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Platform GPL10183 Query DataSets for GPL10183
Status Public on Mar 18, 2010
Title Agilent-015421 TNPRC Macaca mulatta 4x44k Array [Probe Name version]
Technology type spotted oligonucleotide
Distribution custom-commercial
Organisms Macaca mulatta; Homo sapiens
Manufacturer Agilent Technologies
Manufacture protocol Synthesized using SurePrint technology. SurePrint technology allows as many as 8 arrays to reside on a single slide, allowing experiments to range from a genome-wide view to more focused studies. The current microarray was in a 4x44k format. The platform represents one out of the four sub-arrays.
For more info please see the company site: http://www.chem.agilent.com/en-us/products/instruments/dnamicroarrays/pages/gp557.aspx
Catalog number G2519F
Support glass
 
Description 43,803 rhesus macaque monkey probes are represented on this chip.
 
Contributor(s) Mehra S, Kaushal D
Submission date Mar 15, 2010
Last update date Sep 30, 2015
Contact name Deepak Kaushal
E-mail(s) dkaushal@tulane.edu
Organization name Tulane National Primate Research Center
Department Bacteriology
Lab Kaushal
Street address 18703 Three Rivers Rd
City Covington
State/province LA
ZIP/Postal code 38105
Country USA
 
Samples (29) GSM1900045, GSM1900046, GSM1900047, GSM1900048, GSM1900049, GSM1900050 
Series (4)
GSE73654 Mucosal vaccination with attenuated Mycobacterium tuberculosis induces strong central memory responses and protects against tuberculosis
GSE118866 Mycobacterium tuberculosis Sensor Kinase DosS Modulates the Autophagosome in a DosR-independent Manner [I]
GSE118869 Mycobacterium tuberculosis Sensor Kinase DosS Modulates the Autophagosome in a DosR-independent Manner

Data table header descriptions
ID
GB_ACC GenBank Accession number
Gene Annotation (symbol) Curated Gene Descriptions followed by (Symbols)
SEQUENCE

Data table
ID GB_ACC Gene Annotation (symbol) SEQUENCE
A_01_P000001 NM_005588 meprin A, alpha (PABA peptide hydrolase) (MEP1A) AGCAGCACCTCCTCCATGCAGGCCTTATTTTCCCATGGTCAGTGCAGTTTGGGGCAGCTT
A_01_P000002 NM_004407 dentin matrix acidic phosphoprotein (DMP1) AGTATGGTGAGTGCCAAAACAGAGTTATGAACACGATATCTATCTGGAAGCACTGAGAAG
A_01_P000003 NM_006136 capping protein (actin filament) muscle Z-line, alpha 2 (CAPZA2) GGTTTCATTCAATAGAGTATTGCTTATTATACTTGAGTGGAATCCTTTCCTCACATACTC
A_01_P000004 NM_004817 tight junction protein 2 (zona occludens 2) (TJP2) TGCTGCACAAAAGCAGATACTTGAGGAAAACACTATTTCCAAAAGCACGTGTATTGACAA
A_01_P000005 NM_006012 ClpP caseinolytic protease, ATP-dependent, proteolytic subunit homolog (E. coli) (CLPP) TTGAGGAACTTTTAATTTGCAAGGGTGCCCCCTATGGATGGGGCATTCCAGCTGAGACAC
A_01_P000006 NM_001008693 cystatin 9 (testatin) (CST9) GTCTGCGGTTTTATGACTTGGCATTTTAGAAACTCCTCATTGTCCAGGTTCCTCATGTAG
A_01_P000007 NM_181435 C1q and tumor necrosis factor related protein 3 (C1QTNF3) GGGGCCAGGGATATATAAAGATAAATTTGCCTGAGCTCCCATGTCCAAACAATCCTGAAG
A_01_P000008 NM_032888 collagen, type XXVII, alpha 1 (COL27A1) TCCCTCCTGCCTCATCAGGGAAGCAGTACCGCCTGGAAGTTGGACCTGCGTGCTTCCTCT
A_01_P000009 NM_005013 nucleobindin 2 (NUCB2) ATCTATTTCATCTTTTTAGCTCCCTTCCTTTTTCTCTGCTCAATAAATATTTTAAAAGCA
A_01_P000010 NM_001298 cyclic nucleotide gated channel alpha 3 (CNGA3) AGCAACGTACAGGGAGAGCCTTTTAGATTGAAGGCTGGAGTGGTGTCCTAAACCAAAAAA
A_01_P000011 NM_000618 insulin-like growth factor 1 (somatomedin C) (IGF1) AATTTCCCCTGCTACTTTGAAACCAGAAAATAATGACTGGCCATTCATTATATCTGTCTT
A_01_P000012 NM_020064 BarH-like 1 (Drosophila) (BARHL1) CAACCTGAACCCCGGCGCGGCGCTCTACCTGTACCGCGGCCCCAGCGCGCCGCCGCCCGC
A_01_P000013 NM_018158 solute carrier family 4 (anion exchanger), member 1, adaptor protein (SLC4A1AP) TGGTGACTGGCCTTTCCTTCTGTGTTCTTGGCTTCCTAAATTTATCTGCCCATATGATTC
A_01_P000014 XM_497217 60S ribosomal protein L7a (Surfeit locus protein 3) (PLA-X polypeptide) (LOC401640) ATCCGCCGTCACTGGGGCGGCAATGTCCTGGGTCCCAAGTCTGTGGCTCGTATCGCCAAG
A_01_P000015 NM_170665 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 (ATP2A2) GCCAGCAGACATTGTCAGCAAATTAATTGGCAGCAGATTTTAGGAAATGAATGTGTGTGG
A_01_P000016 NM_000498 cytochrome P450, family 11, subfamily B, polypeptide 2 (CYP11B2) CTCATGTGCTCCTAATCCAGCAGAGAGAGTTGACCCCTCCTGAACTGGCCACTCCACAGT
A_01_P000017 NM_153251 zinc finger, DHHC-type containing 20 (ZDHHC20) TAAAAAAGAAGCTTTGTACAGTCCTGGGATCCACAGACGCACTGCTCCAGAGCGGAACGA
A_01_P000018 NM_030803 APG16 autophagy 16-like (S. cerevisiae) (APG16L) TCACGGGCCAGGGCACATCTTTTATTTATTTCGTTATGTTGCCCAACAGAACTTGATTGT
A_01_P000019 NM_000904 NAD(P)H dehydrogenase, quinone 2 (NQO2) GTAAGCAGCACACTAGGAGACCCAGGCGCAGGCAAAGAGAAGACGGTGCTGTCATGAAAT
A_01_P000020 NM_014400 GPI-anchored metastasis-associated protein homolog (C4.4A) ACCGTGCCTTATGCCTGTGTGTGATCAGTTTCTGGCACACAGATGCCTCAATAAAGATTT

Total number of rows: 20217

Table truncated, full table size 2567 Kbytes.




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Supplementary file Size Download File type/resource
GPL10183_full_array.txt.gz 1.0 Mb (ftp)(http) TXT

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