcripts with small nuclear RNAs |
| GSE295441 |
Macrovascular infiltration and spikes in circulating tumor cells in cancer patients approaching end of life |
| GSE295522 |
Pexophagy-driven redox imbalance promotes virus-induced ferroptosis |
| GSE295623 |
First Generation Tools for the Modeling of Capicua-Family Fusion Oncoprotein-Driven Cancers (May 2024 Dataset) |
| GSE295625 |
First Generation Tools for the Modeling of Capicua-Family Fusion Oncoprotein-Driven Cancers (February 2025 Dataset) |
| GSE295647 |
Catalytic inhibition of KAT6/KAT7 enhances the efficacy and overcomes primary and acquired resistance to Menin inhibitors in acute myeloid leukaemia [human RNA-seq] |
| GSE295649 |
In vivo CRISPRi screen reveals lncRNA portfolio crucial for cutaneous squamous cell carcinoma tumor growth [RNASeq_knockdown] |
| GSE295889 |
Comparison of human pluripotent stem cell-derived cardiomyocyte subtypes |
| GSE295918 |
TREM2+ Macrophage Infiltration Underlies Breast Cancer Lung Metastasis due to Paclitaxel Treatment [ATAC-seq] |
| GSE296195 |
Anti-Leukemic Effects of Velcrin in SLFN12-Expressing Acute Myeloid Leukemia |
| GSE296212 |
LINE-1 locus transcription nucleates oncogenic chromatin architecture [RNA-Seq] |
| GSE296213 |
LINE-1 locus transcription nucleates oncogenic chromatin architecture |
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