| GSE57973 |
Age-dependent gene expression changes in human islets |
| GSE58310 |
Epigenetic programming during monocyte to macrophage differentiation and trained innate immunity |
| GSE58740 |
Chromatin dynamics of p53 binding sites in IMR90 |
| GSE60144 |
Dual RNA-seq of diverse human, mouse and pig cell-types infected with various Salmonella strains |
| GSE61332 |
Native Elongating Transcript Sequencing Reveals Human Transcriptional Activity at Nucleotide Resolution |
| GSE61911 |
Glucocorticoid receptor and nuclear factor kappa-b affect 3D chromatin organization |
| GSE62909 |
SOX15 governs a transcriptional program in human esophageal stratified epithelium and in a subset of esophageal adenocarcinomas |
| GSE63222 |
Inhibitors of LSD1 target demethylase-independent activity to induce differentiation in acute myeloid leukemia |
| GSE63284 |
Response and resistance to BET bromodomain inhibitors in triple negative breast cancer [Chem-Seq] |
| GSE63440 |
Autophagy mediates degradation of nuclear lamina |
| GSE63581 |
Response and resistance to BET bromodomain inhibitors in triple negative breast cancer [ChIP-Seq] |
| GSE63582 |
Response and resistance to BET bromodomain inhibitors in triple negative breast cancer [RNA-Seq] |
| GSE63584 |
Response and resistance to BET bromodomain inhibitors in triple negative breast cancer |
| GSE64301 |
SUMOylation regulates the protein network and chromatin accessibility at glucocorticoid receptor-binding sites [sequencing] |
| GSE64328 |
Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation |
| GSE64332 |
Human DIS3 shapes the RNA polymerase II transcriptome degrading variety of unwanted transcripts. |
| GSE64373 |
SUMOylation regulates the protein network and chromatin accessibility at glucocorticoid receptor-binding sites |
| GSE64744 |
Small RNA profiling reveals deregulated PTEN/PI3K/Akt pathway in asthmatic bronchial smooth muscle cells |
| GSE65138 |
Effect of cortistatin A (CA) on enhancer occupancy in CA-sensitive and -insensitive human cell lines |
| GSE65161 |
Mediator kinase inhibition further activates super-enhancer-associated genes in AML |
| GSE65253 |
Prospective derivation of a 'Living Organoid Biobank' of colorectal cancer patients |
| GSE65360 |
Single-cell chromatin accessibility data using scATAC-seq |
| GSE65525 |
Droplet barcoding for single cell transcriptomics applied to embryonic stem cells |
| GSE65886 |
H4K12ac is regulated by estrogen receptor-alpha and is associated with BRD4 function and inducible transcription |
| GSE66053 |
Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms |
| GSE66216 |
Nucleosome dynamics in human colorectal cancer specimens reveal activation of a CNOT3-regulated pathway of embryonic stem cell self-renewal |
| GSE66357 |
Scalable Microfluidics for Single Cell RNA Printing and Sequencing |
| GSE66843 |
A cell-based model unravels drivers for hepatocarcinogenesis and targets for clinical chemoprevention |
| GSE67758 |
Dual RNA-seq – High-resolution comparative Dual RNA-seq time-course |
| GSE67809 |
Genome-wide chromatin binding of transcription factor E2F1 in castration resistant prostate cancer (CRPC) cells |
| GSE67835 |
A survey of human brain transcriptome diversity at the single cell level |
| GSE67866 |
RNA sequencing of cells treated with DMSO or Retinoic acid during cardiac differentiation |
| GSE67978 |
Epigenomic annotation of gene regulatory alterations during evolution of the primate brain |
| GSE68045 |
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [FAST-iCLIP] |
| GSE68053 |
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription |
| GSE68102 |
Multiplex Single Cell Profiling of Chromatin Accessibility by Combinatorial Cellular Indexing [RNA-seq] |
| GSE68103 |
Multiplex Single Cell Profiling of Chromatin Accessibility by Combinatorial Cellular Indexing |
| GSE68109 |
Impact of flanking chromosomal sequences on localization and silencing by the ncRNA XIST |
| GSE68401 |
Enhancer activation during EGF response |
| GSE69110 |
Distinct regulatory programs for Sox9 in transcriptional regulation of the developing mammalian chondrocyte [RNA-seq] |
| GSE69111 |
Distinct regulatory programs for Sox9 in transcriptional regulation of the developing mammalian chondrocyte |
| GSE69112 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [ChIP-Seq 3] |
| GSE69114 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [RNA-Seq] |
| GSE69420 |
Finding missing proteins from epigenetically manipulated human cells |
| GSE69472 |
RNA Proximity Ligation to Resolve Intramolecular RNA Structures in situ |
| GSE69516 |
EHMT1 and EHMT2 inhibition induce fetal hemoglobin expression [ChIP-seq] |
| GSE69558 |
Detection of Enhancer-Associated Rearrangements Reveals Mechanisms of Oncogene Dysregulation in B-cell Lymphoma [ChIP-Seq] |
| GSE69739 |
Genome-wide binding profiles of an artificial zinc finger protein with or without a KLF3 functional domain |
| GSE69749 |
Sex-specific chromatin accessibility profiling in human PBMCs |
| GSE69836 |
Reversal of microRNA-150 silencing disadvantages crizotinib-resistant NPM-ALK-positive cell growth. |
| GSE69877 |
MCPyV ST, MAX and the TRRAP complex cooperate to bind to Transcription Start Sites |
| GSE69878 |
MCPyV ST activates Max target genes by recruiting TRRAP/EP400 complex |
| GSE69889 |
Genome-wide Circadian Control of Transcription at Active Enhancers Regulates Insulin Secretion and Diabetes Risk |
| GSE69977 |
Fine-mapping of DNA modifications in the lactase gene region of humans and mice |
| GSE69979 |
Epigenetics of lactose intolerance and lactase persistence |
| GSE70000 |
Ubiquitin-dependent turnover of MYC promotes loading of the PAF complex on RNA Polymerase II to drive transcriptional elongation (RNA-seq) |
| GSE70001 |
Ubiquitin-dependent turnover of MYC promotes loading of the PAF complex on RNA Polymerase II to drive transcriptional elongation (ChIP-seq) |
| GSE70009 |
Ubiquitin-dependent turnover of MYC promotes loading of the PAF complex on RNA Polymerase II to drive transcriptional elongation |
| GSE70078 |
Androgen receptor programming in human tissue implicates HOXB13 in prostate pathogenesis [RNA-Seq] |
| GSE70079 |
Androgen receptor programming in human tissue implicates HOXB13 in prostate pathogenesis |
