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Series GSE279049 Query DataSets for GSE279049
Status Public on Sep 29, 2025
Title A Murine Model of Glioblastoma Initiating Cells and Human Brain Organoid Xenograft for Photodynamic Therapy Testing
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary Despite decades of research, brain tumours remain among the deadliest of all forms of cancer. As recurrence in glioblastoma is locally generated around the resection cavity, the ability of these tumours to resist almost all conventional and novel treatments relates, in part, to the unique cell-intrinsic and microenvironmental properties of neural tissues. Photodynamic therapy (PDT) relies on photo-toxic effects induced by specific molecules (photosensitisers) upon absorption of photons from a light source. Such toxic effects are not specific to a particular molecular fingerprint of GBM, but rather depend on selective accumulation of the photosensitiser inside tumour cells and their sensitivity to the effects, triggered by light. Here we report four new GICs obtained in Hospital Clinic Barcelona, HCB-GICs, to optimize preclinical studies of PDT, and to explore neoadjuvant protocols for a more effective PDT and photodiagnostic visualization. HCB-GIC cells express the known “stemness” markers Nestin and SOX2, Vimentin and CD44, contributing to invasiveness and to infiltrative ability within brain organoids, properties associated also to mesenchymal phenotype. HCB-GICs are susceptible to be treated with PDT, since the burden of cells into organoids decreased while increased cell death after irradiation. Moreover, we optimize an experimental in vivo model, able to assess the antitumoral effect of 5-ALA mediated PDT in engraftments of HCB-GICs co-cultures on the kidneys of high immunosupressed mice. In conclusion, we suggest that PDT might be an effective therapy to kill GICs with heterogeneous molecular fingerprint that achieve high levels of PPIX accumulation in tumor niche.
 
Overall design Comparison of HCB-GICs (glioblastoma initiating cells) obtained by primary culture of GB biopsies and their original tumor (4 samples)
 
Contributor(s) Sierra A, Mallo M
Citation(s) 41009470
Submission date Oct 08, 2024
Last update date Jan 15, 2026
Contact name Mar Mallo
Organization name Josep Carreras Leukaemia Research Institute
Street address Ctra de Can Ruti, s/n, camí de les escoles. Edifici IMPPC
City Badalona
ZIP/Postal code 08916
Country Spain
 
Platforms (1)
GPL21558 [OncoScan_CNV] Affymetrix OncoScan CNV FFPE Assay
Samples (16)
GSM8560115 Tumor 1 channel A
GSM8560116 Tumor 1 channel C
GSM8560117 GIC from tumor 1 channel A
Relations
BioProject PRJNA1170254

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE279049_OSCHP_files.tar.gz 124.7 Mb (ftp)(http) TAR
GSE279049_RAW.tar 74.0 Mb (http)(custom) TAR (of CEL)

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