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Items: 4

1.

Domains of genomewide gene expression dysregulation in Down syndrome

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens; Mus musculus
Type:
Methylation profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
4 related Platforms
42 Samples
Download data: BW, PAIR, TXT
Series
Accession:
GSE55426
ID:
200055426
2.

Domains of genomewide gene expression dysregulation in Down syndrome [array]

(Submitter supplied) Trisomy 21 (T21) is the most frequent genetic cause of cognitive impairment. To assess the perturbations of gene expression in T21, and to eliminate the noise of the genomic variability, we studied the transcriptome of fetal fibroblasts from a pair of monozygotic twins discordant for T21. Here we show that the differential expression between the twins is organized in domains along all chromosomes that are either up- or downregulated. more...
Organism:
Homo sapiens
Type:
Methylation profiling by genome tiling array
Platform:
GPL10559
4 Samples
Download data: PAIR, TXT
Series
Accession:
GSE55289
ID:
200055289
3.

NimbleGen HD2 Human whole genome custom array 2.1M [090310_LP_til_HX1]

(Submitter supplied) Custom made nimblegen array NimbleGen file 090310_LP_til_HX1.ndf linked below as supplementary file. Platform table annotations based on NCBI36 build. Protocol: See manufacturer's website
Organism:
Homo sapiens
12 Series
20 Samples
Download data: NDF
Platform
Accession:
GPL10559
ID:
100010559
4.

T1DS-DamID-Rep2

Organism:
Homo sapiens
Source name:
Dam-only DamID DNA from T1DS fibroblasts (channel 1) Dam-LaminB1 DamID DNA from T1DS fibroblasts (channel 2)
Platform:
GPL10559
Series:
GSE55289 GSE55426
Download data: PAIR, TXT
Sample
Accession:
GSM1333661
ID:
301333661
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