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Series GSE287993 Query DataSets for GSE287993
Status Public on Feb 10, 2025
Title Impact of human anti-O-specific polysaccharide (OSP) antibody on Vibrio cholerae O1 in complex media containing mucin
Organism Vibrio cholerae C6706
Experiment type Expression profiling by high throughput sequencing
Summary Antibodies targeting the O-specific polysaccharide (OSP) of Vibrio cholerae O1 are a main determinant of protection against cholera. These antibodies can agglutinate bacteria, and can also directly inhibit V. cholerae motility, including at sub-agglutinating conditions. In order to evaluate for possible additional impacts of OSP-specific antibody on V. cholerae, we assessed the transcriptional profile of V. cholerae exposed to an anti-OSP human monoclonal antibody (G1), including in the presence of mucin, the principal component of intestinal mucous. We identified a subset of genes whose expression was significantly altered in the presence of anti-OSP antibody and mucin, including those involved in V. cholerae metabolism, transport, stress response, biofilm formation, motility, and secondary messenger signaling. Our results suggest a broad impact of anti-OSP antibodies on V. cholerae in the presence of mucin and identify several possible mechanisms by which anti-OSP antibodies might protect against cholera.
 
Overall design Vibrio cholerae C6706 bacteria cultured under toxin-inducing conditions were diluted to a subagglutinating optical density (600 nm) of ≤0.1 and exposed to two concentrations (0.0125 µM and 0.125 µM) of human monoclonal immunoglobulin (Ig) G1 targeting V. cholerae O-specific polysaccharide component of LPS (clone G1 - CF21.2.G01) or anti-flagellin antibody as a control (clone B12 -AT11.1.B12) in either Luria Bertani (LB) broth or LB containing 1% w/v porcine stomach mucin (LBM).
 
Contributor(s) Ryan ET, Verma S
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Submission date Jan 24, 2025
Last update date Feb 10, 2025
Contact name Smriti Verma
E-mail(s) SVERMA5@mgh.harvard.edu
Organization name Massachusetts General Hospital
Department Department of Infectious Diseases
Lab Edward T Ryan Lab
Street address 55 Fruit Street
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platforms (1)
GPL35328 NextSeq 2000 (Vibrio cholerae C6706)
Samples (20)
GSM8756953 1h/LB-rep1, SVb3-2
GSM8756954 1h/LB-rep2, SVb3-3
GSM8756955 1h/LB_G1_x-rep1, SVb3-5
Relations
BioProject PRJNA1215427

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE287993_RAW.tar 1.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA

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