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1.

Ubiquitin-dependent turnover of MYC promotes loading of the PAF complex on RNA Polymerase II to drive transcriptional elongation (RNA-seq)

(Submitter supplied) The MYC transcription factor is an unstable protein and its turnover is controlled by the ubiquitin system. Ubiquitination enhances MYC-dependent transactivation, but the underlying mechanism remains unresolved. Here we show that proteasomal turnover of MYC is dispensable for recruitment of RNA polymerase II (RNAPII), but is required to promote transcriptional elongation at MYC target genes. Degradation of MYC stimulates histone acetylation and recruitment of BRD4 and P-TEFb to target promoters, leading to phosphorylation of RNAPII CTD and the release of elongating RNAPII. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL18573 GPL10999
47 Samples
Download data: BEDGRAPH, CSV
Series
Accession:
GSE70000
ID:
200070000
2.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
3.

Illumina Genome Analyzer IIx (Homo sapiens)

Platform
Accession:
GPL10999
ID:
100010999
4.

plus_mg_wt_etoh.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715543
ID:
301715543
5.

plus_mg_wt_dox.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715542
ID:
301715542
6.

plus_mg_swap_etoh.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715541
ID:
301715541
7.

plus_mg_swap_dox.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715540
ID:
301715540
8.

plus_mg_kless_etoh.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715539
ID:
301715539
9.

plus_mg_kless_dox.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715538
ID:
301715538
10.

minus_mg_wt_etoh.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715537
ID:
301715537
11.

minus_mg_wt_dox.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715536
ID:
301715536
12.

minus_mg_swap_etoh.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715535
ID:
301715535
13.

minus_mg_swap_dox.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715534
ID:
301715534
14.

minus_mg_kless_etoh.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715533
ID:
301715533
15.

minus_mg_kless_dox.fastq

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715532
ID:
301715532
16.

siskp2_wt_etoh

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715531
ID:
301715531
17.

siskp2_wt_dox

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715530
ID:
301715530
18.

sictrl_wt_etoh

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715529
ID:
301715529
19.

sictrl_wt_dox

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715528
ID:
301715528
20.

rep2_wt_etoh

Organism:
Homo sapiens
Source name:
IMEC cell line
Platform:
GPL10999
Series:
GSE70000 GSE70009
Download data
Sample
Accession:
GSM1715527
ID:
301715527
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Supplemental Content

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