GSE68103[Accession] - GEO DataSets - NCBI

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Items: 16

Select item 2000681031.

Multiplex Single Cell Profiling of Chromatin Accessibility by Combinatorial Cellular Indexing

(Submitter supplied) Technical advances have enabled the collection of genome and transcriptome data sets with single-cell resolution. However, single-cell characterization of the epigenome has remained challenging. Furthermore, because cells must be physically separated prior to biochemical processing, conventional single-cell preparatory methods scale linearly. We applied combinatorial cellular indexing to measure chromatin accessibility in thousands of single cells per assay, circumventing the need for compartmentalization of individual cells. more...

Organism:: Mus musculus; Homo sapiens

Type:: Other; Expression profiling by high throughput sequencing

Platforms:: GPL15520 GPL19969 GPL18573
12 Samples

Download data: TXT

Series

Accession:: GSE68103

ID:: 200068103

Select item 1000199692.

Illumina MiSeq (Homo sapiens; Mus musculus)

Organism:: Homo sapiens; Mus musculus

16 Series
21 Samples

Platform

Accession:: GPL19969

ID:: 100019969

Select item 1000185733.

Illumina NextSeq 500 (Homo sapiens)

Organism:: Homo sapiens

12044 Series
332532 Samples

Platform

Accession:: GPL18573

ID:: 100018573

Select item 1000155204.

Illumina MiSeq (Homo sapiens)

Organism:: Homo sapiens

1128 Series
35843 Samples

Platform

Accession:: GPL15520

ID:: 100015520

Select item 3016471265.

Control Experiments Set 3

Organism:: Homo sapiens

Source name:: Mixture of GM12878 and HL-60

Platform:: GPL15520
Series:: GSE67446 GSE68103

Download data: TXT

Sample

Accession:: GSM1647126

ID:: 301647126

SRA Run Selector

Select item 3016471256.

Control Experiments Set 2

Organism:: Homo sapiens

Source name:: Mixture of GM12878 and HL-60

Platform:: GPL15520
Series:: GSE67446 GSE68103

Download data: TXT

Sample

Accession:: GSM1647125

ID:: 301647125

SRA Run Selector

Select item 3016471247.

Control Experiments Set 1

Organism:: Homo sapiens

Source name:: Mixture of GM12878 and HL-60

Platform:: GPL15520
Series:: GSE67446 GSE68103

Download data: TXT

Sample

Accession:: GSM1647124

ID:: 301647124

SRA Run Selector

Select item 3016471238.

GM12878 and HL-60 Mixture

Organism:: Homo sapiens

Source name:: Mixture of GM12878 and HL-60

Platform:: GPL15520
Series:: GSE67446 GSE68103

Download data: TXT

Sample

Accession:: GSM1647123

ID:: 301647123

SRA Run Selector

Select item 3016471229.

GM12878 and HEK293T Mixture

Organism:: Homo sapiens

Source name:: Mixture of GM12878 and HEK293T

Platform:: GPL15520
Series:: GSE67446 GSE68103

Download data: TXT

Sample

Accession:: GSM1647122

ID:: 301647122

SRA Run Selector

Select item 30166300710.

HL-60 RNA-seq Replicate 3

Organism:: Homo sapiens

Source name:: Promyelocytic cell line HL-60

Platform:: GPL18573
Series:: GSE68102 GSE68103

Sample

Accession:: GSM1663007

ID:: 301663007

SRA Run Selector

Select item 30166300611.

HL-60 RNA-seq Replicate 2

Organism:: Homo sapiens

Source name:: Promyelocytic cell line HL-60

Platform:: GPL18573
Series:: GSE68102 GSE68103

Sample

Accession:: GSM1663006

ID:: 301663006

SRA Run Selector

Select item 30166300512.

HL-60 RNA-seq Replicate 1

Organism:: Homo sapiens

Source name:: Promyelocytic cell line HL-60

Platform:: GPL18573
Series:: GSE68102 GSE68103

Sample

Accession:: GSM1663005

ID:: 301663005

SRA Run Selector

Select item 30166300413.

GM12878 RNA-seq Replicate 3

Organism:: Homo sapiens

Source name:: Lymphoblastoid cell line GM12878

Platform:: GPL18573
Series:: GSE68102 GSE68103

Sample

Accession:: GSM1663004

ID:: 301663004

SRA Run Selector

Select item 30166300314.

GM12878 RNA-seq Replicate 2

Organism:: Homo sapiens

Source name:: Lymphoblastoid cell line GM12878

Platform:: GPL18573
Series:: GSE68102 GSE68103

Sample

Accession:: GSM1663003

ID:: 301663003

SRA Run Selector

Select item 30166300215.

GM12878 RNA-seq Replicate 1

Organism:: Homo sapiens

Source name:: Lymphoblastoid cell line GM12878

Platform:: GPL18573
Series:: GSE68102 GSE68103

Sample

Accession:: GSM1663002

ID:: 301663002

SRA Run Selector

Select item 30164712116.

GM12878 and Patski Mixture

Organism:: Homo sapiens; Mus musculus

Source name:: Mixture of GM12878 and Patski mouse embryonic kidney fibroblast cell line

Platform:: GPL19969
Series:: GSE67446 GSE68103

Download data: TXT

Sample

Accession:: GSM1647121

ID:: 301647121

SRA Run Selector

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