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308 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL11154	Genome binding/occupancy profiling by high throughput sequencing			WIG
GSE232283	H2A.Z histone variants facilitate HDACi-dependent removal of H3.3K27M mutant protein in paediatric high-grade glioma cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	47	TSV WIG	Jakub Mieczkowski	May 01, 2024
GSE38184	Genome-wide mapping of H3K27me3 in Daxx-depleted cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	WIG SRA Run Selector	Hsiu-Ming Shih	Apr 29, 2024
GSE220708	Genome-wide survey by ChIP-seq reveals CREB1 regulation of lncRNAs in gastric cancer.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	WIG XLS XLSX	Peng Gao	Jan 31, 2024
GSE207058	BORIS/CTCFL epigenetically reprograms clustered CTCF binding sites into alternative transcriptional start sites.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	140	BEDGRAPH BIGWIG WIG XLSX	Elena Pugacheva	Jan 03, 2024
GSE186521	Regulatory Enhancer Profiling of Mesenchymal-type Gastric Cancer Reveals Subtype-Specific Epigenomic Landscapes and Targetable Vulnerabilities	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	163	BW RESULTS TXT WIG SRA Run Selector	Shamaine Ho	Aug 16, 2023
GSE210601	RNA Polymerase II CTD is dispensable for transcription in vivo and required for termination	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	31	HIC WIG	Amal Makrini	Jun 21, 2023
GSE187007	G4access identifies G-quadruplexes and their associations with open chromatin and imprinting control regions. Nat Genet (2023). https://doi.org/10.1038/s41588-023-01437-4	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus Saccharomyces cerevisiae	63	BED WIG SRA Run Selector	Amal Makrini	Apr 14, 2023
GSE70702	EZH2 suppresses the interferon-stimulated gene response in non-Hodgkin Lymphoma [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TDF WIG SRA Run Selector	Barbara M Bryant	Jan 06, 2023
GSE70703	EZH2 suppresses the interferon-stimulated gene response in non-Hodgkin Lymphoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	TDF WIG	Barbara M Bryant	Jan 06, 2023
GSE71758	CPI-0610, a potent and selective BET bromodomain inhibitor optimized for clinical development	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TDF WIG SRA Run Selector	Barbara M Bryant	Jan 06, 2023
GSE55740	Analysis of the impact of FOXA1 expression on MDA::ER E2-sensitive transcriptomes and ER cistromes [ChIP-Seq data]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	19	WIG SRA Run Selector	Raphaël Métivier	Dec 11, 2022
GSE55741	Analysis of the impact of FOXA1 expression on MDA::ER E2-sensitive transcriptomes and ER cistromes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	31	PAIR WIG	Raphaël Métivier	Dec 11, 2022
GSE125246	Functional characterization of the clonal hematopoiesis and myeloproliferative neoplasm associated polymorphism rs621940 located downstream of GFI1B	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	WIG SRA Run Selector	Joost Martens	Jan 02, 2022
GSE150506	KMT9 controls growth and stemness of colorectal cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	72	BED WIG	Christopher Berlin	Nov 29, 2021
GSE150527	Comprehensive epigenomic profiling of human alveolar epithelial differentiation identifies key epigenetic states and transcription factor co-regulatory networks for maintenance of distal lung identity	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	48	BIGWIG BW RDS TAB WIG SRA Run Selector	Crystal N Marconett	Oct 27, 2021
GSE152885	Predicting master transcription factors from pan-cancer expression data	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	WIG SRA Run Selector	Richard A Young	Sep 15, 2021
GSE156216	Histone H4 lysine 20 mono-methylation directly facilitates chromatin ‘openness’ and promotes transcription of housekeeping genes (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	18	WIG SRA Run Selector	Mads Lerdrup	Jun 04, 2021
GSE156217	Histone H4 lysine 20 mono-methylation directly facilitates chromatin ‘openness’ and promotes transcription of housekeeping genes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	62	WIG	Mads Lerdrup	Jun 04, 2021
GSE124611	CUL4B ChIP-sequencing in non-treated MDA-MB-231 cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED WIG SRA Run Selector	Yan Wang	Mar 25, 2021
GSE40473	Selective lymphoma cell killing by a PRC2 small molecule inhibitor (ChIP-Seq set 2)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED TDF WIG SRA Run Selector	Barbara M Bryant	Dec 01, 2020