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Items: 6

1.

Hydroxylation of 5-methylcytosine by TET2 maintains the active state of the mammalian HOXA cluster (MeDIP-Seq)

(Submitter supplied) Differentiation is accompanied by extensive epigenomic reprogramming, leading to the repression of stemness factors and the transcriptional maintenance of activated lineage-specific genes. Here we used the mammalian Hoxa cluster of developmental genes as a model system to follow changes in DNA modification patterns during retinoic acid induced differentiation. We found the inactive cluster to be marked by defined patterns of 5-methylcytosine (5mC). more...
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL11154
4 Samples
Download data: SAM
Series
Accession:
GSE33129
ID:
200033129

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

hMeDIP-Seq-induced

Organism:
Homo sapiens
Source name:
NTera2 D1 cell line
Platform:
GPL11154
Series:
GSE33129 GSE33130
Download data: SAM
Sample
Accession:
GSM820541
ID:
300820541

SRA Run Selector

4.

hMeDIP-Seq-uninduced

Organism:
Homo sapiens
Source name:
NTera2 D1 cell line
Platform:
GPL11154
Series:
GSE33129 GSE33130
Download data: SAM
Sample
Accession:
GSM820540
ID:
300820540

SRA Run Selector

5.

MeDIP-Seq-induced

Organism:
Homo sapiens
Source name:
NTera2 D1 cell line
Platform:
GPL11154
Series:
GSE33129 GSE33130
Download data: SAM
Sample
Accession:
GSM820539
ID:
300820539

SRA Run Selector

6.

MeDIP-Seq-uninduced

Organism:
Homo sapiens
Source name:
NTera2 D1 cell line
Platform:
GPL11154
Series:
GSE33129 GSE33130
Download data: SAM
Sample
Accession:
GSM820538
ID:
300820538

SRA Run Selector

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db=gds|term=GSE33129[Accession]|query=1|qty=2|blobid=MCID_6644523c5f31ac4911b2ecc8|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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