| GSE70101 |
Mini-kidneys from human pluripotent cells model normal human fetal kidney development and response to nephrotoxicity |
| GSE70408 |
PAF1, a molecular regulator of promoter-proximal pausing by RNA Polymerase II |
| GSE70519 |
DNA Cytosine Hydroxymethylation Levels Are Distinct Among Peripheral Blood Leukocytes |
| GSE70630 |
Single cell RNA-seq analysis of oligodendroglioma |
| GSE70668 |
Mitotic stress is an integral part of the oncogene-induced senescence program that promotes multinucleation and cell cycle arrest |
| GSE70694 |
Cas9 gRNA engineering for selectable genome editing, activation and repression |
| GSE70920 |
The chromatin remodeler ATRX binds to atypical chromatin domains at the 3’ exons of ZNF genes to preserve H3K9me3 enrichment |
| GSE70961 |
Pancreatic Beta Cell Enhancers Regulate Rhythmic Transcription of Exocyst Triggering and Diabetes |
| GSE70991 |
Insulator dysfunction and oncogene activation in IDH mutant gliomas |
| GSE71422 |
EHMT1 and EHMT2 inhibition induce fetal hemoglobin expression |
| GSE71456 |
Derivation and differentiation of haploid human embryonic stem cells [RNA-Seq 1] |
| GSE71458 |
Derivation and differentiation of haploid human embryonic stem cells |
| GSE71595 |
RNA-sequencing of cells derived from the site of inflammation of Juvenile Idiopathic Arthritis patients |
| GSE71596 |
Epigenetic profiling of Juvenile Idiopathic Arthritits (JIA) patients |
| GSE71597 |
Epigenetic profiling and RNA-sequencing of Juvenile Idiopathic Arthritits (JIA) patients |
| GSE71797 |
Genome-wide RNA-sequencing (RNA-seq) of benign and malignant prostate cell lines without and with androgen (R1881) stimulation. |
| GSE72056 |
Single cell RNA-seq analysis of melanoma |
| GSE72141 |
GATA3-mediated chromatin reprogramming in breast cancer cells |
| GSE72250 |
Characterization of chromatin accessibility through the DNaseI hypersensitivity assay in breast cancer cells treated with either Dex or E2 |
| GSE72252 |
DNaseI hypersensitivity assay and ER, GR, and FoxA1 binding patterns in breast cancer cells |
| GSE72400 |
naive T cell heterogeneity after neonatal thymectomy |
| GSE72622 |
KAP1 Recruitment of the 7SK snRNP to Promoters Enables Transcription Elongation by RNA Polymerase II |
| GSE72631 |
Effects on the transcriptome upon deletion of distal elements are not correlated with the size of H3K27Ac peaks in human cells |
| GSE72816 |
CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription |
| GSE73065 |
High-throughput single-base resolution mapping of 2’-O-Methylated residues |
| GSE73099 |
Small RNA and High Molecular Weight RNA Deep Sequencing Analysis of miR-17~92 Mimics Transfected HeLa cells |
| GSE73206 |
ATAC-Seq on Cohesin mutant HSPCs |
| GSE73207 |
ChIP-Seq on Cohesin mutant TF-1 Cell Line |
| GSE73319 |
CCAT1 is a cMYC super-enhancer templated RNA that predicts BET sensitivity in cancer |
| GSE73342 |
Next Generation Sequencing of small non-coding RNAs in the tissue of patients with renal cell carcinoma |
| GSE73398 |
Fixed tissue ChIP-Seq (FiT-Seq) of archived clinical samples reveals chromatin dynamics and tumor-specific enhancer profiles |
| GSE73616 |
An interaction with Ewing's sarcoma breakpoint protein EWS defines the subset of ETS factors rearranged in prostate cancer |
| GSE73721 |
RNA-Seq of human astrocytes |
| GSE73845 |
Functional characterization of RNA-binding protein IMP2 in primary Glioma cell lines [HTS] |
| GSE73847 |
Functional characterization of RNA-binding protein IMP2 in primary Glioma cell lines |
| GSE73982 |
A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA [SHSY5Y cells] |
| GSE73999 |
P120-catenin dependent glioma-cell networks drive growth and diffuse brain infiltration |
| GSE74072 |
Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes |
| GSE74141 |
NAD+ Analog-sensitive PARPs Reveal a Role for PARP-1 in Transcription Elongation |
| GSE74142 |
NAD+ Analog-sensitive PARPs Reveal a Role for PARP-1 in Transcription Elongation |
| GSE74180 |
Repression of stress-induced LINE-1 expression protects cancer cell populations from lethal drug-exposures |
| GSE74198 |
Next generation sequencing identifies circulating microRNAs in cardiac arrest patients |
| GSE74207 |
A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA [single cell sequencing analysis] |
| GSE74210 |
A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA |
| GSE74246 |
Unstranded RNA sequencing data |
| GSE74279 |
Positional proteomics reveals differences in N-terminal proteoform stability |
| GSE74310 |
Single-cell chromatin accessibility data using scATAC-seq |
| GSE74311 |
H3K27ac ChIP-Seq in LOUCY |
| GSE74312 |
Long noncoding RNA signatures define oncogenic subtypes in T-cell acute lymphoblastic leukemia |
| GSE74353 |
RNA duplex map in living cells reveals higher order transcriptome structure |
| GSE74359 |
A multiplexed system for quantitative comparisons of chromatin landscapes |
| GSE74450 |
Direct Isolation and Characterization of Human Nephron Progenitors. |
| GSE74457 |
A Dual Molecular Analog Tuner for Dissecting Mammalian Protein Function |
| GSE74484 |
Gene expression profiling in metabolically heterogeneous human lung tumors |
| GSE74520 |
Epigenetic Profile in Transcription elongation factors are in vivo-specific cancer dependencies in glioma |
| GSE74529 |
Transcription elongation factors are in vivo-specific cancer dependencies in glioma |
| GSE74557 |
Adaptive chromatin remodeling in glioblastoma stem cell plasticity and drug tolerance |
| GSE74812 |
MLL-rearranged acute lymphoblastic leukemias upregulate BCL-2 through H3K79 methylation and are highly sensitive to the BCL-2 specific antagonist ABT-199 |
| GSE74912 |
ATAC-seq data |
| GSE74981 |
Next generation sequencing to elucidate the novel function of RORC (RORgamma) in breast cancer |
| GSE75059 |
Transcriptional profile changes by Prox1 expression in thyroid cancer cells |
| GSE75189 |
High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities |
| GSE75231 |
Genome-Wide Chromatin Landscape Transitions Identify Novel Pathways in Early Commitment to Osteoblast Differentiation (Dnase-Seq) |
| GSE75232 |
Genome-Wide Chromatin Landscape Transitions Identify Novel Pathways in Early Commitment to Osteoblast Differentiation |
