GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE96615
Query DataSets for GSE96615
Status
Public on Dec 17, 2018
Title
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
30643296
Submission date
Mar 14, 2017
Last update date
Oct 06, 2022
Contact name
Andrew P. Feinberg
Organization name
Johns Hopkins University School of Medicine
Street address
855 N. Wolfe St
City
Baltimore
State/province
MD
ZIP/Postal code
21205
Country
USA
Platforms (2)
GPL16791
Illumina HiSeq 2500 (Homo sapiens)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
Samples (114)
Less...
More...
GSM2536541
5248_BA24_neg (bisulfite-Seq)
GSM2536542
5248_BA24_pos (bisulfite-Seq)
GSM2536543
5248_BA9_neg (bisulfite-Seq)
GSM2536544
5248_BA9_pos (bisulfite-Seq)
GSM2536545
5248_HC_neg (bisulfite-Seq)
GSM2536546
5248_HC_pos (bisulfite-Seq)
GSM2536547
5248_NAcc_neg (bisulfite-Seq)
GSM2536548
5248_NAcc_pos (bisulfite-Seq)
GSM2536549
5284_BA24_pos (bisulfite-Seq)
GSM2536550
5284_BA9_neg (bisulfite-Seq)
GSM2536551
5284_BA9_pos (bisulfite-Seq)
GSM2536552
5284_HC_neg (bisulfite-Seq)
GSM2536553
5284_HC_pos (bisulfite-Seq)
GSM2536554
5284_NAcc_neg (bisulfite-Seq)
GSM2536555
5284_NAcc_pos (bisulfite-Seq)
GSM2536556
5552_BA24_neg (bisulfite-Seq)
GSM2536557
5552_BA9_neg (bisulfite-Seq)
GSM2536558
5552_BA9_pos (bisulfite-Seq)
GSM2536559
5552_HC_neg (bisulfite-Seq)
GSM2536560
5552_HC_pos (bisulfite-Seq)
GSM2536561
5552_NAcc_neg (bisulfite-Seq)
GSM2536562
5552_NAcc_pos (bisulfite-Seq)
GSM2536563
5569_BA24_neg (bisulfite-Seq)
GSM2536564
5569_BA24_pos (bisulfite-Seq)
GSM2536565
5569_BA9_neg (bisulfite-Seq)
GSM2536566
5569_BA9_pos (bisulfite-Seq)
GSM2536567
5569_HC_neg (bisulfite-Seq)
GSM2536568
5569_HC_pos (bisulfite-Seq)
GSM2536569
5569_NAcc_neg (bisulfite-Seq)
GSM2536570
5569_NAcc_pos (bisulfite-Seq)
GSM2536571
5570_BA24_pos (bisulfite-Seq)
GSM2536572
5570_BA9_neg (bisulfite-Seq)
GSM2536573
5570_BA9_pos (bisulfite-Seq)
GSM2536574
5570_HC_neg (bisulfite-Seq)
GSM2536575
5570_HC_pos (bisulfite-Seq)
GSM2536576
5570_NAcc_neg (bisulfite-Seq)
GSM2536577
5570_NAcc_pos (bisulfite-Seq)
GSM2536578
5628_BA24_neg (bisulfite-Seq)
GSM2536579
5628_BA24_pos (bisulfite-Seq)
GSM2536580
5628_BA9_neg (bisulfite-Seq)
GSM2536581
5628_BA9_pos (bisulfite-Seq)
GSM2536582
5628_HC_neg (bisulfite-Seq)
GSM2536583
5628_HC_pos (bisulfite-Seq)
GSM2536584
5628_NAcc_neg (bisulfite-Seq)
GSM2536585
5628_NAcc_pos (bisulfite-Seq)
GSM2536586
5085_NAcc (bisulfite-Seq)
GSM2536587
5086_BA9 (bisulfite-Seq)
GSM2536588
5086_NAcc (bisulfite-Seq)
GSM2536589
5248_BA9 (bisulfite-Seq)
GSM2536590
5248_HC (bisulfite-Seq)
GSM2536591
5250_BA24 (bisulfite-Seq)
GSM2536592
5250_BA9 (bisulfite-Seq)
