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Series GSE79262 Query DataSets for GSE79262
Status Public on Mar 21, 2016
Title Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Genome variation profiling by SNP array
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 27153397
Submission date Mar 15, 2016
Last update date May 15, 2019
Contact name Benjamin Tycko
E-mail(s) bejamintycko@hackensackmeridian.org
Phone 5519963595
Organization name HUMC
Department Epigenetics
Street address 40 prospect avenue
City hackensack
State/province NJ
ZIP/Postal code 07601
Country USA
 
Platforms (3)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
GPL18952 Illumina HumanOmni2.5-8v1.1 beadchip
Samples (326)
GSM2086760 tb6351_Tcells
GSM2086761 tb6598_Tcells
GSM2086762 tb6599_Tcells
This SuperSeries is composed of the following SubSeries:
GSE79144 Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation: Methylation array data for the identification of mQTL
GSE79148 Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation: Methyl-seq data for the identification of hap-ASM
GSE79254 Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation: genotyping data for the identification of mQTL
Relations
BioProject PRJNA315298

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79262_RAW.tar 5.1 Gb (http)(custom) TAR (of BEDGRAPH, IDAT, VCF)
SRA Run SelectorHelp
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