GEO Browser - GEO

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52 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL9185				BEDGRAPH
GSE21442	Comprehensive analysis of orphan CpG islands identifes novel promoters with conserved DNA methylation dynamics	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	32	BEDGRAPH SRA Run Selector	Adrian P Bird	Oct 05, 2010
GSE111266	Dnmt1 binds and represses genomic retroelements via DNA methylation in mouse early embryos	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	10	BEDGRAPH	Byungkuk Min	Jul 19, 2020
GSE18578	Genome-wide maps of CFP1, RNA Polymerase II and H3K4me3 in mouse brain.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BEDGRAPH SRA Run Selector	Adrian P Bird	Apr 15, 2010
GSE19786	Neuronal MeCP2 is expressed at near histone-octamer levels and globally alters the chromatin state	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	2	BEDGRAPH SRA Run Selector	Adrian P Bird	Mar 04, 2010
GSE21669	Diverse Targets of the Transcription Factor STAT3 Contribute to T Cell Pathogenicity and Homeostasis [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED BEDGRAPH SRA Run Selector	Golnaz Vahedi	May 30, 2010
GSE21671	Diverse Targets of the Transcription Factor STAT3 Contribute to T Cell Pathogenicity and Homeostasis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BED BEDGRAPH CEL	Golnaz Vahedi	May 30, 2010
GSE22104	Discrete Roles of STAT4 and STAT6 Transcription Factors in Tuning Epigenetic Modifications and Transcription during Helper T Cell Differentiation (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BED BEDGRAPH TXT SRA Run Selector	Golnaz Vahedi	Jun 18, 2010
GSE22105	Discrete Roles of STAT4 and STAT6 Transcription Factors in Tuning Epigenetic Modifications and Transcription during Helper T Cell Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	21	BED BEDGRAPH CEL TXT	Golnaz Vahedi	Jun 18, 2010
GSE22959	Sequencing of the non-ribosomal transcriptome allows the simultaneous identification of protein-coding and non-protein-coding RNAs	Expression profiling by high throughput sequencing	Mus musculus	24	BED BEDGRAPH SRA Run Selector	Florian M Pauler	Dec 06, 2011
GSE23681	Enhanced Pathogenicity of Th17 cells Generated in the Absence of Transforming Growth Factor-β Signaling: ChIPSeq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED BEDGRAPH SRA Run Selector	Lai Wei	Aug 31, 2010
GSE25688	Cell Type-Specific DNA Methylation at Intragenic CpG Islands in the Immune System (MAP-Seq and ChIP-Seq data)	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	10	BEDGRAPH SRA Run Selector	Adrian Bird	May 23, 2011
GSE25689	Cell Type-Specific DNA Methylation at Intragenic CpG Islands in the Immune System	Expression profiling by array Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH	Adrian Bird	May 23, 2011
GSE25897	Paternally-induced transgenerational environmental reprogramming of metabolic gene expression in mammals (small RNA)	Non-coding RNA profiling by high throughput sequencing	Mus musculus	8	BEDGRAPH TXT	naomi habib	Jan 14, 2011
GSE25899	Paternally-induced transgenerational environmental reprogramming of metabolic gene expression in mammals	Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by array	Mus musculus	42	BEDGRAPH CEL GPR TXT	naomi habib	Jan 14, 2011
GSE26552	Genome-wide binding of STAT3 and STAT5 under Th17 conditions (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED BEDGRAPH SRA Run Selector	Golnaz Vahedi	Feb 09, 2011
GSE26553	Opposing regulation of the Il17 locus through direct, reciprocal actions of STAT3 and STAT5	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BEDGRAPH CEL	Golnaz Vahedi	Feb 09, 2011
GSE26602	Genome-Wide And Phase-Specific DNA-Binding Rhythms Of BMAL1 Control Circadian Output Functions In Mouse Liver	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BEDGRAPH SRA Run Selector	Guillaume Rey	Feb 23, 2011
GSE27826	Extensive Chromatin Remodeling and Establishment of Transcription Factor 'Hotspots' during Early Adipogenesis	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED BEDGRAPH SRA Run Selector	Susanne Mandrup	Mar 22, 2011
GSE30584	RNA mapping of Drosha deficient cells, chromatin maps of mature T cells, and miRNA profiling of lymphopoiesis	Non-coding RNA profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	22	BED BEDGRAPH XLS	Mark Chong	Mar 14, 2012
GSE35681	ChIP-seq and mRNA-seq experiment to find the direct target genes of ATF4 and CHOP	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BEDGRAPH RPKM SRA Run Selector	Maureen A Sartor	Apr 11, 2013