| GSE75247 |
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation |
| GSE75384 |
Lineage-specific and single cell chromatin accessibility charts human hematopoiesis and leukemia evolution |
| GSE75411 |
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation |
| GSE75432 |
Muscle transcriptome analysis following Total Knee Arthroplasty with Tourniquet |
| GSE75439 |
Identification of RNAs bound to endogenous PUM2 in HCT116 cells |
| GSE75452 |
Pan-cancer transcriptomic analysis associates long non-coding RNAs with key mutational driver events |
| GSE75515 |
Gene expression analysis of human haploid cells (HAP1) depleted of SMARCB1 and SMARCA4 |
| GSE75527 |
Landscape of human mast cell chromatin: a rich resource for identification of novel mediators and genetic drivers of allergic and inflammatory diseases |
| GSE76006 |
ATAC-Se1 to investigate the spatial choreography of the accessible genome |
| GSE76116 |
ChIP-seq analysis of MBD3 in human breast cancer cells |
| GSE76125 |
Effect of mitochondria deficiency on senescence-associated gene expression |
| GSE76147 |
A druggable TCF4- and BRD4-dependent transcriptional network sustains malignancy in blastic plasmacytoid dendritic cell neoplasm (ChIP-Seq) |
| GSE76224 |
Single-cell epigenomic variability reveals functional cancer heterogeneity |
| GSE76268 |
Integration of ATAC-seq and RNA-seq Identifies Human Alpha Cell and Beta Cell Signature Genes |
| GSE76336 |
Novel contribution of acetylated histone variant H2A.Z in activation of neo-enhancers in prostate cancer [ChIP-seq] |
| GSE76337 |
Novel contribution of acetylated histone variant H2A.Z in activation of neo-enhancers in prostate cancer |
| GSE76465 |
An oncogenic MYB feedback loop drives alternate cell fates in adenoid cystic carcinoma |
| GSE76663 |
miRNAs affected by antagomiR-17 treatment |
| GSE76688 |
G-quadruplex structures mark human regulatory chromatin |
| GSE76763 |
UMI-4C for quantitative and targeted chromosomal contact profiling |
| GSE76937 |
RUNX2 and CBFB genome-wide binding in osteosarcoma SAOS2 cells |
| GSE76955 |
Genome-wide uniformity of human “open” pre-initiation complexes |
| GSE77031 |
Double-stranded RNA sequencing of HCT116 cells with 5-Aza-CdR and combination treatment compared to untreated cells |
| GSE77034 |
Total RNA sequencing of HCT116 cells with vitamin C, 5-Aza-CdR and combination treatment compared to untreated cells II |
| GSE77088 |
Time course RNA-Seq of Innate Lymphoid Cells in Early Acute HIV Infection |
| GSE77129 |
Wiskott-Aldrich Syndrome-causative mutations disrupt alternative splicing and promote gene networks predisposed to hematologic malignancies |
| GSE77282 |
rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome |
| GSE77292 |
Ribosomal footprinting of CN34-Parental and CN34-LM1a |
| GSE77315 |
Ribosomal footprinting of MDA-Parental and MDA-LM2 |
| GSE77317 |
Ribosomal footprinting of MDA_Ctrl and MDA_Arg overexpression cell lines |
| GSE77328 |
OmoMYC blunts promoter invasion by oncogenic MYC to inhibit gene expression characteristic of MYC-dependent tumors |
| GSE77347 |
Ribosomal footprinting of MDA_Ctrl and MDA_Glu overexpression cell lines |
| GSE77352 |
A RUNX2-mediated Epigenetic Regulation of the Survival of p53 Defective Cancer Cells |
| GSE77356 |
Different promoter affinities account for specificity in MYC-dependent gene regulation |
| GSE77381 |
Arnica montana stimulates extracellular matrix gene expression in human macrophages differentiated to wound-healing phenotype. Tested on 5 concentrations. |
| GSE77382 |
Arnica montana stimulates extracellular matrix gene expression in human macrophages differentiated to wound-healing phenotype. |
| GSE77401 |
Modulated expression of specific tRNA species drives cancer progression |
| GSE77484 |
miR-seq to define mature miRNAs in human HEK293T cells that are targeted for degradation by the endonuclease Tudor-SN (i.e. by TumiD). |
| GSE77526 |
MNase-seq analysis in human breast cancer cells |
| GSE77553 |
Capturing pairwise and multi-way chromosomal conformations using C-walks |
| GSE77568 |
Inhibition of BET protein BRD4 activity synergizes with cisplatin in ovarian cancer by targeting ALDH activity through an ALDH1A1 super-enhancer and the associated enhancer RNA |
| GSE77841 |
mRNA-seq from Nutlin-3a, doxorubicin, and DMSO treated HCT116 p21-/- cells |
| GSE77901 |
RNA-Seq of SLNCR1 over-expression in the melanoma cell line A375 |
| GSE77902 |
RNA-Seq of siRNA-mediated knockdown of the lncRNA SLNCR1 in WM1976 melanoma cells |
| GSE77903 |
RNA-Seq of over-expression and knockdown of the lncRNA SLNCR1 in melanoma cells |
| GSE78011 |
RNA-Seq Analysis of Anacardic Acid Treated MCF7 and MDA-MB-231 Breast Cancer Cell Lines |
| GSE78138 |
MLL1 is essential for the senescence-associated secretory phenotype [RNA-Seq] |
| GSE78141 |
MLL1 is essential for the senescence-associated secretory phenotype [ChIP-Seq] |
| GSE78142 |
MLL1 is essential for the senescence-associated secretory phenotype |
| GSE78172 |
DSBCapture: in situ capture and direct sequencing of dsDNA breaks |
| GSE78178 |
Effect of BB608 on Gene Expression in HNSCC Cell Line |
| GSE78206 |
H3K4me3 ChIP in multiple myeloma MM1S cells in the presence and absence of KDM5-C70 |
| GSE78212 |
Effect of BB608 on STAT3 DNA Binding in HNSCC Cell Line |
| GSE78262 |
ChIP-seq. analysis of pan-histone 3 acetylation in Romidepsin treated TCam-2 |
| GSE78711 |
Zika Virus Targets Human Cortical Neural Precursors and Attenuates Their Growth |
| GSE78725 |
Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation (RNA-seq) |
| GSE78801 |
Heterotypic nucleosomes and PRC2 drive DIPG oncogenesis |
| GSE78832 |
Ultraefficient irCLIP platform for characterization of protein-RNA interactions |
| GSE78913 |
Tracing Enhancer Networks using Epigenetic Traits (TENET) |
| GSE78957 |
Association with Aurora-A controls N-MYC-dependent promoter escape and pause release of RNA polymerase II during the cell cycle |
| GSE78968 |
Effective Detection of Variation in Single Cell Transcriptome using MATQ-seq |
| GSE79019 |
Dynamic gene regulatory networks of human myeloid differentiation [ATAC-seq] |
| GSE79044 |
Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq] |
| GSE79046 |
