 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Dec 20, 2017 |
| Title |
Transcriptome analysis of normal human lung fibroblasts (NHLFs) following TBX4 knockdown. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
TBX4 is a transcription factor unique to lung fibroblasts and is associated with super-enhancer. RNA-sequencing analysis on NHLFs following TBX4 knockdown revealed a broad array of genes possibly regulated by TBX4.
|
| |
|
| Overall design |
NHLFs were transfected with siRNAs for TBX4, and RNA-sequencing was performed using Illumina HiSeq.
|
| |
|
| Contributor(s) |
Horie M, Miyashita N, Saito A, Nagase T |
| Citation(s) |
28971975 |
| |
| Submission date |
Mar 31, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Akira Saito |
| E-mail(s) |
asaitou-tky@umin.ac.jp
|
| Organization name |
Tokyo University
|
| Street address |
7-31-, Hongo, Bunkyo
|
| City |
Tokyo |
| ZIP/Postal code |
1130033 |
| Country |
Japan |
| |
|
| Platforms (1) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
|
| Samples (2) |
|
| Relations |
| BioProject |
PRJNA381149 |
| SRA |
SRP102811 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE97266_NHLF_siTBX4_vs_NHLF_siNC.xlsx.gz |
13.7 Mb |
(ftp)(http) |
XLSX |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
|
|
|
|
 |
