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Series GSE33130 Query DataSets for GSE33130
Status Public on May 03, 2012
Title Hydroxylation of 5-methylcytosine by TET2 maintains the active state of the mammalian HOXA cluster
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Contributor(s) Bocker MT, Tuorto F, Raddatz G, Musch T, Yang F, Xu M, Lyko F, Breiling A
Citation(s) 22569366
Submission date Oct 20, 2011
Last update date May 15, 2019
Contact name michael thomas bocker
Organization name DKFZ Heidelberg
Street address Im Neuenheimer Feld
City heidelberg
ZIP/Postal code 69120
Country Germany
 
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (8)
GSM801344 untreated_NT2 cells_control1
GSM801345 14d_retinoic acid_treated NT2 cells
GSM801346 untreated_NT2 cells_control2
This SuperSeries is composed of the following SubSeries:
GSE32362 Hydroxylation of 5-methylcytosine by TET2 maintains the active state of the mammalian HOXA cluster (Infinium HumanMethylation450 Beadchip)
GSE33129 Hydroxylation of 5-methylcytosine by TET2 maintains the active state of the mammalian HOXA cluster (MeDIP-Seq)
Relations
BioProject PRJNA149397

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33130_RAW.tar 24.8 Gb (http)(custom) TAR (of SAM)
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data provided as supplementary file

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