Dynamic gene regulatory networks of human myeloid differentiation |
| GSE79128 |
AR and ERG ChIP-seq in presence or absence of PRMT5 |
| GSE79133 |
HEK293 cells 100 cell RNAseq profiling on Illumina NextSeq 500 |
| GSE79134 |
Optimized Approaches for Generation of Integration-free iPSCs from Human Urine-derived Cells with Small Molecules and Autologous Feeder |
| GSE79136 |
A cost effective single cell RNA sequencing approach for the Fluidigm C1 |
| GSE79253 |
BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment [RNA-seq] |
| GSE79271 |
BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment [NET-seq] |
| GSE79280 |
Parental allele specific single-cell transcriptome dynamics reveal incomplete epigenetic reprogramming in human female germ cells |
| GSE79288 |
BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment [ChIP-seq] |
| GSE79290 |
BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment |
| GSE79469 |
Age-dependent pancreatic gene regulation reveals mechanisms governing human β-cell function |
| GSE79544 |
Idiopathic pulmonary fibrosis bronchoalveolar lavage cells RNA-seq indicates macrophage expression of pro-inflammatory M1/M2 activation concomitant with radical species metabolism inhibition |
| GSE79658 |
ChIP-sequencing of prostate cancer cells |
| GSE79734 |
Epigenetic Profile in RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation |
| GSE79736 |
RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation |
| GSE79787 |
small RNA sequencing for identifying hypoxic responsive miRNAs |
| GSE79789 |
miR25/93 mediates the hypoxia-induced immunosuppression by repression of cGAS |
| GSE79804 |
A conserved abundant cytoplasmic long noncoding RNA modulates repression of mRNAs by Pumilio proteins in human cells |
| GSE79833 |
CRIG identifies a novel population of highly phagocytic peritoneal macrophages associated with disease severity in patients with cirrhosis and ascites |
| GSE79834 |
ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage [ChIP-seq] |
| GSE79835 |
ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage [RNA-seq] |
| GSE79836 |
ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage |
| GSE79870 |
H3K27ac ChIP-Seq in REH and 697 |
| GSE79872 |
RNA-sequencing of B-ALL cell lines, REH treated with LNA GapmeRs against four lncRNAs |
| GSE79873 |
Unique long non-coding RNA expression signature in ETV6/RUNX1-driven B-cell precursor acute lymphoblastic leukemia |
| GSE79879 |
Transcriptome analysis of NKG2CBright compared to NKG2CNeg from multigravida decidua samples |
| GSE79920 |
Single-nucleus RNA-seq on undifferentiated human KD3 myoblasts and differentiated myotubes and mononucleated cells. |
| GSE79921 |
ATAC-Seq to investigate the spatial choreography of the accessible genome |
| GSE79989 |
Massively-parallel functional characterization of MAPK1 missense mutants |
| GSE80150 |
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ChIP_RX] |
| GSE80151 |
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ChIP-seq] |
| GSE80152 |
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ATAC-seq] |
| GSE80153 |
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [RNA-seq] |
| GSE80154 |
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma |
| GSE80167 |
Global Mapping of Human RNA-RNA Interactions |
| GSE80212 |
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (scRNA-Seq) |
| GSE80238 |
Gemone-wide changes of epigenetic mark H3K27 trimethylation (H3K27me3) and AR in prostate cancer cells upon the treatment of EZH2 inhibitors [ChIP-seq] |
| GSE80239 |
EZH2 inhibitor-mediated transcriptional profiling in prostate cancer cells [RNA-seq] |
| GSE80240 |
Distinct changes in transcriptional profiles and epigenetic patterns mediated by EZH2 inhibitors in sensitive and insensitive prostate cancer cells |
| GSE80256 |
Grainyhead-like 2 is essential for androgen receptor expression and activity in prostate cancer (ChIP-seq) |
| GSE80264 |
Transcriptome analysis of H9 hESC derived cerebral organoids |
| GSE80306 |
Aging-related virtually naïve memory T (TVNM) cells: a new stage in T cell response to persistent infections in humans |
| GSE80333 |
Spatial proximity to fibroblasts impacts molecular features and therapeutic sensitivity of breast cancer cells influencing clinical outcomes |
| GSE80372 |
A splicing switch of TEAD4 regulates Hippo-YAP signaling pathway to inhibit tumor proliferation |
| GSE80386 |
Integrator complex subunit 12 is a key regulator of human protein synthesis pathways |
| GSE80434 |
Molecular Signatures Associated with ZIKV Exposure in Human Cortical Neural Progenitors |
| GSE80450 |
Grainyhead-like 2 is essential for androgen receptor expression and activity in prostate cancer (RNA-seq) |
| GSE80452 |
Grainyhead-like 2 is essential for androgen receptor expression and activity in prostate cancer |
| GSE80591 |
Messenger RNA expression after MK2206/DMSO treatment of T47D cells |
| GSE80592 |
Genome-wide H3K4me3 after MK2206/DMSO treatment of T47D cells |
| GSE80593 |
Genome-wide KDM5A occupancy after MK2206/DMSO treatment of T47D cells |
| GSE80594 |
PI3K/AKT signaling regulates H3K4 methylation in breast cancer |
| GSE80619 |
T47D xenografts treated with various combinations of ER- and PR-targeting therapies |
| GSE80620 |
Progesterone Receptor Isoforms, Agonists and Antagonists Differentially Reprogram Estrogen Signaling. |
| GSE80661 |
Non-overlapping control of transcriptome by Promoter and Super-Enhancer-Associated Dependencies |
| GSE80705 |
Removable insulator facilitates higher-order chromatin remodeling and selective gene expression in the HOXA locus via the retinoic acid signaling [ChIP-seq] |
| GSE80706 |
Removable insulator facilitates higher-order chromatin remodeling and selective gene expression in the HOXA locus via the retinoic acid signaling |
| GSE80753 |
LSD1 mediates MYCN control of epithelial-mesenchymal transition through silencing of metastatic suppressor NDRG1 gene |
| GSE80774 |
ENL Links Histone Acetylation to Oncogenic Gene Expression in AML |
| GSE80779 |
ENL Links Histone Acetylation to Oncogenic Gene Expression in AML |
| GSE81009 |
Global binding of isoforms of Wilms' Tumor gene 1 and H3K4me3 in K562 cells |
| GSE81076 |
A single-cell transcriptome atlas of the human pancreas |