GSM2536593
5250_NAcc (bisulfite-Seq)
GSM2536594
5284_HC (bisulfite-Seq)
GSM2536595
5284_NAcc (bisulfite-Seq)
GSM2536596
5358_BA9 (bisulfite-Seq)
GSM2536597
5358_NAcc (bisulfite-Seq)
GSM2536598
5404_NAcc (bisulfite-Seq)
GSM2536599
5404_BA24 (bisulfite-Seq)
GSM2536600
5540_BA9 (bisulfite-Seq)
GSM2536601
5552_BA24 (bisulfite-Seq)
GSM2536602
5552_BA9 (bisulfite-Seq)
GSM2536603
5552_HC (bisulfite-Seq)
GSM2536604
5569_BA9 (bisulfite-Seq)
GSM2536605
5569_HC (bisulfite-Seq)
GSM2536606
5570_BA24 (bisulfite-Seq)
GSM2536607
5570_BA9 (bisulfite-Seq)
GSM2536608
5570_HC (bisulfite-Seq)
GSM2536609
5628_BA24 (bisulfite-Seq)
GSM2536610
5628_BA9 (bisulfite-Seq)
GSM2536611
5628_HC (bisulfite-Seq)
GSM2536612
5628_NAcc (bisulfite-Seq)
GSM2536613
5540_BA9_neg (RNA-Seq)
GSM2536614
5540_BA9_pos (RNA-Seq)
GSM2536615
5540_NAcc_neg (RNA-Seq)
GSM2536616
5540_NAcc_pos (RNA-Seq)
GSM2536617
5456_BA9_neg (RNA-Seq)
GSM2536618
5456_BA9_pos (RNA-Seq)
GSM2536619
5456_NAcc_neg (RNA-Seq)
GSM2536620
5456_NAcc_pos (RNA-Seq)
GSM2536621
5343_BA9_neg (RNA-Seq)
GSM2536622
5343_BA9_pos (RNA-Seq)
GSM2536623
5343_NAcc_neg (RNA-Seq)
GSM2536624
5343_NAcc_pos (RNA-Seq)
GSM2536625
5358_BA9_pos (RNA-Seq)
GSM2536626
5358_NAcc_pos (RNA-Seq)
GSM2536627
5404_BA9_neg (RNA-Seq)
GSM2536628
5404_BA9_pos (RNA-Seq)
GSM2536629
5347_NAcc_neg (RNA-Seq)
GSM2536630
5347_NAcc_pos (RNA-Seq)
GSM2536631
5347_BA9_neg (RNA-Seq)
GSM2536632
5347_BA9_pos (RNA-Seq)
GSM2536633
5358_NAcc_neg (ATAC-Seq)
GSM2536634
5347_BA9_neg (ATAC-Seq)
GSM2536635
5358_BA9_neg (ATAC-Seq)
GSM2536636
5404_BA9_neg (ATAC-Seq)
GSM2536637
5347_NAcc_neg (ATAC-Seq)
GSM2536638
5358_NAcc_pos (ATAC-Seq)
GSM2536639
5347_BA9_pos (ATAC-Seq)
GSM2536640
5358_BA9_pos (ATAC-Seq)
GSM2536641
5404_BA9_pos (ATAC-Seq)
GSM2536642
5347_NAcc_pos (ATAC-Seq)
GSM2536643
5540_BA9_neg (ATAC-Seq)
GSM2536644
5540_BA9_pos (ATAC-Seq)
GSM2536645
5343_BA9_neg (ATAC-Seq)
GSM2536646
5343_BA9_pos (ATAC-Seq)
GSM2536647
5343_NAcc_neg (ATAC-Seq)
GSM2536648
5343_NAcc_pos (ATAC-Seq)
GSM2536649
5456_BA9_neg (ATAC-Seq)
GSM2536650
5456_BA9_pos (ATAC-Seq)
GSM2536651
5456_NAcc_neg (ATAC-Seq)
GSM2536652
5540_NAcc_neg (ATAC-Seq)
GSM2536653
5540_NAcc_pos (ATAC-Seq)
GSM2536654
5456_NAcc_pos (ATAC-Seq)
This SuperSeries is composed of the following SubSeries:
GSE96612
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [Bisulfite-Seq]
GSE96613
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq]
GSE96614
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [ATAC-Seq]
Relations
BioProject
PRJNA379173
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary data files not provided
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|