GSE62966[Accession] - GEO DataSets - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Search results

Items: 1 to 20 of 32

<< First< Prev

Page of 2

Select item 2000629661.

Analysis of allele specific expression and its chromatin state to identify genes that are escaping X chromosome inactivation

(Submitter supplied) Disappearance of the Barr body has long been considered a hallmark of cancer, although whether this corresponds to epigenetic instability and transcriptional reactivation, or to genetic loss, has remained unclear. Here we show that in breast cancer cell lines as well as primary breast tumors, the inactive X chromosome frequently displays a highly abnormal 3D nuclear organization, with global perturbations in its characteristic heterochromatic state, including apparent gain of euchromatic marks and lessening of repressive marks such as H3K27me3 and promoter DNA methylation. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other

Platforms:: GPL11154 GPL16791
29 Samples

Download data: BEDGRAPH, FPKM_TRACKING, TXT, XLS

Series

Accession:: GSE62966

ID:: 200062966

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000167912.

Illumina HiSeq 2500 (Homo sapiens)

Organism:: Homo sapiens

11886 Series
340700 Samples

Platform

Accession:: GPL16791

ID:: 100016791

Select item 1000111543.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10425 Series
180579 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3015373114.

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL11154
Series:: GSE62907 GSE62966

Sample

Accession:: GSM1537311

ID:: 301537311

SRA Run Selector

Select item 3015373105.

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL11154
Series:: GSE62907 GSE62966

Sample

Accession:: GSM1537310

ID:: 301537310

SRA Run Selector

Select item 3015373096.

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL11154
Series:: GSE62907 GSE62966

Sample

Accession:: GSM1537309

ID:: 301537309

SRA Run Selector

Select item 3015373087.

Organism:: Homo sapiens

Source name:: Human Embryonic Lung Fibroblasts

Platform:: GPL11154
Series:: GSE62907 GSE62966

Sample

Accession:: GSM1537308

ID:: 301537308

SRA Run Selector

Select item 3015373028.

WCE-ZR751_ChIP-seq

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL16791
Series:: GSE62907 GSE62966

Download data: BEDGRAPH

Sample

Accession:: GSM1537302

ID:: 301537302

SRA Run Selector

Select item 3015373079.

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL11154
Series:: GSE62907 GSE62966

Download data: BEDGRAPH, FPKM_TRACKING

Sample

Accession:: GSM1537307

ID:: 301537307

SRA Run Selector

Select item 30153730110.

WCE-MDAMB436_ChIP-seq

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL16791
Series:: GSE62907 GSE62966

Download data: BEDGRAPH

Sample

Accession:: GSM1537301

ID:: 301537301

SRA Run Selector

Select item 30153730611.

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL11154
Series:: GSE62907 GSE62966

Download data: BEDGRAPH, FPKM_TRACKING

Sample

Accession:: GSM1537306

ID:: 301537306

SRA Run Selector

Select item 30153730012.

WCE-SKBR3_ChIP-seq

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL16791
Series:: GSE62907 GSE62966

Download data: BEDGRAPH

Sample

Accession:: GSM1537300

ID:: 301537300

SRA Run Selector

Select item 30153730513.

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL11154
Series:: GSE62907 GSE62966

Download data: BEDGRAPH, FPKM_TRACKING

Sample

Accession:: GSM1537305

ID:: 301537305

SRA Run Selector

Select item 30153729914.

WCE-WI38_ChIP-seq

Organism:: Homo sapiens

Source name:: Human Embryonic Lung Fibroblasts

Platform:: GPL16791
Series:: GSE62907 GSE62966

Download data: BEDGRAPH

Sample

Accession:: GSM1537299

ID:: 301537299

SRA Run Selector

Select item 30153730415.

WI38_Clone39_mRNA

Organism:: Homo sapiens

Source name:: Human Embryonic Lung Fibroblasts

Platform:: GPL11154
Series:: GSE62907 GSE62966

Download data: BEDGRAPH, FPKM_TRACKING

Sample

Accession:: GSM1537304

ID:: 301537304

SRA Run Selector

Select item 30153729816.

WCE-HMEC_ChIP-seq

Organism:: Homo sapiens

Source name:: Human Mammary Epithelial Cells

Platform:: GPL16791
Series:: GSE62907 GSE62966

Download data: BEDGRAPH

Sample

Accession:: GSM1537298

ID:: 301537298

SRA Run Selector

Select item 30153730317.

WI38_Clone42_mRNA

Organism:: Homo sapiens

Source name:: Human Embryonic Lung Fibroblasts

Platform:: GPL11154
Series:: GSE62907 GSE62966

Download data: BEDGRAPH, FPKM_TRACKING

Sample

Accession:: GSM1537303

ID:: 301537303

SRA Run Selector

Select item 30153729718.

RNAPolII-ZR751_ChIP-seq

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL16791
Series:: GSE62907 GSE62966

Download data: BEDGRAPH

Sample

Accession:: GSM1537297

ID:: 301537297

SRA Run Selector

Select item 30153729619.

RNAPolII-MDAMB436_ChIP-seq

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL16791
Series:: GSE62907 GSE62966

Download data: BEDGRAPH

Sample

Accession:: GSM1537296

ID:: 301537296

SRA Run Selector

Select item 30153729520.

RNAPolII-SKBR3_ChIP-seq

Organism:: Homo sapiens

Source name:: Human Breast Cancer Cells

Platform:: GPL16791
Series:: GSE62907 GSE62966

Download data: BEDGRAPH

Sample

Accession:: GSM1537295

ID:: 301537295

SRA Run Selector

<< First< Prev

Page of 2

Supplemental Content

Filters: Manage Filters

Find related data

Search details

Important Links

Recent activity

Clear Turn Off Turn On

GSE62966[Accession] (32)
GEO DataSets

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets