GSE67978[Accession] - GEO DataSets - NCBI

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Select item 2000679781.

Epigenomic annotation of gene regulatory alterations during evolution of the primate brain

(Submitter supplied) While genome sequencing has identified numerous non-coding alterations between primate species, which of these are regulatory and potentially relevant to the evolution of the human brain is unclear. Here, we annotate cis-regulatory elements (CREs) in the human, rhesus macaque and chimpanzee genome using ChIP-sequencing in different anatomical parts of the adult brain. We find high similarity in the genomic positioning of CREs between rhesus macaque and humans, suggesting that the majority of these elements were already present in a common ancestor 25 million years ago. more...

Organism:: Mus musculus; Pan troglodytes; Macaca mulatta; Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

8 related Platforms
98 Samples

Download data: BEDGRAPH, BW, NARROWPEAK, TXT

Series

Accession:: GSE67978

ID:: 200067978

PubMed Similar studies SRA Run Selector

Select item 1000211212.

Illumina NextSeq 500 (Pan troglodytes)

Organism:: Pan troglodytes

12 Series
139 Samples

Platform

Accession:: GPL21121

ID:: 100021121

Select item 1000211203.

Illumina NextSeq 500 (Macaca mulatta)

Organism:: Macaca mulatta

43 Series
1339 Samples

Platform

Accession:: GPL21120

ID:: 100021120

Select item 1000185734.

Illumina NextSeq 500 (Homo sapiens)

Organism:: Homo sapiens

12044 Series
332532 Samples

Platform

Accession:: GPL18573

ID:: 100018573

Select item 1000168095.

Illumina HiSeq 2000 (Pan troglodytes)

Organism:: Pan troglodytes

18 Series
281 Samples

Platform

Accession:: GPL16809

ID:: 100016809

Select item 1000162886.

AB 5500xl Genetic Analyzer (Homo sapiens)

Organism:: Homo sapiens

70 Series
1301 Samples

Platform

Accession:: GPL16288

ID:: 100016288

Select item 1000149547.

Illumina HiSeq 2000 (Macaca mulatta)

Organism:: Macaca mulatta

65 Series
1307 Samples

Platform

Accession:: GPL14954

ID:: 100014954

Select item 1000131128.

Illumina HiSeq 2000 (Mus musculus)

Organism:: Mus musculus

8244 Series
187377 Samples

Platform

Accession:: GPL13112

ID:: 100013112

Select item 1000111549.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10425 Series
180579 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 30197455410.

Input Chimpanzee Brain ThalamicNuclei PT3

Organism:: Pan troglodytes

Source name:: Chimpanzee female thalamic nuclei tissue

Platform:: GPL21121
Series:: GSE67978

Sample

Accession:: GSM1974554

ID:: 301974554

SRA Run Selector

Select item 30197455311.

Input Chimpanzee Brain PrecentralGyrus PT3

Organism:: Pan troglodytes

Source name:: Chimpanzee female precentral gyrus tissue

Platform:: GPL21121
Series:: GSE67978

Sample

Accession:: GSM1974553

ID:: 301974553

SRA Run Selector

Select item 30197455212.

Input Chimpanzee Brain OccipitalPole PT3

Organism:: Pan troglodytes

Source name:: Chimpanzee female occipital pole tissue

Platform:: GPL21121
Series:: GSE67978

Sample

Accession:: GSM1974552

ID:: 301974552

SRA Run Selector

Select item 30197455113.

Input Chimpanzee Brain Cerebellum PT3

Organism:: Pan troglodytes

Source name:: Chimpanzee female cerebellum tissue

Platform:: GPL21121
Series:: GSE67978

Sample

Accession:: GSM1974551

ID:: 301974551

SRA Run Selector

Select item 30193719314.

Input Chimpanzee Brain WhiteMatter PT3

Organism:: Pan troglodytes

Source name:: Chimpanzee female white matter tissue

Platform:: GPL21121
Series:: GSE67978

Sample

Accession:: GSM1937193

ID:: 301937193

SRA Run Selector

Select item 30193719215.

Input Chimpanzee Brain Putamen PT3

Organism:: Pan troglodytes

Source name:: Chimpanzee female putamen tissue

Platform:: GPL21121
Series:: GSE67978

Sample

Accession:: GSM1937192

ID:: 301937192

SRA Run Selector

Select item 30193719116.

Input Chimpanzee Brain PrefrontalCortex PT3

Organism:: Pan troglodytes

Source name:: Chimpanzee female prefrontal cortex tissue

Platform:: GPL21121
Series:: GSE67978

Sample

Accession:: GSM1937191

ID:: 301937191

SRA Run Selector

Select item 30193719017.

Input Chimpanzee Brain CaudateNucleus PT3

Organism:: Pan troglodytes

Source name:: Chimpanzee female prefrontal cortex tissue

Platform:: GPL21121
Series:: GSE67978

Sample

Accession:: GSM1937190

ID:: 301937190

SRA Run Selector

Select item 30182141318.

H3K27ac Chimpanzee Brain WhiteMatter PT3

Organism:: Pan troglodytes

Source name:: Chimpanzee female white matter tissue

Platform:: GPL16809
Series:: GSE67978

Download data: BEDGRAPH, BW, NARROWPEAK, TXT

Sample

Accession:: GSM1821413

ID:: 301821413

SRA Run Selector

Select item 30182141219.

H3K27ac Chimpanzee Brain WhiteMatter PT1

Organism:: Pan troglodytes

Source name:: Chimpanzee female white matter tissue

Platform:: GPL16809
Series:: GSE67978

Download data: BEDGRAPH, BW, NARROWPEAK, TXT

Sample

Accession:: GSM1821412

ID:: 301821412

SRA Run Selector

Select item 30182141120.

H3K27ac Chimpanzee Brain ThalamicNuclei PT3

Organism:: Pan troglodytes

Source name:: Chimpanzee female thalamic nuclei tissue

Platform:: GPL16809
Series:: GSE67978

Download data: BEDGRAPH, BW, NARROWPEAK, TXT

Sample

Accession:: GSM1821411

ID:: 301821411

SRA Run Selector

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