| GSE81144 |
Gene expression in BRAFV600E thyrocyte |
| GSE81314 |
Shotgun sequencing of 5-hydroxymethylcysotine circulating cell-free DNA from the blood distinguishes solid tumor tissues of origin |
| GSE81345 |
Sensing self and nonself circular RNAs |
| GSE81402 |
Analysis of chromosomal aberrations and recombination by allelic bias in RNA-Seq |
| GSE81412 |
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Bulk RNA-Seq validation |
| GSE81482 |
ChIP-seq for identifying molecules associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors |
| GSE81483 |
Methylation profiling study by MBD-seq for identifying genes associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors |
| GSE81484 |
Gene expression profiling study by RNA-seq for identifying genes associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors |
| GSE81485 |
An extensive program of periodic alternative splicing linked to cell cycle progression |
| GSE81486 |
Expression profiling by small RNA-seq for identifying miRNA associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors |
| GSE81487 |
Epithelial-mesenchymal transition and acquired resistance to ALK inhibitors |
| GSE81493 |
An interaction with Ewing's sarcoma breakpoint protein EWS defines the specific oncogenic mechanism of ETS factors rearranged in prostate cancer |
| GSE81497 |
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma [Let7Targets] |
| GSE81498 |
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma [longRNA] |
| GSE81499 |
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma [shortRNA] |
| GSE81500 |
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma |
| GSE81540 |
Clinical Value of RNA Sequencing–Based Classifiers for Prediction of the Five Conventional Breast Cancer Biomarkers: A Report From the Population-Based Multicenter Sweden Cancerome Analysis Network—Breast Initiative [superseries] |
| GSE81547 |
Single cell transcriptome analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns. |
| GSE81600 |
A long noncoding RNA regulates sister chromatid cohesion [ChIP-seq] |
| GSE81602 |
A long noncoding RNA regulates sister chromatid cohesion |
| GSE81620 |
Next Generation Sequencing Facilitates Quantitative Analysis of miR-29b-1 and miR-29a targets in tamoxifen-sensitive and tamoxifen-resistant human breast cancer cells |
| GSE81637 |
Transcriptome analysis of virus infected tissues |
| GSE81698 |
Epigenetic targeting of immunocheckpoint PD-L1 by BET bromodomain inhibition |
| GSE81730 |
Single cell gene expression profiling in normal HSCs and CML stem cells |
| GSE81747 |
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (pooled infection) |
| GSE81748 |
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) |
| GSE81749 |
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq TNF-alpha treatment versus mock |
| GSE81750 |
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of 15 SEs, 71 HSs, 241 sgRNAs |
| GSE81795 |
An epigenetic mark of polycomb response elements implemented by Trx/MLL/COMPASS |
| GSE81839 |
SIRT7 is an RNA-activated protein lysine deacylase [RIP ribosomal RNA] |
| GSE81840 |
SIRT7 is an RNA-activated protein lysine deacylase [RIP-seq ribo-zero] |
| GSE81841 |
SIRT7 is an RNA-activated protein lysine deacylase |
| GSE81881 |
Genetic variants alter T-bet binding and gene expression in mucosal inflammatory disease |
| GSE81884 |
Multiplexed engineering and analysis of endogenous enhancer activity in single cells |
| GSE81942 |
PRMT1 and CSNK1a1 control epidermal progenitor maintenance |
| GSE81951 |
Evaluation of the immunogenicity of live-attenuated influenza vaccines in nasal epithelial cells in primary differentiated human nasal epithelial cells [RNA-Seq] |
| GSE81969 |
Mapping H4K20me3 onto the chromatin landscape of senescent cells indicates a function in control of cell senescence and tumor suppression through preservation of genetic and epigenetic stability. |
| GSE81978 |
Effect of SF3B1 suppression in cancer cells with different SF3B1 copy-number levels |
| GSE82032 |
Human basal-like breast cancer cell line HCC1143 treated with BET inhibitor JQ1 in combination with MEK inhibitor Trametinib or PI3K/mTOR inhibitor BEZ235 |
| GSE82061 |
Position effects influence HIV provirus latency reversal |
| GSE82104 |
Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells (part of study on PANC1 cells treated with CoCl2) |
| GSE82110 |
Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells (part of study on HepG2) |
| GSE82116 |
Transcription control by the ENL YEATS domain in acute leukemia [ChIP-seq] |
| GSE82117 |
Transcription control by the ENL YEATS domain in acute leukemia [RNA-seq] |
| GSE82118 |
Transcription control by the ENL YEATS domain in acute leukemia |
| GSE82147 |
Genome wide impact of loss of mechanoluminal stimulation on neonatal intestine |
| GSE82236 |
Whole-transcriptome profilings between a pair of HCA7-derived KRAS-wildtype cetuximab sensitive and resistant colon cancer cells from 3D culture |
| GSE82299 |
Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells |
| GSE82330 |
INO80 governs super-enhancer-mediated oncogenic transcription and tumor growth in melanoma [ATAC-seq] |
| GSE82332 |
INO80 governs super-enhancer-mediated oncogenic transcription and tumor growth in melanoma [ChIP-seq_NextSeq] |
| GSE82333 |
INO80 governs super-enhancer-mediated oncogenic transcription and tumor growth in melanoma [RNA-seq] |
| GSE82334 |
INO80 governs super-enhancer-mediated oncogenic transcription and tumor growth in melanoma |
| GSE83126 |
Effect of 48h treatment with 100nM GSK2879552 on T-ALL cell lines LOUCY and PEER |
| GSE83128 |
Oncogenic ZEB2 activation drives sensitivity towards LSD1 inhibition in T-cell acute lymphoblastic leukemia |
| GSE83285 |
Evaluation of the immunogenicity of live-attenuated influenza vaccines in nasal epithelial cells in primary differentiated human nasal epithelial cells |
| GSE83296 |
Genome-wide characterization of mammalian promoters with distal enhancer functions |
| GSE83402 |
Benchmarking of RNA-sequencing analysis workflows using whole-transcriptome RT-qPCR expression data |
| GSE83419 |
ChIP-seq analysis of Guanylate Cyclase Soluble Subunit Beta-3 (GUCY1B3 or sGCβ1) binding to chromatin DNA |
