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Series GSE312054 Query DataSets for GSE312054
Status Public on Dec 14, 2025
Title Fat mass and obesity-associated (FTO)/SOCS6-m⁶A axis epigenetic modification links obesity to atopic dermatitis by regulating keratinocyte function
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Atopic dermatitis is one of the severe skin diseases. Keratinocytes, as the epidermal barrier cells, are an important component for maintaining the skin barrier function. In this dataset, we have included the m⁶A methylation RNA data obtained from normal human keratinocytes (N group) and keratinocytes from patients with atopic dermatitis (AD group).
 
Overall design We generated the following comparisons using Fold-change (FC) ≥ 1.5 or ≤ 0.5, and p < 0.05 were used to identify the differentially m6A methylated RNAs.The total RNAs were immunoprecipitated with anti-N6-methyadenosine (m6A) antibody. The modified RNAs were eluted from the immunoprecipitated magnetic beads as the “IP”. The unmodified RNAs were recovered from the supernatant as “Sup”. Two channel arrays were used for these samples but the data were analyzed as single-channel so that each sample represents either IP or supernatent and the sample table includes the normalized signal values.
 
Contributor(s) Xiao F, Zeng J
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Submission date Dec 01, 2025
Last update date Dec 15, 2025
Contact name Zeng Jinrong
E-mail(s) zengjinrong1989@csu.edu.cn
Organization name the Third Xiangya Hospital, Central South University
Street address No.138 Tongzipo Rd, Yuelu District, Changsha, Hunan, China, 410013
City Changsha
ZIP/Postal code 410013
Country China
 
Platforms (1)
GPL25759 Agilent-085753 Arraystar Human Epitranscriptomic microarray
Samples (6)
GSM9336967 Atopic dermatitis keratinocytes_rep1
GSM9336968 Atopic dermatitis keratinocytes_rep2
GSM9336969 Atopic dermatitis keratinocytes_rep3
Relations
BioProject PRJNA1372119

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE312054_RAW.tar 35.7 Mb (http)(custom) TAR (of TXT)
GSE312054_processed_data.txt.gz 2.9 Mb (ftp)(http) TXT

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