|
| Status |
Public on Mar 17, 2017 |
| Title |
Analysis of nonsense-mediated mRNA decay in daf-2 mutants |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
To exmine the role of nonsense-mediated mRNA decay process in the longevity regulation of daf-2 mutants, we sequenced transcriptomes from day 1 adult Caenorhabditis elegans: Bristol N2 (wild-type), and smg-2(qd101), daf-2(e1370) and smg-2(qd101); daf-2(e1370) mutants.
|
| |
|
| Overall design |
Determination of transcript levels in N2 (wild-type), smg-2(qd101), daf-2(e1370), and smg-2(qd101); daf-2(e1370) animals by using deep sequencing, in duplicate
|
| |
|
| Contributor(s) |
Lee SV, Son HG, Nam H, Ham S, Roh T |
| Citation(s) |
28276441 |
| |
| Submission date |
Jan 25, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Seung-Jae V Lee |
| E-mail(s) |
seungjaevlee@kaist.ac.kr
|
| Organization name |
KAIST
|
| Department |
Biological Sciences
|
| Lab |
Room 5216
|
| Street address |
291 Daehak-ro
|
| City |
Daejeon |
| ZIP/Postal code |
34141 |
| Country |
South Korea |
| |
|
| Platforms (1) |
| GPL18245 |
Illumina HiSeq 2500 (Caenorhabditis elegans) |
|
| Samples (8)
|
|
| Relations |
| BioProject |
PRJNA368736 |
| SRA |
SRP097783 |
Less...
More...