| GSE83427 |
Assay for Transposase-Accessible Chromatin with high throughput sequencing (ATAC-Seq) reveals lncRNA MANTIS important for the angiogenic function of endothelial cells |
| GSE83549 |
RNA-seq characterization of downstream effects of upregulating SMN2 via down-regulating PRC2 or blocking the PRC2:SMN-AS1 interaction with a mixmer oligonucleotide |
| GSE83560 |
Gene expression profiling of papillary thyroid cancer from central and invasive regions |
| GSE83660 |
High Resolution Mapping of RNA Polymerases Identifies Mechanisms of Sensitivity and Resistance to BET Inhibitors in t(8;21) AML |
| GSE83671 |
MLL-AF4 Spreading Identifies Binding Sites that Are Distinct from Super-Enhancers and that Govern Sensitivity to DOT1L Inhibition in Leukemia. |
| GSE83719 |
Transcriptome profiling of hematopoietic cells derived from human pluripotent stem cells |
| GSE83724 |
PAX3-FOXO1 requires BRD4 to drive oncogene addiction in RMS cells [RNA-seq] |
| GSE83725 |
PAX3-FOXO1 establishes myogenic super enhancers and recruits BRD4 de novo [7250 ChIP-seq] |
| GSE83726 |
PAX3-FOXO1 establishes myogenic super enhancers [RMS Chip-seq] |
| GSE83727 |
Chromatin looping evidence between PAX3-FOXO1 bound super enhancer and MYOD1 promoter [4C-seq] |
| GSE83728 |
Epigenetic Lanscape and BRD4 Transcriptional Dependency of PAX3-FOXO1 Driven Rhabdomyosarcoma |
| GSE83772 |
The FAM46C gene encodes a non-canonical poly(A) polymerase and acts as an onco-suppressor in multiple myeloma |
| GSE83794 |
Next-generation Sequencing (NGS) identified genome-wide profiles of piwi-interacting RNAs (piRNAs) in human Epithelial Ovarian Cancers (EOCa) |
| GSE83894 |
A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity |
| GSE83905 |
RNA-seq analysis of mRNAs immunoprecipitated by wild-type (WT) or phospho-mimetic (S200D) FLAG-LIN28A in PA1 cells |
| GSE83906 |
RNA-seq analysis of mRNAs immunoprecipitated by wild-type (WT), phospho-mimetic (S200D), or phospho-null (S200A) FLAG-LIN28A |
| GSE83925 |
Regulation of PRDM1 (PRDBF-1/BLIMP1) isoform expression in T cells by an Inflammatory Bowel Disease -associated polymorphism |
| GSE83945 |
Genome-wide profiling of mature piRNAs in human Neuroblastoma (NB) cell lines |
| GSE83968 |
The non-coding variant rs1800734 enhances DCLK3 expression through long-range interaction and promotes colorectal cancer progression |
| GSE83990 |
Zone dependent distinctive gene expression profile of the normal human liver tissue |
| GSE84052 |
RAG1 targeting in the genome is dominated by chromatin interactions mediated by the non-core regions of RAG1 and RAG2 |
| GSE84068 |
Post-transcriptional 3’UTR cleavage of mRNA transcripts generates thousands of stable uncapped autonomous RNA fragments |
| GSE84114 |
Profiling in vivo Bone Lesion and ex vivo Bone-In-Culture Array Samples by Next-Generation Sequencing |
| GSE84188 |
Ebolavirus species associated with differential pathogenicity induce distinct host responses in human macrophages |
| GSE84287 |
A novel method for genome-wide profiling of poly(A)-tail lengths |
| GSE84336 |
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [Toxin] |
| GSE84338 |
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells |
| GSE84352 |
Read-through transcription as a general mechanism mediating methylation and silencing of intragenic CGIs [H3K36me3_ChIP-seq] |
| GSE84355 |
Read-through transcription as a general mechanism mediating methylation and silencing of intragenic CGIs |
| GSE84389 |
Network-based, cross-cohort discovery of transcriptional mechanisms presiding over maintenance of high-risk neuroblastoma subtype state |
| GSE84405 |
ARID1A-mutated ovarian cancers depend on HDAC6 activity |
| GSE84465 |
Single-Cell RNAseq analysis of diffuse neoplastic infiltrating cells at the migrating front of human glioblastoma |
| GSE84471 |
A Druggable TCF4- and BRD4-dependent Transcriptional Network Sustains Malignancy in Blastic Plasmacytoid Dendritic Cell Neoplasm (RNA-Seq) |
| GSE84504 |
Modeling Trilateral Retinoblastoma using Human Embryonic Stem Cells |
| GSE84618 |
Dysregulation of the epigenetic landscape of normal aging in Alzheimer's disease [ChIP-Seq] |
| GSE84623 |
A Druggable TCF4- and BRD4-dependent Transcriptional Network Sustains Malignancy in Blastic Plasmacytoid Dendritic Cell Neoplasm (ATAC-Seq) |
| GSE84628 |
ChIP-seq of Active Histone Mark (H3K27ac) and Myogenic Regulatory Factors (MYF5 and MYOD) in Fusion Negative Rhabdomyosarcoma Cell Lines |
| GSE84630 |
Fusion Negative Rhabdomyosarcoma Cell Lines |
| GSE84657 |
Dynamic and stable enhancer-promoter contacts regulate terminal differentiation [ChIP-Seq] |
| GSE84662 |
Dynamic and stable enhancer-promoter contacts regulate terminal differentiation |
| GSE84675 |
Effect of BCL11B overexpression on transcriptome of T-cell acute lymphoblastic leukemia (T-ALL) cells |
| GSE84677 |
BCL11B DNA binding sites in progenitor and differentiated populations in the human thymus |
| GSE84678 |
BCL11B |
| GSE84683 |
Differential expression analysis of RNA-seq data from melanocytes driven by tumor cell-derived exosomes |
| GSE84686 |
Innate to adaptive: Human IFN-gamma producing CD4+ T cells can derive directly from CXCL8-producing recent thymic emigrants. |
| GSE84706 |
Experimental validation of candidate regulators of KRAS transcriptional components. |
| GSE84865 |
Ebola virus glycoprotein variant with increased infectivity for human cells dominated the 2013-2016 outbreak |
| GSE84869 |
H3K36me2 occupancy profiling by high throughput sequencing from control and WHSC1 knockdown PC3 cells. |
| GSE84877 |
Effect of from Human Umbilical Vein Endothelial Cells |
| GSE84891 |
Expression analysis of the TAF1 syndrome |
| GSE84897 |
Genome-wide analysis of DNA hydroxymethylation and methylation during epstein-barr virus infection. |
| GSE85020 |
Epigenetic silencing of the tumor suppressor RASSF4 favors multiple myeloma progression |
| GSE85057 |
HMGB2 orchestrates the chromatin landscape of senescence-associated secretory phenotype gene loci. |
| GSE85066 |
In vitro cultured H7 human embryonic stem cells (WiCell) and H7-derived downstream early mesoderm progenitors |
| GSE85075 |
Next-Generation Sequencing identified piRNA profiles in healthy and Alzheimer’s-affected human brain |
