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Series GSE308896 Query DataSets for GSE308896
Status Public on Dec 14, 2025
Title Cancer cells transfer invasive properties through microRNAs contained in collagen-tracks
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Invasion is a prerequisite for metastasis formation. During tumor development, type I collagen overexpression increases tumor microenvironment stiffness, facilitating cancer cell dissemination. During breast cancer cell migration in 2D and 3D matrices, we observed membrane debris left behind, attached to the collagen fibrils, along the migration path. We named these structures collagen-tracks. Their formation is stimulated by the interaction between the extracellular matrix (ECM) and matrix receptors, such as the discoidin-domain receptor 1 (DDR1). They present a specific nucleic acid and protein contents. When deposited by highly invasive breast cancer cells, internalized collagen-tracks reprogram non-invasive cells into highly pro-metastatic ones by inducing a partial epithelial–mesenchymal transition (EMT) associated with an increase in ECM degradation and cell invasiveness. This cell reprogramming is dependent on specific miRNAs identified in the collagen-tracks. Collagen-tracks thus represent a new form of cell-cell communication important for driving tumor invasion that could be targeted to prevent metastasis.
 
Overall design RNA-seq profiling of MCF7 (WT) on collagen and MCF7 with collagen-tracks on collagen after 72H
Web link https://www.cell.com/cell-reports/fulltext/S2211-1247(25)01497-4
 
Contributor(s) Saltel F, Rouyer L, Normand L, Richard E, Allain N, Giraud J, Di-Tommaso S, Raymond A, Dourthe C, Dupuy J, Moreau K, Iggo R, Dugot-Senant N, MacGrogan G, Bouter A, Tan S, Favereaux A, Moreau V, Luco R, Ros M
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Submission date Sep 23, 2025
Last update date Dec 14, 2025
Contact name Kevin MOREAU
E-mail(s) kevinmoreau001@gmail.com
Organization name CNRS
Street address Rue Henri Becquerel – CS 90030
City Orsay
ZIP/Postal code 91401
Country France
 
Platforms (1)
GPL34281 Illumina NovaSeq X (Homo sapiens)
Samples (6)
GSM9255239 MCF7 N1
GSM9255240 MCF7 ColTracks N1
GSM9255241 MCF7 N2
Relations
BioProject PRJNA1333344

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Supplementary file Size Download File type/resource
GSE308896_tablecounts_raw.csv.gz 538.9 Kb (ftp)(http) CSV
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Raw data are available in SRA

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