GEO DataSets

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 07, 2012: annotation table updated with netaffx build 32 June 27, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site The GeneChip Rat Genome 230 2.0 Array is a powerful tool for toxicology, neurobiology, and other applications using rat as a model organism. more...

Organism:

Rattus norvegicus

107 DataSets

747 Series

13 Related Platforms

23042 Samples

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(Submitter supplied) The HumanHT-12 v4 Expression BeadChip provides high throughput processing of 12 samples per BeadChip without the need for expensive, specialized automation. The BeadChip is designed to support flexible usage across a wide-spectrum of experiments. The updated content on the HumanHT-12 v4 Expression BeadChips provides more biologically meaningful results through genome-wide transcriptional coverage of well-characterized genes, gene candidates, and splice variants. more...

Organism:

Homo sapiens

51 DataSets

2930 Series

4 Related Platforms

104255 Samples

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(Submitter supplied) Experimental high density gene expression tiling array for testing spliceform discrimination and quantification performance in collaboration with the FDA and Agilent as part of the SEQC/MAQC3 benchmark study. The array probes 776 complex genes representative of the AceView gene model annotation (http://www.ncbi.nlm.nih.gov/IEB/Research/Acembly/), as well as 92 ERCC spike-in controls. Protocol: see manufacturer's web site at http://www.agilent.com/

Organism:

Homo sapiens

2 Series

16 Samples

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(Submitter supplied) PCR assay; total volume: 5 μl; instrument: CFX384 (with automation); mastermix: SsoAdvanced SYBR; primer concentration: 250 nM each Samples: cDNA: 25 ng (total RNA equivalents); gDNA: 2.5 ng (Roche); NTC: water + carrier (5 ng/μl yeast transfer RNA); synthetic template (pooled 60-mers in concentration range: 2E7 – 2E1 copies) PCR program: default cycling protocol for SsoAdvanced SYBR (Ta=60°C) Protocol: see manufacturer's website

Organism:

Homo sapiens

2 Series

4 Samples

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(Submitter supplied) Brainarray: HuGene20stv1_Hs_ENTREZG_17.0.0 Protocol: See manufacturer's web site

Organism:

Homo sapiens

42 Series

1 Related Platform

394 Samples

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(Submitter supplied) NB-CustomArray_4x44k Protocol: see manufacturer's web site at http://www.agilent.com/

Organism:

Homo sapiens

15 Series

1743 Samples

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(Submitter supplied) See details from Affymetrix. This is a commercially available chip.

Organism:

Homo sapiens

88 Series

6751 Samples

Download data: CDF, TXT