| GSE85081 |
Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes [ChIP-Seq] |
| GSE85082 |
Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes [RNA-Seq PROLIF-SEN] |
| GSE85083 |
Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes [RNA-Seq siRNA H2A.Z] |
| GSE85085 |
Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes |
| GSE85089 |
Integrator orchestrates RAS/ERK1/2 signaling transcriptional programs |
| GSE85111 |
inDrop single cell RNA-seq of hematopoietic cells derived from human pluripotent stem cells |
| GSE85112 |
Hematopoietic Stem and Progenitor Cells from Human Pluripotent Stem Cells via Transcription Factor Conversion of Hemogenic Endothelium |
| GSE85117 |
INO80 is required for oncogenic transcription and tumor growth in non-small cell lung cancer [ChIP-seq] |
| GSE85118 |
INO80 is required for oncogenic transcription and tumor growth in non-small cell lung cancer [RNA-seq] |
| GSE85119 |
INO80 is required for oncogenic transcription and tumor growth in non-small cell lung cancer |
| GSE85161 |
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [RNA-Seq] |
| GSE85164 |
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome |
| GSE85169 |
MEK inhibition profoundly reprograms myogenic super enhancers in mutant-RAS driven Rhabdomyosarcoma |
| GSE85170 |
MEK inhibition rewires enhancer landscapes in RAS-driven Rhabdomyosarcoma to unlock a myogenic differentation block |
| GSE85171 |
Epigenetic Reprogramming of mutant RAS-driven Rhabdomyosarcoma via MEK Inhibition |
| GSE85241 |
A single-cell transcriptome atlas of the human pancreas [CEL-seq2] |
| GSE85246 |
Epigenome maps of time-resolved monocyte to macrophage differentiation and innate immune memory |
| GSE85315 |
Genome-wide changes in H3K4me3 after MEN1 silencing in MCF-7 cells |
| GSE85317 |
Analysis of genome-wide occupancy of menin, MLL1 and MLL2 in MCF-7 cells |
| GSE85337 |
Natural Selection has Shaped Coding and Non-coding Transcription in Primate CD4+ T-cells |
| GSE85455 |
ADAR1 controls apoptosis of stressed cells by inhibiting Staufen-mediated mRNA decay |
| GSE85575 |
An automatec microwell platform for large-scale single cell RNA-seq. |
| GSE85610 |
Gene expression profiles in response to proanthocyanidins in pancreatic cancer cells |
| GSE85699 |
Serum miR-122-5p and miR-206 expression: Non-invasive prognostic biomarkers for renal cell carcinoma |
| GSE85853 |
Chromatin accessibility landscape of cutaneous T cell lymphoma and dynamic response to HDAC inhibitors |
| GSE85886 |
Epigenome Mapping in pancreatic cancer cells |
| GSE85987 |
Inhibition of endothelial Notch signaling attenuates inflammation |
| GSE85988 |
MLL-AF4 binds directly to a BCL-2 specific enhancer and impacts H3K27 acetylation |
| GSE85995 |
Function and hormonal regulation of GATA3 in human first trimester placentation |
| GSE86153 |
Identification of extensive cellular diversity and maturation of active neuronal networks in long-term cultures of human brain organoids |
| GSE86154 |
O-GlcNAc Aminidase is an RNA Pol II Elongation Factor Coupled to Pausing Factors SPT5 and TIF1b |
| GSE86232 |
ERK potentiates transactivation and oncogenic function of ERG by phosphorylation induced dissociation of PRC2 complex |
| GSE86238 |
Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2 |
| GSE86239 |
Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2 |
| GSE86240 |
Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2 |
| GSE86244 |
Early Chronological Aging in Human Adipose-Derived Stem Cells Marked by Distinct Transcriptional Regulation Compared to Differentiated Cells |
| GSE86316 |
Messenger RNA expression after silencing or inhibition of MEN1in MCF-7 breast cancer cells |
| GSE86393 |
Direct and tissue-specific assessment of the damaging potential of regulatory SNPs |
| GSE86468 |
Single cell transcriptomics defines human islet cell signatures and reveals cell-type-specific expression changes in type 2 diabetes [bulk] |
| GSE86469 |
Single cell transcriptomics defines human islet cell signatures and reveals cell-type-specific expression changes in type 2 diabetes [single cell] |
| GSE86473 |
Single cell transcriptomics defines human islet cell signatures and reveals cell-type-specific expression changes in type 2 diabetes |
| GSE86538 |
ChIP-seq of ER and RUNX2 in MCF7 breast cancer cell lines |
| GSE86556 |
The 3’-UTR of MYC couples RNA polymerase II function to ribonucleotide levels |
| GSE86618 |
Single Cell RNA-Sequencing Identifies Diverse Roles of Epithelial Cells in Idiopathic Pulmonary Fibrosis |
| GSE86644 |
Ultrasound-mediated ultra effective cellular reprogramming of human fibroblasts into neural progenitor-like cells [RNA-Seq] |
| GSE86646 |
An ultra effective method of generating extra multipotent cells from human fibroblasts via ultrasound-directed instant chromatin remodeling |
| GSE86810 |
Genome-wide histone modification profiling in endometriosis cells |
| GSE86855 |
A cytoplasmic COMPASS is necessary for cell survival and triple-negative breast cancer pathogenesis by regulating metabolism |
| GSE86857 |
A total RNA-Seq screen reveals that the splicing inhibitor Isoginkgetin blocks transcription elongation |
| GSE86864 |
ChIP-seq analysis of H3K27ac in K562 cells with shRNA-mediated depeltion of TFAM expression |
| GSE86910 |
RNA-seq transcriptonal profiling in human primary adult erythroid progenitor cells (ProEs) after shRNA-mediated depletion of TFAM and PHB2 expression |
| GSE86912 |
Quantitative Proteomic and Transcriptomic Analysis Reveals Post-Transcriptional Regulation of Mitochondrial Biogenesis during Erythropoiesis |
| GSE87039 |
Genomic and proteomic resolution of heterochromatin and its restriction of alternate fate genes (ChIP-seq) |
| GSE87040 |
Genomic and proteomic resolution of heterochromatin and its restriction of alternate fate genes (RNA-seq) |
| GSE87041 |
Genomic and proteomic resolution of heterochromatin and its restriction of alternate fate genes |
| GSE87055 |
Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq_siRNA] |
| GSE87114 |
Dynamic gene regulatory networks of human myeloid differentiation [ATAC-seq_siRNA] |
| GSE87205 |
Ultrasound-mediated ultra effective cellular reprogramming of human fibroblasts into neural progenitor-like cells |
