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Series GSE255603 Query DataSets for GSE255603
Status Public on Dec 14, 2025
Title Function and mechanism of PAPOLA-mediated poly(A) lengthening in leukemia [RIP-Seq]
Organism Homo sapiens
Experiment type Other
Summary The polyadenylation of mRNA is pivotal for mRNA stability and efficient mRNA translation. The length of poly(A) tail is dynamically changed under various physiological conditions; however, the functions and mechanisms of aberrant poly(A) length control in cancers remain poorly understood. Here we uncovered the aberrant lengthening of poly(A) tail and particularly upregulated expression of poly(A) polymerase alpha (PAPOLA) in acute myeloid leukemia (AML), and the elevated PAPOLA expression significantly correlated with unfavorable AML outcomes. We further demonstrated the critical oncogenic functions of PAPOLA-mediated poly(A) lengthening in promoting AML leukemogenesis and leukemia stem cell self-renewal using human primary AML samples, AML cells and various mouse leukemogenesis models. Mechanistically, we identified GSTM2 as a key downstream target of PAPOLA that regulated metabolic reprogramming through the HNE-DLD axis to promote AML initiation and progression. Moreover, PAPOLA inhibitor cordycepin effectively blocked metabolic reprogramming and AML leukemogenesis in vivo. Overall, our study uncovers the novel functional link between aberrant poly(A) lengthening and cellular metabolic reprogramming in AML, and provides a molecular basis for development of an effective therapeutic strategy for AML patients.
 
Overall design RNA immunoprecipitation sequencing (RIP-seq) was used to detect RNA interactions with PAPOLA protein in AML cells.
 
Contributor(s) Guo S, Lin S
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Submission date Feb 12, 2024
Last update date Dec 14, 2025
Contact name Siyao Guo
E-mail(s) guosy6@mail2.sysu.edu.cn
Organization name The First Affiliated Hospital, Sun Yat-sen University
Street address No.58 Zhongshan Er Road
City Guangzhou
ZIP/Postal code 510080
Country China
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (2)
GSM8075895 shNS
GSM8075896 shPAPOLA
This SubSeries is part of SuperSeries:
GSE255668 Function and mechanism of PAPOLA-mediated poly(A) lengthening in leukemia
Relations
BioProject PRJNA1075759

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE255603_RIP-seq_fpkm.txt.gz 172.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA

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