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Items: 12

1.

Relationship between DNMT1-RNA interactions, DNA methylation and gene expression

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array; Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL11154 GPL10999 GPL6244
8 Samples
Download data: BSP, CEL, GTF, WIG
Series
Accession:
GSE32260
ID:
200032260
2.

[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 18, 2012: annotation table updated with netaffx build 32 July 01, 2016: annotation table updated with netaffx build 35 Protocol: See manufacturer's web site
Organism:
Homo sapiens
136 DataSets
1874 Series
27 Related Platforms
38339 Samples
Download data
Platform
Accession:
GPL6244
ID:
100006244
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

Illumina Genome Analyzer IIx (Homo sapiens)

Platform
Accession:
GPL10999
ID:
100010999
5.

RRBS HL60 rep2

Organism:
Homo sapiens
Source name:
HL60 Cell lines
Platform:
GPL10999
Series:
GSE32168 GSE32260
Download data: BSP
Sample
Accession:
GSM797459
ID:
300797459
6.

RRBS HL60 rep1

Organism:
Homo sapiens
Source name:
HL60 Cell lines
Platform:
GPL10999
Series:
GSE32168 GSE32260
Download data: BSP
Sample
Accession:
GSM797458
ID:
300797458
7.

IgG RIPSeq HL60

Organism:
Homo sapiens
Source name:
HL60 Cell lines
Platform:
GPL10999
Series:
GSE32162 GSE32260
Download data: WIG
Sample
Accession:
GSM797434
ID:
300797434
8.

DNMT1 RIPSeq HL60

Organism:
Homo sapiens
Source name:
HL60 Cell lines
Platform:
GPL10999
Series:
GSE32162 GSE32260
Download data: WIG
Sample
Accession:
GSM797433
ID:
300797433
9.

Total RNA polyA(-)

Organism:
Homo sapiens
Source name:
Myeloid Leukemia
Platform:
GPL11154
Series:
GSE32260 GSE41279
Download data: GTF
Sample
Accession:
GSM1013481
ID:
301013481
10.

Total RNA

Organism:
Homo sapiens
Source name:
Myeloid Leukemia
Platform:
GPL11154
Series:
GSE32260 GSE41279
Download data: GTF
Sample
Accession:
GSM1013480
ID:
301013480
11.

HL60 WT replicate 2

Organism:
Homo sapiens
Source name:
myeloid cell lines HL-60
Platform:
GPL6244
Series:
GSE32153 GSE32260
Download data: CEL
Sample
Accession:
GSM796755
ID:
300796755
12.

HL60 WT replicate 1

Organism:
Homo sapiens
Source name:
myeloid cell lines HL-60
Platform:
GPL6244
Series:
GSE32153 GSE32260
Download data: CEL
Sample
Accession:
GSM796754
ID:
300796754
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Supplemental Content

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