GSM2089844[Accession] - GEO DataSets

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Items: 4

Select item 2000792621.

Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Methylation profiling by genome tiling array; Genome variation profiling by SNP array; Methylation profiling by high throughput sequencing

Platforms:: GPL11154 GPL18952 GPL13534
326 Samples

Download data: BEDGRAPH, IDAT, VCF

Series

Accession:: GSE79262

ID:: 200079262

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000792542.

Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation: genotyping data for the identification of mQTL

(Submitter supplied) Haplotype-dependent allele-specific methylation (hap-ASM) can impact disease susceptibility, but maps of this phenomenon using stringent criteria in disease-relevant tissues remain sparse. Here we apply array-based and Methyl-seq approaches to multiple human tissues and cell types, including brain, purified neurons and glia, T lymphocytes, and placenta, and identify 795 hap-ASM differentially methylated regions (DMRs) and 3,082 strong methylation quantitative trait loci (mQTLs), most not previously reported. more...