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Series GSE257747 Query DataSets for GSE257747
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR693VPE)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq of transgenic worms expressing UNC-86-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR693VPE/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 25, 2024
Last update date Sep 02, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
Samples (2)
GSM8108469 TF ChIP-seq from whole organism (ENCLB712WLP)
GSM8108470 TF ChIP-seq from whole organism (ENCLB657OCR)
Relations
Reanalyzed by GSE276166

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE257747_ENCFF033MJE_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE257747_ENCFF107WLG_signal_of_unique_reads_ce10.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257747_ENCFF129WTS_peaks_and_background_as_input_for_IDR_ce11.bigBed 605.9 Kb (ftp)(http) BIGBED
GSE257747_ENCFF245CGI_optimal_IDR_thresholded_peaks_ce11.bed.gz 17.6 Kb (ftp)(http) BED
GSE257747_ENCFF287LPS_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE257747_ENCFF330KLX_read-depth_normalized_signal_ce10.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257747_ENCFF361ROR_optimal_IDR_thresholded_peaks_ce11.bigBed 63.9 Kb (ftp)(http) BIGBED
GSE257747_ENCFF488KUY_signal_of_unique_reads_ce11.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257747_ENCFF491HTC_peaks_and_background_as_input_for_IDR_ce11.bed.gz 326.3 Kb (ftp)(http) BED
GSE257747_ENCFF495TBP_optimal_IDR_thresholded_peaks_ce10.bigBed 63.8 Kb (ftp)(http) BIGBED
GSE257747_ENCFF595CQW_peaks_and_background_as_input_for_IDR_ce10.bigBed 608.0 Kb (ftp)(http) BIGBED
GSE257747_ENCFF875TOC_read-depth_normalized_signal_ce11.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257747_ENCFF909HAF_optimal_IDR_thresholded_peaks_ce10.bed.gz 17.6 Kb (ftp)(http) BED
GSE257747_ENCFF987BOE_peaks_and_background_as_input_for_IDR_ce10.bed.gz 327.4 Kb (ftp)(http) BED
GSE257747_RAW.tar 120.5 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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