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Items: 7

1.

Genome-wide maps of chromatin remodeler SNF5 in human pluripotent cells.

(Submitter supplied) We report the application of single-molecule-based sequencing technology for high-throughput profiling of SNF5 binding in human pluripotent embryonic carcinoma NCCIT and SNF5 overexpressed NCCIT cells. We generated genome-wide cSNF5 maps of NCCIT and SNF5 overexpressed NCCIT cells from chromatin immunoprecipitated DNA. SNF5 and OCT4 seem not to share their binding in OCT4 centered binding plot in control, while SNF5 overexpression directs SNF5 to OCT4 target genes.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL11154
5 Samples
Download data: BED
Series
Accession:
GSE36134
ID:
200036134

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

N-input

Organism:
Homo sapiens
Source name:
embryonic carcinoma NCCIT
Platform:
GPL11154
Series:
GSE36134 GSE36140
Download data: BED
Sample
Accession:
GSM881713
ID:
300881713

SRA Run Selector

4.

SNF5overexpression-OCT4 ChIP seq

Organism:
Homo sapiens
Source name:
embryonic carcinoma NCCIT
Platform:
GPL11154
Series:
GSE36134 GSE36140
Download data: BED
Sample
Accession:
GSM881712
ID:
300881712

SRA Run Selector

5.

SNF5overexpression-SNF5 ChIP seq

Organism:
Homo sapiens
Source name:
embryonic carcinoma NCCIT
Platform:
GPL11154
Series:
GSE36134 GSE36140
Download data: BED
Sample
Accession:
GSM881711
ID:
300881711

SRA Run Selector

6.

N-OCT4 ChIP seq

Organism:
Homo sapiens
Source name:
embryonic carcinoma NCCIT
Platform:
GPL11154
Series:
GSE36134 GSE36140
Download data: BED
Sample
Accession:
GSM881710
ID:
300881710

SRA Run Selector

7.

N-SNF5 ChIP seq

Organism:
Homo sapiens
Source name:
embryonic carcinoma NCCIT
Platform:
GPL11154
Series:
GSE36134 GSE36140
Download data: BED
Sample
Accession:
GSM881709
ID:
300881709

SRA Run Selector

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db=gds|term=GSE36134[Accession]|query=1|qty=2|blobid=MCID_6643c2915f31ac4911940ff6|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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