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22 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL11154		Macaca mulatta
GSE142760	GDF11 rejuvenates neural stem cells via Smad2/3-PI3K-AKT-mTOR and reverses aged-dependent cognitive decline	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	184		Hailiang Liu	Dec 31, 2022
GSE120271	RNA-seq and ChIP-seq for human-specific regulation of neural maturation identified by cross-primate transcriptomics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Gorilla Homo sapiens Macaca mulatta Pan paniscus Pan troglodytes	79	BED BEDGRAPH TXT SRA Run Selector	Fred H Gage	Sep 20, 2020
GSE155918	Primate innate immune responses to bacterial and viral pathogens reveals an evolutionary trade-off between strength and specificity	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Pan troglodytes Papio anubis	151	TXT SRA Run Selector	Luis B Barreiro	Aug 09, 2020
GSE130871	Hominin-specific regulatory elements selectively emerged in oligodendrocytes and are disrupted in autism patients	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Pan troglodytes	49	BW NARROWPEAK TXT SRA Run Selector	Menno P Creyghton	Dec 20, 2019
GSE116854	Maintenance of CTCF and transcription factor-mediated interactions from gametes to the early mouse embryo (ATAC-seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	10	WIG SRA Run Selector	Yoonhee Jung	Feb 28, 2019
GSE116857	Maintenance of CTCF and transcription factor-mediated interactions from gametes to the early mouse embryo	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Macaca mulatta Mus musculus	31	WIG	Yoonhee Jung	Feb 28, 2019
GSE106245	Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Pan troglodytes Pongo abelii	55	GTF TAR TSV TXT SRA Run Selector	Andrew Ryan Field	May 31, 2018
GSE57295	Regulatory and evolutionary footprints of messenger RNA secondary structure in primate transcriptomes	Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Homo sapiens Macaca fascicularis Macaca mulatta	22	TXT SRA Run Selector	Qi Zheng	May 01, 2017
GSE85337	Natural Selection has Shaped Coding and Non-coding Transcription in Primate CD4+ T-cells	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes Rattus norvegicus	24	BW SRA Run Selector	Charles G Danko	Dec 29, 2016
GSE71831	Deletion of DXZ4 on the human inactive X chromosome eliminates superdomains and impairs gene silencing	Other Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	101	HIC PDF TSV TXT SRA Run Selector	Miriam Huntley	Jul 19, 2016
GSE67978	Epigenomic annotation of gene regulatory alterations during evolution of the primate brain	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	98	BEDGRAPH BW NARROWPEAK TXT SRA Run Selector	Menno P Creyghton	Jan 13, 2016
GSE69241	Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	27	CUFF SRA Run Selector	Jorge Ruiz-Orera	Sep 01, 2015
GSE63330	DNA methylation in mammalian placentas	Methylation profiling by high throughput sequencing	Bos taurus Canis lupus familiaris Equus caballus Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Saimiri boliviensis	20	TAR SRA Run Selector	Janine LaSalle	Aug 05, 2015
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE60269	Epigenetic modifications are associated with inter-species gene expression variation in primates	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Pan troglodytes	98	BED SRA Run Selector	Xiang Zhou	Nov 09, 2014
GSE60178	Human embryonic stem cell, rhesus embryonic stem cell and mouse transchromosomic (hsa11) embryonic stem cell (with and without ectopic ZNF91 expression) RNA-seq	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	10	XLSX SRA Run Selector	Sofie Salama	Sep 29, 2014
GSE60211	An evolutionary arms race between KRAB zinc finger genes 91/93 and SVA/L1 retrotransposons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	25		Sofie Salama	Sep 29, 2014
GSE49379	Large-scale multi-species survey of metabolome and lipidome	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	120	TSV SRA Run Selector	Jieyi Xiong	May 30, 2014
GSE51264	Conserved expression of lincRNA during human and macaque prefrontal cortex development and maturation	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Macaca mulatta	78	GTF TSV SRA Run Selector	Zhisong He	May 14, 2014
GSE43520	The evolution of lncRNA repertoires and expression patterns in tetrapods	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Gallus gallus Gorilla gorilla Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Ornithorhynchus anatinus Xenopus tropicalis	55	BEDGRAPH TXT SRA Run Selector	Anamaria Necsulea	Jan 19, 2014