NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE92819 Query DataSets for GSE92819
Status Public on Jan 10, 2017
Title Hi-C from A549 (ENCSR662QKG)
Project GGR
Organism Homo sapiens
Experiment type Other
Summary Hi-C on A549 cell line treated with 100 nM dexamethasone for 0 hours.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR662QKG/
 
Citation(s) 22955616
BioProject PRJNA356880
Submission date Dec 22, 2016
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (8)
GSM2437834 Hi-C from A549 (ENCLB998FJI)
GSM2437835 Hi-C from A549 (ENCLB817NEZ)
GSM2437836 Hi-C from A549 (ENCLB153XCQ)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE92819_ENCFF121YPY_chromatin_interactions_GRCh38.hic 2.7 Gb (ftp)(http) HIC
GSE92819_ENCFF513HKS_topologically_associated_domains_GRCh38.bedpe.gz 301.5 Kb (ftp)(http) BEDPE
GSE92819_ENCFF675SJE_chromatin_interactions_GRCh38.hic 3.7 Gb (ftp)(http) HIC
GSE92819_ENCFF740KVX_chromatin_interactions_GRCh38.hic 3.2 Gb (ftp)(http) HIC
GSE92819_ENCFF803ZOW_long_range_chromatin_interactions_GRCh38.tsv.gz 1.5 Mb (ftp)(http) TSV
GSE92819_ENCFF876LAW_chromatin_interactions_GRCh38.hic 3.9 Gb (ftp)(http) HIC
GSE92819_RAW.tar 20.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap