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Items: 12

1.

Impaired DNA damage metabolism promotes autoimmunity in TREX1 deficiency 

(Submitter supplied) Constitutive low level DNA damage is linked to innate immune activation. Hierarchical clustering of over 9000 transcripts revealed remarkably similar profiles in a patient with lupus erythematosus and a patient with AGS with up-regulation of genes involved in DNA damage signaling, p53-inducible genes, senescence-associated genes as well as up-regulation of interferon-stimulated genes. Transcriptional profiling of fibroblasts exposed to oxidative stress showed a marked up-regulation of genes involved in DNA replication/repair and replication licensing in TREX1-deficient cells compared to wild type cells suggesting massive replication stress.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16791
10 Samples
Download data: XLSX
2.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
3.

AGS1 [L2549_H2O2]

Organism:
Homo sapiens
Source name:
fibroblast
Platform:
GPL16791
Series:
GSE59233
Download data
Sample
Accession:
GSM1431065
ID:
301431065
4.

AGS1 [L2548]

Organism:
Homo sapiens
Source name:
fibroblast
Platform:
GPL16791
Series:
GSE59233
Download data
Sample
Accession:
GSM1431064
ID:
301431064
5.

SLE1 [L2551_H2O2]

Organism:
Homo sapiens
Source name:
fibroblast
Platform:
GPL16791
Series:
GSE59233
Download data
Sample
Accession:
GSM1431063
ID:
301431063
6.

SLE1 [L2550]

Organism:
Homo sapiens
Source name:
fibroblast
Platform:
GPL16791
Series:
GSE59233
Download data
Sample
Accession:
GSM1431062
ID:
301431062
7.

WT2 [L2547_H2O2]

Organism:
Homo sapiens
Source name:
fibroblast
Platform:
GPL16791
Series:
GSE59233
Download data
Sample
Accession:
GSM1431061
ID:
301431061
8.

WT1 [L2546_H2O2]

Organism:
Homo sapiens
Source name:
fibroblast
Platform:
GPL16791
Series:
GSE59233
Download data
Sample
Accession:
GSM1431060
ID:
301431060
9.

WT2 [L2553]

Organism:
Homo sapiens
Source name:
fibroblast
Platform:
GPL16791
Series:
GSE59233
Download data
Sample
Accession:
GSM1431059
ID:
301431059
10.

WT1 [L2545]

Organism:
Homo sapiens
Source name:
fibroblast
Platform:
GPL16791
Series:
GSE59233
Download data
Sample
Accession:
GSM1431058
ID:
301431058
11.

WT2 [L2248]

Organism:
Homo sapiens
Source name:
fibroblast
Platform:
GPL16791
Series:
GSE59233
Download data
Sample
Accession:
GSM1431057
ID:
301431057
12.

WT1 [L2244]

Organism:
Homo sapiens
Source name:
fibroblast
Platform:
GPL16791
Series:
GSE59233
Download data
Sample
Accession:
GSM1431056
ID:
301431056
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Supplemental Content

db=gds|term=GSE59233[Accession]|query=1|qty=2|blobid=MCID_665342d06c053549898aea36|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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