| GSE87218 |
Epigenome maps of time-resolved monocyte to macrophage differentiation and innate immune memory (ATAC-Seq) |
| GSE87273 |
C9/ALS Human Embryonic Stem Cells and C9/ALS Induced Pluripotent Stem Cells |
| GSE87281 |
SMN deficiency in spinal muscular atrophy causes widespread intron retention and DNA damage |
| GSE87328 |
eIF1 modulates the recognition of sub-optimal translation start sites and steers gene expression control mediated by uORFs |
| GSE87392 |
Comparison of Eomes-negative and Eomes-positive human liver NK cells by RNASeq |
| GSE87418 |
Enhancer Remodeling During Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacological Targeting of the P-TEFb Complex (ChIP-seq) |
| GSE87419 |
Enhancer Remodeling During Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacological Targeting of the P-TEFb Complex (RNA-seq) |
| GSE87424 |
Enhancer Remodeling During Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacological Targeting of the P-TEFb Complex |
| GSE87476 |
Mitotic Transcription and Waves of Gene Reactivation During Mitotic Exit |
| GSE87517 |
Immune escape in breast cancer during in situ to invasive carcinoma transition |
| GSE87532 |
Tristetraprolin disables prostate cancer maintenance by impairing proliferation and metabolic function |
| GSE87552 |
Inhibition of endothelial Notch signaling attenuates inflammation [ChIP-Seq] |
| GSE87563 |
RNAseq of normal associate fibroblasts after treatment with large oncosomes from prostate cancer cells |
| GSE87577 |
Transcriptional study of ARN8 cells treated with novel DHODH inhibitors |
| GSE87607 |
R-loops promote antisense transcription across the mammalian genome |
| GSE87767 |
mRNA cap methyltransferase, RNMT-RAM, promotes RNA pol II transcription |
| GSE87785 |
Sequencing-based analyses characterize a tumor suppressive role of mir-1271 repressed by DNA hypermethylation in gastric cancer |
| GSE87949 |
small RNA-seq from stomach (ENCSR003SZJ) |
| GSE87959 |
small RNA-seq from subcutaneous adipose tissue (ENCSR020VES) |
| GSE87965 |
small RNA-seq from ovary (ENCSR024CRN) |
| GSE87976 |
small RNA-seq from body of pancreas (ENCSR033TKS) |
| GSE88019 |
small RNA-seq from Peyer's patch (ENCSR091JNF) |
| GSE88027 |
small RNA-seq from body of pancreas (ENCSR099ACU) |
| GSE88057 |
small RNA-seq from stomach (ENCSR133GQJ) |
| GSE88079 |
small RNA-seq from transverse colon (ENCSR168XPO) |
| GSE88093 |
small RNA-seq from transverse colon (ENCSR183YQY) |
| GSE88103 |
small RNA-seq from tibial nerve (ENCSR203DPX) |
| GSE88123 |
small RNA-seq from prostate gland (ENCSR227FNZ) |
| GSE88124 |
small RNA-seq from testis (ENCSR229WIW) |
| GSE88128 |
small RNA-seq from esophagus muscularis mucosa (ENCSR233DGJ) |
| GSE88146 |
small RNA-seq from esophagus squamous epithelium (ENCSR262TBN) |
| GSE88147 |
small RNA-seq from adrenal gland (ENCSR264COY) |
| GSE88153 |
small RNA-seq from gastroesophageal sphincter (ENCSR269YSX) |
| GSE88164 |
small RNA-seq from esophagus squamous epithelium (ENCSR289GGY) |
| GSE88169 |
small RNA-seq from esophagus muscularis mucosa (ENCSR295NAK) |
| GSE88177 |
small RNA-seq from spleen (ENCSR307FBN) |
| GSE88188 |
small RNA-seq from transverse colon (ENCSR316SXP) |
| GSE88197 |
small RNA-seq from prostate gland (ENCSR332RHR) |
| GSE88218 |
small RNA-seq from thyroid gland (ENCSR359CVC) |
| GSE88232 |
small RNA-seq from esophagus squamous epithelium (ENCSR379GPS) |
| GSE88236 |
small RNA-seq from esophagus muscularis mucosa (ENCSR383PLJ) |
| GSE88260 |
small RNA-seq from stomach (ENCSR418FVT) |
| GSE88333 |
small RNA-seq from transverse colon (ENCSR525WFB) |
| GSE88344 |
small RNA-seq from upper lobe of left lung (ENCSR539RDF) |
| GSE88369 |
small RNA-seq from stomach (ENCSR573RGL) |
| GSE88379 |
small RNA-seq from spleen (ENCSR587CPE) |
| GSE88381 |
small RNA-seq from spleen (ENCSR593MVW) |
| GSE88393 |
small RNA-seq from right lobe of liver (ENCSR603XUX) |
| GSE88399 |
small RNA-seq from omental fat pad (ENCSR610GDH) |
| GSE88404 |
small RNA-seq from adrenal gland (ENCSR612WDT) |
| GSE88414 |
small RNA-seq from testis (ENCSR626GVP) |
| GSE88424 |
small RNA-seq from right lobe of liver (ENCSR634VLA) |
| GSE88426 |
small RNA-seq from sigmoid colon (ENCSR635SLB) |
| GSE88432 |
small RNA-seq from gastroesophageal sphincter (ENCSR646HQQ) |
| GSE88490 |
small RNA-seq from Peyer's patch (ENCSR718AXQ) |
| GSE88499 |
small RNA-seq from upper lobe of left lung (ENCSR737NPO) |
| GSE88531 |
small RNA-seq from esophagus squamous epithelium (ENCSR779BVZ) |
| GSE88559 |
small RNA-seq from vagina (ENCSR812JEU) |
| GSE88608 |
small RNA-seq from gastroesophageal sphincter (ENCSR866ZSG) |
| GSE88618 |
small RNA-seq from sigmoid colon (ENCSR880LXP) |
| GSE88619 |
small RNA-seq from sigmoid colon (ENCSR882DFF) |
| GSE88624 |
small RNA-seq from uterus (ENCSR887HNW) |
| GSE88644 |
small RNA-seq from spleen (ENCSR917CQJ) |
| GSE88673 |
small RNA-seq from upper lobe of left lung (ENCSR961FIG) |
| GSE88679 |
small RNA-seq from sigmoid colon (ENCSR968DMR) |
| GSE88694 |
small RNA-seq from upper lobe of left lung (ENCSR996VHB) |
| GSE88695 |
small RNA-seq from gastroesophageal sphincter (ENCSR998CRC) |
| GSE88748 |
Click chemistry enables comprehensive preclinical evaluation of targeted epigenetic therapies [Click-Seq 1] |
| GSE88751 |
Click chemistry enables comprehensive preclinical evaluation of targeted epigenetic therapies |
| GSE88802 |
Novel metastatic models of human esophageal adenocarcinoma highlight the importance of E-cadherin in cancer metastasis |
| GSE88805 |
RNA binding proteins in cancer spliceome |
| GSE88817 |
In situ CAPTURE of chromatin interactions by biotinylated dCas9 |
| GSE88858 |
RNA-Seq gene profiling comparison from human cDC subsets and pre-cDC subsets |
| GSE88894 |
TFEB controls vascular development by regulating the proliferation of endothelial cells (TFEB ChIp-seq) |
| GSE88896 |
TFEB controls vascular development by regulating the proliferation of endothelial cells |
| GSE88942 |
RNA-Seq from early time points in the kidney differentiation protocol |
| GSE88997 |
Reconstituting development of pancreatic intraepithelial neoplasia from primary human pancreas duct cells |
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