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Items: 9

1.

Transcriptome-wide analyses of CstF64-RNA interactions in global regulation of mRNA alternative polyadenylation

(Submitter supplied) We mapped CstF64-RNA interactions at the transcriptome level and studied CstF64-mediated regulation of global mRNA alternative polyadenylation by using iCLIP-seq and direct RNA sequencing analyses.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL11154 GPL14761
6 Samples
Download data: BED
Series
Accession:
GSE40859
ID:
200040859

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Helicos HeliScope (Homo sapiens)

Organism:
Homo sapiens
28 Series
719 Samples
Download data
Platform
Accession:
GPL14761
ID:
100014761

3.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

4.

direct RNA sequencing (DRS) of CstF64&t-RNAi cells

Organism:
Homo sapiens
Source name:
Stable HeLa cell line transfected with siRNAs
Platform:
GPL14761
Series:
GSE40859
Download data: BED
Sample
Accession:
GSM1003592
ID:
301003592

SRA Run Selector

5.

direct RNA sequencing (DRS) of CstF64-RNAi cells

Organism:
Homo sapiens
Source name:
Stable HeLa cell line
Platform:
GPL14761
Series:
GSE40859
Download data: BED
Sample
Accession:
GSM1003591
ID:
301003591

SRA Run Selector

6.

direct RNA sequencing (DRS) of control HeLa cells

Organism:
Homo sapiens
Source name:
HeLa
Platform:
GPL14761
Series:
GSE40859
Download data: BED
Sample
Accession:
GSM1003590
ID:
301003590

SRA Run Selector

7.

CstF64-iCLIP rep3

Organism:
Homo sapiens
Source name:
HeLa
Platform:
GPL11154
Series:
GSE40859
Download data: BED
Sample
Accession:
GSM1003589
ID:
301003589

SRA Run Selector

8.

CstF64-iCLIP rep2

Organism:
Homo sapiens
Source name:
HeLa
Platform:
GPL11154
Series:
GSE40859
Download data: BED
Sample
Accession:
GSM1003588
ID:
301003588

SRA Run Selector

9.

CstF64-iCLIP rep1

Organism:
Homo sapiens
Source name:
HeLa
Platform:
GPL11154
Series:
GSE40859
Download data: BED
Sample
Accession:
GSM1003587
ID:
301003587

SRA Run Selector

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