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10422 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL11154
GSE32303	PABPN1 role in regulation of alternative cleavage and polyadenylation	Other	Homo sapiens Mus musculus	19	WIG	Ran Elkon	Apr 15, 2012
GSE35156	Conserved Topological Domains in Mammalian Genomes Identified by High-resolution Analysis of Chromatin Interactions	Other	Homo sapiens Mus musculus	9	TXT SRA Run Selector	Feng Yue	Apr 10, 2012
GSE32340	Reorganization of the host epigenome by a viral oncogene	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	15	BED TXT WIG SRA Run Selector	Siavash K Kurdistani	Apr 05, 2012
GSE36185	mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	WIG SRA Run Selector	David L. Bentley	Apr 05, 2012
GSE36354	Transcriptional Amplification in Tumor Cells with Elevated c-Myc	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	56	WIG YLF SRA Run Selector	Richard A Young	Apr 05, 2012
GSE35126	Effects of Cardiac Glycosides on RNA Expression in Prostate Cancer LNCaP-abl Cells	Expression profiling by high throughput sequencing	Homo sapiens	18	BED TXT SRA Run Selector	Hai-Ri Li	Apr 04, 2012
GSE32268	Role of DNMT3B in the regulation of early neural and neural crest specifiers	Methylation profiling by high throughput sequencing	Homo sapiens	4	BED SRA Run Selector	Janine LaSalle	Mar 28, 2012
GSE33216	Genome-wide maps of H3K4me2 and DNase I hypersensitivity sites in prostate cancer cell line LNCaP and breast cancer cell line MCF-7.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED SRA Run Selector	Housheng Hansen He	Mar 25, 2012
GSE33850	Core transcriptional regulatory circuit controlled by the tal1 complex in human t-cell acute lymphoblastic leukemia (Subseries)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	WIG YLF SRA Run Selector	Richard A Young	Mar 14, 2012
GSE35339	ATRX-mediated chromatin association of histone variant macroH2A1 regulates alpha globin gene expression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED WIG SRA Run Selector	Emily Bernstein	Mar 08, 2012
GSE25882	Genome-wide maps of chromatin state in NCCIT cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	14	BED SAM TXT SRA Run Selector	Inkyung Jung	Mar 07, 2012
GSE31982	Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay	Expression profiling by high throughput sequencing	Escherichia coli Homo sapiens	18	TXT SRA Run Selector	Tarjei S Mikkelsen	Feb 26, 2012
GSE35791	Analysis of H3K79 methylation during reprogramming	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	WIG SRA Run Selector	Amit Sinha	Feb 22, 2012
GSE34995	Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins (RNA-Seq)	Expression profiling by high throughput sequencing	Homo sapiens	31	BOWTIE SRA Run Selector	Gene Yeo	Feb 20, 2012
GSE34996	Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	67	BOWTIE CEL	Gene Yeo	Feb 20, 2012
GSE34491	Nuclear Matrix Factor hnRNP U/SAF-A Exerts a Global Control of Alternative Splicing by Regulating U2 snRNP Maturation	Expression profiling by high throughput sequencing Other	Homo sapiens	4	BED SRA Run Selector	Xiang-Dong Fu	Feb 16, 2012
GSE35268	Analysis of global gene expression profiles of hPAF1 deficient A549 cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	89	BED	ivan marazzi	Feb 15, 2012
GSE34774	PCGF Homologs and RYBP Define Functionally Distinct PRC1 Family Complexes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	BED WIG SRA Run Selector	Roberto Bonasio	Feb 09, 2012
GSE35468	Transcriptome profiling of epidermal differentiation	Expression profiling by high throughput sequencing	Homo sapiens	3	BW SRA Run Selector	Douglas Porter	Feb 02, 2012
GSE32677	Characterization of genome-wide enhancer-promoter interactions reveals co-expression of interacting genes and modes of higher order chromatin organization	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED TXT SRA Run Selector	Iouri Chepelev	Jan 24, 2012