GSE40632[Accession] - GEO DataSets - NCBI

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Select item 2000406321.

Genome-wide analysis of the Integrator complex (HTS)

(Submitter supplied) We investigated the genomic occupancy of INTS11, in normal condition and after stimulation of EGF. Total RNAPII was profiled in the presence or absence of INTS11, along with the Super Elongation Complex proteins AFF4 and ELL2. Additionally, we extensively examined the transcriptional response to EGF, before and after depletion of INTS11, using RNA-seq on ribosome-depleted total RNA and Global Run-on sequencing (GRO-seq).

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing

Platforms:: GPL10999 GPL11154
46 Samples

Download data: BEDGRAPH, BW

Series

Accession:: GSE40632

ID:: 200040632

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000111542.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10400 Series
180082 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 1000109993.

Illumina Genome Analyzer IIx (Homo sapiens)

Organism:: Homo sapiens

1096 Series
9927 Samples

Platform

Accession:: GPL10999

ID:: 100010999

Select item 3014051234.

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL10999
Series:: GSE40632 GSE58255

Download data: BEDGRAPH

Sample

Accession:: GSM1405123

ID:: 301405123

SRA Run Selector

Select item 3014051225.

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL10999
Series:: GSE40632 GSE58255

Download data: BEDGRAPH

Sample

Accession:: GSM1405122

ID:: 301405122

SRA Run Selector

Select item 3014051206.

RNAPII_cycl_rep1

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL10999
Series:: GSE40632 GSE58255

Download data: BEDGRAPH

Sample

Accession:: GSM1405120

ID:: 301405120

SRA Run Selector

Select item 3014051187.

INTS11_cycl_rep1

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL10999
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405118

ID:: 301405118

SRA Run Selector

Select item 3014051218.

RNAPII_cycl_rep2

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405121

ID:: 301405121

SRA Run Selector

Select item 3014051199.

INTS11_cycl_rep2

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405119

ID:: 301405119

SRA Run Selector

Select item 30140511710.

RNAPII_DOX_EGF_rep2

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405117

ID:: 301405117

SRA Run Selector

Select item 30140511611.

RNAPII_CTRL_EGF_rep2

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405116

ID:: 301405116

SRA Run Selector

Select item 30140511512.

RNAPII_DOX_EGF_rep1

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405115

ID:: 301405115

SRA Run Selector

Select item 30140511413.

RNAPII_CTRL_EGF_rep1

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405114

ID:: 301405114

SRA Run Selector

Select item 30140511314.

RNAPII_20min_rep2

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405113

ID:: 301405113

SRA Run Selector

Select item 30140511215.

RNAPII_0min_rep2

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405112

ID:: 301405112

SRA Run Selector

Select item 30140511116.

RNAPII_20min_rep1

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405111

ID:: 301405111

SRA Run Selector

Select item 30140511017.

RNAPII_0min_rep1

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405110

ID:: 301405110

SRA Run Selector

Select item 30140510918.

GRO_DOX_EGF_rep2

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405109

ID:: 301405109

SRA Run Selector

Select item 30140510819.

GRO_CTRL_EGF_rep2

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405108

ID:: 301405108

SRA Run Selector

Select item 30140510720.

GRO_DOX_EGF_rep1

Organism:: Homo sapiens

Source name:: HeLa

Platform:: GPL11154
Series:: GSE40632 GSE58255

Download data: BW

Sample

Accession:: GSM1405107

ID:: 301405107

SRA Run Selector

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