GSE26880[Accession] - GEO DataSets - NCBI

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Select item 2000268801.

PARP1- and CTCF-mediated interactions between active and repressed chromatin at the lamina promote oscillating transcription

(Submitter supplied) Transcriptionally active and inactive chromatin domains tend to segregate into separate sub-nuclear compartments to maintain stable expression patterns. However, we have uncovered here an inter-chromosomal network connecting active loci enriched in circadian genes to repressed lamina-associated domains (LADs). The interactome is regulated by PARP1 and its co-factor, CTCF, which not only mediate chromatin fiber interactions, but also promote the recruitment of circadian genes to the lamina. more...

Organism:: Homo sapiens

Type:: Other; Expression profiling by high throughput sequencing

Platforms:: GPL15520 GPL16791 GPL9115
23 Samples

Download data: TXT

Series

Accession:: GSE26880

ID:: 200026880

PubMed Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000167912.

Illumina HiSeq 2500 (Homo sapiens)

Organism:: Homo sapiens

11814 Series
336528 Samples

Platform

Accession:: GPL16791

ID:: 100016791

Select item 1000155203.

Illumina MiSeq (Homo sapiens)

Organism:: Homo sapiens

1124 Series
35832 Samples

Platform

Accession:: GPL15520

ID:: 100015520

Select item 1000091154.

Illumina Genome Analyzer II (Homo sapiens)

Organism:: Homo sapiens

753 Series
6113 Samples

Platform

Accession:: GPL9115

ID:: 100009115

Select item 3014363485.

Organism:: Homo sapiens

Source name:: HEB RNAse

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436348

ID:: 301436348

SRA Run Selector

Select item 3014363476.

Organism:: Homo sapiens

Source name:: HESC RNAse

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436347

ID:: 301436347

SRA Run Selector

Select item 3014363467.

HEB Protected 2

Organism:: Homo sapiens

Source name:: HEB Protected

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436346

ID:: 301436346

SRA Run Selector

Select item 3014363458.

HEB Protected PARG

Organism:: Homo sapiens

Source name:: HEB Protected PARG

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436345

ID:: 301436345

SRA Run Selector

Select item 3014363449.

HESC Protected PARG

Organism:: Homo sapiens

Source name:: HESC Protected PARG

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436344

ID:: 301436344

SRA Run Selector

Select item 30143634310.

HEB RNAse replicate 2

Organism:: Homo sapiens

Source name:: HEB RNAse

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436343

ID:: 301436343

SRA Run Selector

Select item 30143634211.

HEB RNAse replicate 1

Organism:: Homo sapiens

Source name:: HEB RNAse

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436342

ID:: 301436342

SRA Run Selector

Select item 30143634112.

HEB Protected 1

Organism:: Homo sapiens

Source name:: HEB Protected

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436341

ID:: 301436341

SRA Run Selector

Select item 30158822713.

HESC Protected Control VAT1L MiSeq

Organism:: Homo sapiens

Source name:: HESC Protected Control VAT1L MiSeq

Platform:: GPL15520
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1588227

ID:: 301588227

SRA Run Selector

Select item 30143634014.

HESC RNAse replicate 2

Organism:: Homo sapiens

Source name:: HESC RNAse

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436340

ID:: 301436340

SRA Run Selector

Select item 30158822615.

HEB Protected Control MiSeq

Organism:: Homo sapiens

Source name:: HEB Protected Control MiSeq

Platform:: GPL15520
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1588226

ID:: 301588226

SRA Run Selector

Select item 30143633916.

HESC RNAse replicate 1

Organism:: Homo sapiens

Source name:: HESC RNAse

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436339

ID:: 301436339

SRA Run Selector

Select item 30158822517.

HEB Protected PARG MiSeq

Organism:: Homo sapiens

Source name:: HEB Protected PARG MiSeq

Platform:: GPL15520
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1588225

ID:: 301588225

SRA Run Selector

Select item 30143633818.

HESC Protected replicate 2

Organism:: Homo sapiens

Source name:: HESC Protected

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436338

ID:: 301436338

SRA Run Selector

Select item 30158822419.

HESC Protected PARG MiSeq

Organism:: Homo sapiens

Source name:: HESC Protected PARG MiSeq

Platform:: GPL15520
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1588224

ID:: 301588224

SRA Run Selector

Select item 30143633720.

HESC Protected replicate 1

Organism:: Homo sapiens

Source name:: HESC Protected

Platform:: GPL9115
Series:: GSE26880

Download data: TXT

Sample

Accession:: GSM1436337

ID:: 301436337

SRA Run Selector

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