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GEO accession:
Series GSE97413
Query DataSets for GSE97413
Status
Public on Apr 01, 2020
Title
INO80 complex assembly is antagonized by PRC2.
Organism
Homo sapiens
Experiment type
Other
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Apr 05, 2017
Last update date
Apr 02, 2020
Contact name
Jesse Raab
E-mail(s)
jesse.r.raab@gmail.com
Organization name
University of North Carolina Chapel Hill
Department
Genetics
Street address
120 Mason Farm Rd
City
Chapel Hill
ZIP/Postal code
27599
Country
USA
Platforms (3)
GPL16791
Illumina HiSeq 2500 (Homo sapiens)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
Samples (57)
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More...
GSM2564061
ATACseq on NTG replicate A
GSM2564062
ATACseq on siINO80#1 replicate A
GSM2564063
ATACseq on siINO80#2 replicate A
GSM2564064
ATACseq on NTG replicate B
GSM2564065
ATACseq on siINO80#1 replicate B
GSM2564066
ATACseq on siINO80#2 replicate B
GSM2564067
ATACseq on NTG replicate C
GSM2564068
ATACseq on siINO80#1 replicate C
GSM2564069
ATACseq on siINO80#2 replicate C
GSM2564070
INO80_HepG2_A
GSM2564071
INO80_HepG2_B
GSM2564072
INO80_HepG2_C
GSM2564073
INO80_Huh7_A
GSM2564074
INO80_Huh7_B
GSM2564075
Input_HepG2_A
GSM2564076
Input_HepG2_B
GSM2564077
Input_Huh7_A
GSM2564078
Input_Huh7_B
GSM2564079
MCRS1_HepG2_A
GSM2564080
MCRS1_HepG2_B
GSM2564081
MCRS1_Huh7_A
GSM2564082
MCRS1_Huh7_B
GSM2564083
RUVBL1_HepG2_A
GSM2564084
RUVBL1_HepG2_B
GSM2564085
RUVBL2_HepG2_A
GSM2564086
RUVBL2_HepG2_B
GSM2564087
RUVBL2_Huh7_A
GSM2564088
RUVBL2_Huh7_B
GSM2564089
YY1_Huh7_A
GSM2564090
YY1_Huh7_B
GSM2564091
HepG2_DMSO_H3K27ac_1
GSM2564092
HepG2_DMSO_H3K27ac_2
GSM2564093
HepG2_DMSO_Input_1
GSM2564094
HepG2_DMSO_Input_2
GSM2564095
HepG2_EPZ_H3K27ac_1
GSM2564096
HepG2_EPZ_H3K27ac_2
GSM2564097
HepG2_EPZ_Input_1
GSM2564098
HepG2_EPZ_Input_2
GSM2564099
RNAseq on NTG replicate A
GSM2564100
RNAseq on siINO80#1 replicate A
GSM2564101
RNAseq on siINO80#2 replicate A
GSM2564102
RNAseq on NTG replicate B
GSM2564103
RNAseq on siINO80#1 replicate B
GSM2564104
RNAseq on siINO80#2 replicate B
GSM2564105
RNAseq on NTG replicate C
GSM2564106
RNAseq on siINO80#1 replicate C
GSM2564107
RNAseq on siINO80#2 replicate C
GSM2564108
RNAseq on DMSO treated siMCRS1 replicate A
GSM2564109
RNAseq on DMSO treated siMCRS1 replicate B
GSM2564110
RNAseq on DMSO treated siMCRS1 replicate C
GSM2564111
RNAseq on DMSO treated NTG replicate A
GSM2564112
RNAseq on DMSO treated NTG replicate C
GSM2564113
RNAseq on EPZ-6438 treated siMCRS1 replicate A
GSM2564114
RNAseq on EPZ-6438 treated siMCRS1 replicate B
GSM2564115
RNAseq on EPZ-6438 treated NTG replicate A
GSM2564116
RNAseq on EPZ-6438 treated NTG replicate B
GSM2564117
RNAseq on EPZ-6438 treated NTG replicate C
This SuperSeries is composed of the following SubSeries:
GSE97410
Effect of INO80 loss on open chromatin in HepG2 cells [ATAC-seq]
GSE97411
Genomic occupancy of the INO80 complex [ChIP-seq]
GSE97412
Expression analysis of INO80 complex in HepG2 liver cancer cells [RNA-seq]
Relations
BioProject
PRJNA381703
Download family
Format
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MINiML formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary file
Size
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File type/resource
GSE97413_RAW.tar
7.8 Gb
(http)
(custom)
TAR (of BW)
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